RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 EDC4Q6P2E9 1401 aaKnown RBP16.62■□□□□ 0.25
NSMCE1-202ENST00000561960 TFCP2L1Q9NZI6 479 aa16.61■□□□□ 0.25
NSMCE1-202ENST00000561960 MEGF6O75095 1541 aa16.6■□□□□ 0.25
NSMCE1-202ENST00000561960 C5P01031 1676 aa16.59■□□□□ 0.25
NSMCE1-202ENST00000561960 C1QTNF8P60827 252 aa16.59■□□□□ 0.25
NSMCE1-202ENST00000561960 WWC3Q9ULE0 1092 aa16.59■□□□□ 0.25
NSMCE1-202ENST00000561960 NSD2O96028 1365 aa16.58■□□□□ 0.24
NSMCE1-202ENST00000561960 TAF1LQ8IZX4 1826 aa16.58■□□□□ 0.24
NSMCE1-202ENST00000561960 MAP3K19Q56UN5 1328 aa16.57■□□□□ 0.24
NSMCE1-202ENST00000561960 RRS1Q15050 365 aaKnown RBP16.57■□□□□ 0.24
NSMCE1-202ENST00000561960 IP6K1Q92551 441 aa16.57■□□□□ 0.24
NSMCE1-202ENST00000561960 ITGB4P16144 1822 aa16.56■□□□□ 0.24
NSMCE1-202ENST00000561960 POLD1P28340 1107 aa16.56■□□□□ 0.24
NSMCE1-202ENST00000561960 AMPHP49418 695 aa16.56■□□□□ 0.24
NSMCE1-202ENST00000561960 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
NSMCE1-202ENST00000561960 KIF20BQ96Q89 1820 aa16.56■□□□□ 0.24
NSMCE1-202ENST00000561960 YBX3P16989 372 aaKnown RBP eCLIP16.55■□□□□ 0.24
NSMCE1-202ENST00000561960 HOXC9P31274 260 aa16.55■□□□□ 0.24
NSMCE1-202ENST00000561960 TERF2IPQ9NYB0 399 aa16.55■□□□□ 0.24
NSMCE1-202ENST00000561960 TOGARAM1Q9Y4F4 1720 aa16.55■□□□□ 0.24
NSMCE1-202ENST00000561960 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
NSMCE1-202ENST00000561960 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
NSMCE1-202ENST00000561960 CCNL1Q9UK58 526 aaPredicted RBP16.54■□□□□ 0.24
NSMCE1-202ENST00000561960 GIGYF1O75420 1035 aaPredicted RBP16.53■□□□□ 0.24
NSMCE1-202ENST00000561960 SLC27A3Q5K4L6 730 aa16.53■□□□□ 0.24
NSMCE1-202ENST00000561960 ZCRB1Q8TBF4 217 aaKnown RBP16.53■□□□□ 0.24
NSMCE1-202ENST00000561960 COG3Q96JB2 828 aa16.53■□□□□ 0.24
NSMCE1-202ENST00000561960 COL23A1Q86Y22 540 aaPredicted RBP16.52■□□□□ 0.24
NSMCE1-202ENST00000561960 GGNBP2Q9H3C7 697 aa16.52■□□□□ 0.24
NSMCE1-202ENST00000561960 ST20-MTHFSA0A0A6YYL1 179 aa16.51■□□□□ 0.23
NSMCE1-202ENST00000561960 NBPF6Q5VWK0 638 aa16.51■□□□□ 0.23
NSMCE1-202ENST00000561960 NBPF4Q96M43 638 aa16.51■□□□□ 0.23
NSMCE1-202ENST00000561960 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
NSMCE1-202ENST00000561960 ZNF526Q8TF50 670 aaPredicted RBP16.5■□□□□ 0.23
NSMCE1-202ENST00000561960 USP47Q96K76 1375 aa16.49■□□□□ 0.23
NSMCE1-202ENST00000561960 AMIGO3Q86WK7 504 aa16.48■□□□□ 0.23
NSMCE1-202ENST00000561960 SLC16A10Q8TF71 515 aa16.48■□□□□ 0.23
NSMCE1-202ENST00000561960 TESK2Q96S53 571 aa16.48■□□□□ 0.23
NSMCE1-202ENST00000561960 UBR3Q6ZT12 1888 aa16.48■□□□□ 0.23
NSMCE1-202ENST00000561960 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
NSMCE1-202ENST00000561960 PHF14O94880 888 aa16.47■□□□□ 0.23
NSMCE1-202ENST00000561960 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
NSMCE1-202ENST00000561960 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
NSMCE1-202ENST00000561960 HSP90AB2PQ58FF8 381 aa16.45■□□□□ 0.22
NSMCE1-202ENST00000561960 RAPGEF4Q8WZA2 1011 aa16.44■□□□□ 0.22
NSMCE1-202ENST00000561960 MAP2P11137 1827 aaKnown RBP16.43■□□□□ 0.22
NSMCE1-202ENST00000561960 PALLDQ8WX93 1383 aa16.43■□□□□ 0.22
NSMCE1-202ENST00000561960 PKD1L3Q7Z443 1732 aa16.43■□□□□ 0.22
NSMCE1-202ENST00000561960 N4BP2Q86UW6 1770 aaPredicted RBP16.43■□□□□ 0.22
NSMCE1-202ENST00000561960 FYB1O15117 783 aa16.42■□□□□ 0.22
NSMCE1-202ENST00000561960 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
NSMCE1-202ENST00000561960 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
NSMCE1-202ENST00000561960 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
NSMCE1-202ENST00000561960 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
NSMCE1-202ENST00000561960 RTL1A6NKG5 1358 aa16.4■□□□□ 0.22
NSMCE1-202ENST00000561960 CYP27B1O15528 508 aa16.4■□□□□ 0.22
NSMCE1-202ENST00000561960 AK7Q96M32 723 aa16.39■□□□□ 0.21
NSMCE1-202ENST00000561960 PCDH11XQ9BZA7 1347 aa16.39■□□□□ 0.21
NSMCE1-202ENST00000561960 PCDH11YQ9BZA8 1340 aa16.39■□□□□ 0.21
NSMCE1-202ENST00000561960 GRIN3BO60391 1043 aa16.37■□□□□ 0.21
NSMCE1-202ENST00000561960 IGSF1Q8N6C5 1336 aa16.37■□□□□ 0.21
NSMCE1-202ENST00000561960 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
NSMCE1-202ENST00000561960 PIGBQ92521 554 aa16.36■□□□□ 0.21
NSMCE1-202ENST00000561960 GPBP1L1Q9HC44 474 aaPredicted RBP16.36■□□□□ 0.21
NSMCE1-202ENST00000561960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.35■□□□□ 0.21
NSMCE1-202ENST00000561960 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
NSMCE1-202ENST00000561960 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
NSMCE1-202ENST00000561960 INSRP06213 1382 aa16.35■□□□□ 0.21
NSMCE1-202ENST00000561960 FLT4P35916 1363 aa16.35■□□□□ 0.21
NSMCE1-202ENST00000561960 NSD3Q9BZ95 1437 aa16.35■□□□□ 0.21
NSMCE1-202ENST00000561960 KIAA1551Q9HCM1 1747 aa16.34■□□□□ 0.21
NSMCE1-202ENST00000561960 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.2
NSMCE1-202ENST00000561960 TMF1P82094 1093 aa16.33■□□□□ 0.2
NSMCE1-202ENST00000561960 POLR3GLQ9BT43 218 aa16.33■□□□□ 0.2
NSMCE1-202ENST00000561960 CARD14Q9BXL6 1004 aa16.33■□□□□ 0.2
NSMCE1-202ENST00000561960 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
NSMCE1-202ENST00000561960 CGNL1Q0VF96 1302 aa16.32■□□□□ 0.2
NSMCE1-202ENST00000561960 ITPK1Q13572 414 aa16.32■□□□□ 0.2
NSMCE1-202ENST00000561960 CD2APQ9Y5K6 639 aa16.32■□□□□ 0.2
NSMCE1-202ENST00000561960 CICQ96RK0 1608 aaPredicted RBP16.31■□□□□ 0.2
NSMCE1-202ENST00000561960 ADCY9O60503 1353 aa16.31■□□□□ 0.2
NSMCE1-202ENST00000561960 GNPATO15228 680 aa16.31■□□□□ 0.2
NSMCE1-202ENST00000561960 IFFO2Q5TF58 517 aa16.31■□□□□ 0.2
NSMCE1-202ENST00000561960 KIF13BQ9NQT8 1826 aa16.29■□□□□ 0.2
NSMCE1-202ENST00000561960 C4AP0C0L4 1744 aa16.29■□□□□ 0.2
NSMCE1-202ENST00000561960 LOC102724428A0A0B4J2F2 783 aa16.29■□□□□ 0.2
NSMCE1-202ENST00000561960 SIK1P57059 783 aa16.29■□□□□ 0.2
NSMCE1-202ENST00000561960 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
NSMCE1-202ENST00000561960 MYH14Q7Z406 1995 aaKnown RBP16.28■□□□□ 0.2
NSMCE1-202ENST00000561960 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
NSMCE1-202ENST00000561960 FLAD1Q8NFF5 587 aa16.28■□□□□ 0.2
NSMCE1-202ENST00000561960 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
NSMCE1-202ENST00000561960 EYA1Q99502 592 aa16.28■□□□□ 0.2
NSMCE1-202ENST00000561960 TMOD3Q9NYL9 352 aa16.28■□□□□ 0.2
NSMCE1-202ENST00000561960 PCNTO95613 3336 aa16.27■□□□□ 0.2
NSMCE1-202ENST00000561960 MMP10P09238 476 aa16.27■□□□□ 0.2
NSMCE1-202ENST00000561960 BRCA1P38398 1863 aaKnown RBP16.27■□□□□ 0.19
NSMCE1-202ENST00000561960 SPG7Q9UQ90 795 aa16.26■□□□□ 0.19
NSMCE1-202ENST00000561960 PXDNLA1KZ92 1463 aa16.25■□□□□ 0.19
NSMCE1-202ENST00000561960 A0A0G2JLW4 131 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms