RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 KDF1Q8NAX2 398 aaPredicted RBP11.6□□□□□ -0.55
LINC01243-201ENST00000562065 NR1H3Q13133 447 aa11.59□□□□□ -0.55
LINC01243-201ENST00000562065 LYSMD3Q7Z3D4 306 aa11.59□□□□□ -0.55
LINC01243-201ENST00000562065 ATP5J2-PTCD1G3V325 749 aa11.58□□□□□ -0.56
LINC01243-201ENST00000562065 MEN1O00255 615 aa11.58□□□□□ -0.56
LINC01243-201ENST00000562065 SV2AQ7L0J3 742 aa11.58□□□□□ -0.56
LINC01243-201ENST00000562065 PRICKLE2Q7Z3G6 844 aa11.58□□□□□ -0.56
LINC01243-201ENST00000562065 BANK1Q8NDB2 785 aa11.58□□□□□ -0.56
LINC01243-201ENST00000562065 NANOS1Q8WY41 292 aaKnown RBP11.58□□□□□ -0.56
LINC01243-201ENST00000562065 ZNF330Q9Y3S2 320 aaPredicted RBP11.58□□□□□ -0.56
LINC01243-201ENST00000562065 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
LINC01243-201ENST00000562065 RHOQP17081 205 aa11.57□□□□□ -0.56
LINC01243-201ENST00000562065 RNF20Q5VTR2 975 aa11.57□□□□□ -0.56
LINC01243-201ENST00000562065 MTMR14Q8NCE2 650 aa11.57□□□□□ -0.56
LINC01243-201ENST00000562065 SNRKQ9NRH2 765 aa11.56□□□□□ -0.56
LINC01243-201ENST00000562065 SENP3-EIF4A1A0A087X0R7 540 aa11.55□□□□□ -0.56
LINC01243-201ENST00000562065 APBB1O00213 710 aa11.55□□□□□ -0.56
LINC01243-201ENST00000562065 RNFT1Q5M7Z0 435 aa11.55□□□□□ -0.56
LINC01243-201ENST00000562065 CC2D2BQ6DHV5 1058 aa11.55□□□□□ -0.56
LINC01243-201ENST00000562065 PCDHB11Q9Y5F2 797 aa11.55□□□□□ -0.56
LINC01243-201ENST00000562065 ZNF592Q92610 1267 aa11.54□□□□□ -0.56
LINC01243-201ENST00000562065 ESF1Q9H501 851 aaKnown RBP11.54□□□□□ -0.56
LINC01243-201ENST00000562065 MCCD1P59942 119 aaPredicted RBP11.52□□□□□ -0.57
LINC01243-201ENST00000562065 ERVK-9P63128 1117 aa11.52□□□□□ -0.57
LINC01243-201ENST00000562065 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
LINC01243-201ENST00000562065 NLRP3Q96P20 1036 aa11.52□□□□□ -0.57
LINC01243-201ENST00000562065 A0A1W2PRU2 124 aa11.51□□□□□ -0.57
LINC01243-201ENST00000562065 SCTRP47872 440 aa11.51□□□□□ -0.57
LINC01243-201ENST00000562065 RNF144AP50876 292 aaPredicted RBP11.51□□□□□ -0.57
LINC01243-201ENST00000562065 SVOPQ8N4V2 548 aa11.51□□□□□ -0.57
LINC01243-201ENST00000562065 SLC27A3Q5K4L6 730 aa11.5□□□□□ -0.57
LINC01243-201ENST00000562065 CYP2U1Q7Z449 544 aa11.5□□□□□ -0.57
LINC01243-201ENST00000562065 GPR37L1O60883 481 aa11.49□□□□□ -0.57
LINC01243-201ENST00000562065 CUEDC1Q9NWM3 386 aaPredicted RBP11.49□□□□□ -0.57
LINC01243-201ENST00000562065 SOCS7O14512 581 aa11.48□□□□□ -0.57
LINC01243-201ENST00000562065 RIPOR1Q6ZS17 1223 aa11.48□□□□□ -0.57
LINC01243-201ENST00000562065 ARHGEF10LQ9HCE6 1279 aa11.48□□□□□ -0.57
LINC01243-201ENST00000562065 GPC1P35052 558 aa11.46□□□□□ -0.57
LINC01243-201ENST00000562065 RAB6BQ9NRW1 208 aa11.46□□□□□ -0.57
LINC01243-201ENST00000562065 TBC1D2BQ9UPU7 963 aa11.46□□□□□ -0.57
LINC01243-201ENST00000562065 POU4F2Q12837 409 aa11.45□□□□□ -0.58
LINC01243-201ENST00000562065 ZNF385CQ66K41 422 aaPredicted RBP11.45□□□□□ -0.58
LINC01243-201ENST00000562065 GAS2L1Q99501 681 aaPredicted RBP11.45□□□□□ -0.58
LINC01243-201ENST00000562065 OSBPL3Q9H4L5 887 aa11.45□□□□□ -0.58
LINC01243-201ENST00000562065 ADAMTS8Q9UP79 889 aa11.45□□□□□ -0.58
LINC01243-201ENST00000562065 WHAMMQ8TF30 809 aa11.44□□□□□ -0.58
LINC01243-201ENST00000562065 PRM3Q9NNZ6 103 aa11.44□□□□□ -0.58
LINC01243-201ENST00000562065 CLN3Q13286 438 aa11.43□□□□□ -0.58
LINC01243-201ENST00000562065 GPR25O00155 361 aa11.42□□□□□ -0.58
LINC01243-201ENST00000562065 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
LINC01243-201ENST00000562065 MYCP01106 439 aaPredicted RBP11.42□□□□□ -0.58
LINC01243-201ENST00000562065 ZNF837Q96EG3 531 aaPredicted RBP11.42□□□□□ -0.58
LINC01243-201ENST00000562065 CEP126Q9P2H0 1117 aa11.42□□□□□ -0.58
LINC01243-201ENST00000562065 TRAK2O60296 914 aa11.41□□□□□ -0.58
LINC01243-201ENST00000562065 SLURP2P0DP57 97 aa11.41□□□□□ -0.58
LINC01243-201ENST00000562065 FOXR1Q6PIV2 292 aa11.41□□□□□ -0.58
LINC01243-201ENST00000562065 NBPF10Q6P3W6 841 aaKnown RBP11.4□□□□□ -0.58
LINC01243-201ENST00000562065 TRIM22Q8IYM9 498 aa11.4□□□□□ -0.58
LINC01243-201ENST00000562065 NBPF15Q8N660 670 aa11.4□□□□□ -0.58
LINC01243-201ENST00000562065 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
LINC01243-201ENST00000562065 CDCA7Q9BWT1 371 aaPredicted RBP11.4□□□□□ -0.58
LINC01243-201ENST00000562065 DYRK1BQ9Y463 629 aa11.4□□□□□ -0.58
LINC01243-201ENST00000562065 RNF225M0QZC1 329 aaPredicted RBP11.39□□□□□ -0.59
LINC01243-201ENST00000562065 EIF4G2P78344 907 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC01243-201ENST00000562065 KCNMA1Q12791 1236 aa11.39□□□□□ -0.59
LINC01243-201ENST00000562065 GAS6Q14393 721 aa11.39□□□□□ -0.59
LINC01243-201ENST00000562065 GRIP2Q9C0E4 1043 aa11.39□□□□□ -0.59
LINC01243-201ENST00000562065 MAP3K10Q02779 954 aa11.38□□□□□ -0.59
LINC01243-201ENST00000562065 DBN1Q16643 649 aa11.38□□□□□ -0.59
LINC01243-201ENST00000562065 CNKSR1Q969H4 720 aa11.38□□□□□ -0.59
LINC01243-201ENST00000562065 GTPBP3Q969Y2 492 aaKnown RBP11.38□□□□□ -0.59
LINC01243-201ENST00000562065 TIMMDC1Q9NPL8 285 aa11.38□□□□□ -0.59
LINC01243-201ENST00000562065 H7C1W4 665 aa11.37□□□□□ -0.59
LINC01243-201ENST00000562065 WASLO00401 505 aaPredicted RBP11.37□□□□□ -0.59
LINC01243-201ENST00000562065 GNRH1P01148 92 aa11.37□□□□□ -0.59
LINC01243-201ENST00000562065 MARSP56192 900 aaKnown RBP11.37□□□□□ -0.59
LINC01243-201ENST00000562065 SRSF11Q05519 484 aaKnown RBP11.37□□□□□ -0.59
LINC01243-201ENST00000562065 TAS1R3Q7RTX0 852 aa11.37□□□□□ -0.59
LINC01243-201ENST00000562065 GMCL1Q96IK5 515 aa11.37□□□□□ -0.59
LINC01243-201ENST00000562065 SLFNL1Q499Z3 407 aa11.36□□□□□ -0.59
LINC01243-201ENST00000562065 LYPD4Q6UWN0 246 aa11.36□□□□□ -0.59
LINC01243-201ENST00000562065 DOLKQ9UPQ8 538 aa11.36□□□□□ -0.59
LINC01243-201ENST00000562065 IL2RAP01589 272 aa11.35□□□□□ -0.59
LINC01243-201ENST00000562065 VAC14Q08AM6 782 aa11.35□□□□□ -0.59
LINC01243-201ENST00000562065 RNF135Q8IUD6 432 aa11.35□□□□□ -0.59
LINC01243-201ENST00000562065 TRERF1Q96PN7 1200 aa11.35□□□□□ -0.59
LINC01243-201ENST00000562065 ESYT1Q9BSJ8 1104 aa11.35□□□□□ -0.59
LINC01243-201ENST00000562065 MBIPQ9NS73 344 aa11.35□□□□□ -0.59
LINC01243-201ENST00000562065 SPATA31C2B4DYI2 1134 aa11.34□□□□□ -0.59
LINC01243-201ENST00000562065 ARHGEF15O94989 841 aa11.34□□□□□ -0.59
LINC01243-201ENST00000562065 GTF2E1P29083 439 aaPredicted RBP11.34□□□□□ -0.59
LINC01243-201ENST00000562065 ABL2P42684 1182 aa11.34□□□□□ -0.59
LINC01243-201ENST00000562065 PHKA2P46019 1235 aa11.34□□□□□ -0.59
LINC01243-201ENST00000562065 CENPCQ03188 943 aa11.34□□□□□ -0.59
LINC01243-201ENST00000562065 IRF5Q13568 498 aa11.34□□□□□ -0.59
LINC01243-201ENST00000562065 OXLD1Q5BKU9 147 aa11.34□□□□□ -0.59
LINC01243-201ENST00000562065 TMEM151AQ8N4L1 468 aa11.34□□□□□ -0.59
LINC01243-201ENST00000562065 KCTD17Q8N5Z5 321 aa11.34□□□□□ -0.59
LINC01243-201ENST00000562065 GDPD2Q9HCC8 539 aa11.34□□□□□ -0.59
LINC01243-201ENST00000562065 GDF11O95390 407 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms