RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 PDCL2Q8N4E4 241 aa9.03□□□□□ -0.96
CDH1-203ENST00000561751 PMFBP1Q8TBY8 1022 aa9.03□□□□□ -0.96
CDH1-203ENST00000561751 CDCA7LQ96GN5 454 aa9.03□□□□□ -0.96
CDH1-203ENST00000561751 CDHR5Q9HBB8 845 aa9.03□□□□□ -0.96
CDH1-203ENST00000561751 CCDC39Q9UFE4 941 aa9.03□□□□□ -0.96
CDH1-203ENST00000561751 R3HCC1Q9Y3T6 440 aaKnown RBP9.03□□□□□ -0.96
CDH1-203ENST00000561751 YEATS2Q9ULM3 1422 aa9.03□□□□□ -0.96
CDH1-203ENST00000561751 KDM5CP41229 1560 aa9.03□□□□□ -0.96
CDH1-203ENST00000561751 E9PCH4 1651 aa9.02□□□□□ -0.97
CDH1-203ENST00000561751 CCDC66A2RUB6 948 aa9.02□□□□□ -0.97
CDH1-203ENST00000561751 SMAPO00193 183 aa9.02□□□□□ -0.97
CDH1-203ENST00000561751 SOCS7O14512 581 aa9.02□□□□□ -0.97
CDH1-203ENST00000561751 HSPA2P54652 639 aa9.02□□□□□ -0.97
CDH1-203ENST00000561751 PRSS12P56730 875 aa9.02□□□□□ -0.97
CDH1-203ENST00000561751 KLHL40Q2TBA0 621 aa9.02□□□□□ -0.97
CDH1-203ENST00000561751 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
CDH1-203ENST00000561751 YY1AP1Q9H869 796 aa9.02□□□□□ -0.97
CDH1-203ENST00000561751 KIF14Q15058 1648 aa9.02□□□□□ -0.97
CDH1-203ENST00000561751 USP47Q96K76 1375 aa9.01□□□□□ -0.97
CDH1-203ENST00000561751 MMP14P50281 582 aa9.01□□□□□ -0.97
CDH1-203ENST00000561751 RAB3GAP1Q15042 981 aa9.01□□□□□ -0.97
CDH1-203ENST00000561751 SYCP1Q15431 976 aa9.01□□□□□ -0.97
CDH1-203ENST00000561751 ILDR2Q71H61 639 aa9.01□□□□□ -0.97
CDH1-203ENST00000561751 PACS2Q86VP3 889 aa9.01□□□□□ -0.97
CDH1-203ENST00000561751 CERKQ8TCT0 537 aa9.01□□□□□ -0.97
CDH1-203ENST00000561751 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
CDH1-203ENST00000561751 BCCIPQ9P287 314 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDH1-203ENST00000561751 ZHX1Q9UKY1 873 aaPredicted RBP9.01□□□□□ -0.97
CDH1-203ENST00000561751 DISP3Q9P2K9 1392 aa9□□□□□ -0.97
CDH1-203ENST00000561751 RGS20O76081 388 aa9□□□□□ -0.97
CDH1-203ENST00000561751 NYAP1Q6ZVC0 841 aa9□□□□□ -0.97
CDH1-203ENST00000561751 LRCH3Q96II8 777 aa9□□□□□ -0.97
CDH1-203ENST00000561751 CHMP4BQ9H444 224 aaKnown RBP9□□□□□ -0.97
CDH1-203ENST00000561751 TSR3Q9UJK0 312 aaKnown RBP9□□□□□ -0.97
CDH1-203ENST00000561751 HPS5Q9UPZ3 1129 aa9□□□□□ -0.97
CDH1-203ENST00000561751 RALGAPBQ86X10 1494 aa9□□□□□ -0.97
CDH1-203ENST00000561751 ZNF521Q96K83 1311 aa9□□□□□ -0.97
CDH1-203ENST00000561751 EHBP1L1Q8N3D4 1523 aa9□□□□□ -0.97
CDH1-203ENST00000561751 RICTORQ6R327 1708 aa9□□□□□ -0.97
CDH1-203ENST00000561751 CDK11BP21127 795 aaKnown RBP8.99□□□□□ -0.97
CDH1-203ENST00000561751 DUSP27Q5VZP5 1158 aa8.99□□□□□ -0.97
CDH1-203ENST00000561751 GAS2L3Q86XJ1 694 aa8.99□□□□□ -0.97
CDH1-203ENST00000561751 SUPT6HQ7KZ85 1726 aaKnown RBP8.99□□□□□ -0.97
CDH1-203ENST00000561751 ARHGEF12Q9NZN5 1544 aa8.99□□□□□ -0.97
CDH1-203ENST00000561751 FANCAO15360 1455 aa8.98□□□□□ -0.97
CDH1-203ENST00000561751 SIGLEC1Q9BZZ2 1709 aa8.98□□□□□ -0.97
CDH1-203ENST00000561751 AXDND1Q5T1B0 1012 aaPredicted RBP8.98□□□□□ -0.97
CDH1-203ENST00000561751 HSCBQ8IWL3 235 aa8.98□□□□□ -0.97
CDH1-203ENST00000561751 GZF1Q9H116 711 aaPredicted RBP8.98□□□□□ -0.97
CDH1-203ENST00000561751 KIF3AQ9Y496 699 aa8.98□□□□□ -0.97
CDH1-203ENST00000561751 TTC37Q6PGP7 1564 aa8.98□□□□□ -0.97
CDH1-203ENST00000561751 SPATA31D1Q6ZQQ2 1576 aa8.98□□□□□ -0.97
CDH1-203ENST00000561751 CDK13Q14004 1512 aaKnown RBP8.97□□□□□ -0.97
CDH1-203ENST00000561751 PLIN1O60240 522 aa8.97□□□□□ -0.97
CDH1-203ENST00000561751 TATDN2Q93075 761 aa8.97□□□□□ -0.97
CDH1-203ENST00000561751 OGFRQ9NZT2 677 aa8.97□□□□□ -0.97
CDH1-203ENST00000561751 POGZQ7Z3K3 1410 aa8.97□□□□□ -0.97
CDH1-203ENST00000561751 CLGNO14967 610 aa8.96□□□□□ -0.98
CDH1-203ENST00000561751 IRX3P78415 501 aaPredicted RBP8.96□□□□□ -0.98
CDH1-203ENST00000561751 DNTTIP2Q5QJE6 756 aaKnown RBP8.96□□□□□ -0.98
CDH1-203ENST00000561751 SAMD7Q7Z3H4 446 aa8.96□□□□□ -0.98
CDH1-203ENST00000561751 ZNF830Q96NB3 372 aaPredicted RBP8.96□□□□□ -0.98
CDH1-203ENST00000561751 EFCC1Q9HA90 598 aa8.96□□□□□ -0.98
CDH1-203ENST00000561751 NPDC1Q9NQX5 325 aaPredicted RBP8.96□□□□□ -0.98
CDH1-203ENST00000561751 NPC1L1Q9UHC9 1359 aa8.96□□□□□ -0.98
CDH1-203ENST00000561751 ZFYVE16Q7Z3T8 1539 aa8.95□□□□□ -0.98
CDH1-203ENST00000561751 TULP2O00295 520 aa8.95□□□□□ -0.98
CDH1-203ENST00000561751 SLFN5Q08AF3 891 aa8.95□□□□□ -0.98
CDH1-203ENST00000561751 C20orf194Q5TEA3 1177 aa8.95□□□□□ -0.98
CDH1-203ENST00000561751 TNPO1Q92973 898 aaKnown RBP8.95□□□□□ -0.98
CDH1-203ENST00000561751 CLUAP1Q96AJ1 413 aa8.95□□□□□ -0.98
CDH1-203ENST00000561751 C22orf23Q9BZE7 217 aa8.95□□□□□ -0.98
CDH1-203ENST00000561751 CALCOCO1Q9P1Z2 691 aa8.95□□□□□ -0.98
CDH1-203ENST00000561751 PNMA3Q9UL41 463 aa8.95□□□□□ -0.98
CDH1-203ENST00000561751 PLXNC1O60486 1568 aa8.95□□□□□ -0.98
CDH1-203ENST00000561751 CFAP74Q9C0B2 1584 aa8.95□□□□□ -0.98
CDH1-203ENST00000561751 PER1O15534 1290 aaPredicted RBP8.94□□□□□ -0.98
CDH1-203ENST00000561751 TPM3P06753 285 aa8.94□□□□□ -0.98
CDH1-203ENST00000561751 KCNC4Q03721 635 aa8.94□□□□□ -0.98
CDH1-203ENST00000561751 KIAA2012Q0VF49 1180 aa8.94□□□□□ -0.98
CDH1-203ENST00000561751 EFCAB2Q5VUJ9 269 aa8.94□□□□□ -0.98
CDH1-203ENST00000561751 CTR9Q6PD62 1173 aa8.94□□□□□ -0.98
CDH1-203ENST00000561751 DIAPH3Q9NSV4 1193 aa8.94□□□□□ -0.98
CDH1-203ENST00000561751 RTEL1-TNFRSF6BF6WH68 1400 aa8.94□□□□□ -0.98
CDH1-203ENST00000561751 TROQ12816 1431 aaPredicted RBP8.94□□□□□ -0.98
CDH1-203ENST00000561751 NKTRP30414 1462 aaKnown RBP8.94□□□□□ -0.98
CDH1-203ENST00000561751 MAGI2Q86UL8 1455 aa8.94□□□□□ -0.98
CDH1-203ENST00000561751 PREX1Q8TCU6 1659 aa8.94□□□□□ -0.98
CDH1-203ENST00000561751 FER1L4A9Z1Z3 1794 aa8.94□□□□□ -0.98
CDH1-203ENST00000561751 NBPF26B4DH59 902 aa8.93□□□□□ -0.98
CDH1-203ENST00000561751 UVSSAQ2YD98 709 aa8.93□□□□□ -0.98
CDH1-203ENST00000561751 NUDT18Q6ZVK8 323 aa8.93□□□□□ -0.98
CDH1-203ENST00000561751 TTC13Q8NBP0 860 aa8.93□□□□□ -0.98
CDH1-203ENST00000561751 RGS22Q8NE09 1264 aa8.93□□□□□ -0.98
CDH1-203ENST00000561751 ANKRD7Q92527 254 aa8.93□□□□□ -0.98
CDH1-203ENST00000561751 TIGD1Q96MW7 591 aa8.93□□□□□ -0.98
CDH1-203ENST00000561751 RWDD1Q9H446 243 aaPredicted RBP8.93□□□□□ -0.98
CDH1-203ENST00000561751 SPTLC3Q9NUV7 552 aa8.93□□□□□ -0.98
CDH1-203ENST00000561751 GEMIN8Q9NWZ8 242 aaKnown RBP8.93□□□□□ -0.98
CDH1-203ENST00000561751 KIF16BQ96L93 1317 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms