RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 AMER1Q5JTC6 1135 aaPredicted RBP32.61■■■□□ 2.81
CDR2-202ENST00000561630 TATP17735 454 aaPredicted RBP32.6■■■□□ 2.81
CDR2-202ENST00000561630 NBPF14Q5TI25 921 aa32.59■■■□□ 2.81
CDR2-202ENST00000561630 RGPD3A6NKT7 1758 aaPredicted RBP32.59■■■□□ 2.81
CDR2-202ENST00000561630 RGPD4Q7Z3J3 1758 aa32.59■■■□□ 2.81
CDR2-202ENST00000561630 NCAPD2Q15021 1401 aa32.59■■■□□ 2.81
CDR2-202ENST00000561630 PER1O15534 1290 aaPredicted RBP32.58■■■□□ 2.81
CDR2-202ENST00000561630 PROM2Q8N271 834 aa32.58■■■□□ 2.81
CDR2-202ENST00000561630 NHSQ6T4R5 1651 aa32.58■■■□□ 2.81
CDR2-202ENST00000561630 MAP2P11137 1827 aaKnown RBP32.58■■■□□ 2.81
CDR2-202ENST00000561630 EYA1Q99502 592 aa32.56■■■□□ 2.8
CDR2-202ENST00000561630 NUP188Q5SRE5 1749 aa32.56■■■□□ 2.8
CDR2-202ENST00000561630 EIF4A2Q14240 407 aaKnown RBP32.55■■■□□ 2.8
CDR2-202ENST00000561630 TXNRD1Q16881 649 aa32.53■■■□□ 2.8
CDR2-202ENST00000561630 PCDH11XQ9BZA7 1347 aa32.51■■■□□ 2.79
CDR2-202ENST00000561630 PCDH11YQ9BZA8 1340 aa32.51■■■□□ 2.79
CDR2-202ENST00000561630 SHANK3Q9BYB0 1731 aa32.5■■■□□ 2.79
CDR2-202ENST00000561630 PRIM1P49642 420 aaKnown RBP32.48■■■□□ 2.79
CDR2-202ENST00000561630 SYTL4Q96C24 671 aaPredicted RBP32.46■■■□□ 2.79
CDR2-202ENST00000561630 ANO8Q9HCE9 1232 aaPredicted RBP32.46■■■□□ 2.79
CDR2-202ENST00000561630 CYP27B1O15528 508 aa32.45■■■□□ 2.79
CDR2-202ENST00000561630 IGSF1Q8N6C5 1336 aa32.45■■■□□ 2.78
CDR2-202ENST00000561630 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.44■■■□□ 2.781e-8■□□□□ 9.8
CDR2-202ENST00000561630 NPC1L1Q9UHC9 1359 aa32.44■■■□□ 2.78
CDR2-202ENST00000561630 CC2D1BQ5T0F9 858 aaKnown RBP32.43■■■□□ 2.78
CDR2-202ENST00000561630 SPG7Q9UQ90 795 aa32.43■■■□□ 2.78
CDR2-202ENST00000561630 BTAF1O14981 1849 aa32.42■■■□□ 2.78
CDR2-202ENST00000561630 LRP5O75197 1615 aa32.4■■■□□ 2.78
CDR2-202ENST00000561630 PLEKHG2Q9H7P9 1386 aa32.4■■■□□ 2.78
CDR2-202ENST00000561630 PKD1L3Q7Z443 1732 aa32.39■■■□□ 2.78
CDR2-202ENST00000561630 DOT1LQ8TEK3 1739 aa32.39■■■□□ 2.78
CDR2-202ENST00000561630 MTHFSP49914 203 aa32.37■■■□□ 2.77
CDR2-202ENST00000561630 NKX1-1Q15270 411 aaPredicted RBP32.37■■■□□ 2.77
CDR2-202ENST00000561630 STK32BQ9NY57 414 aa32.37■■■□□ 2.77
CDR2-202ENST00000561630 KAT6BQ8WYB5 2073 aa32.36■■■□□ 2.77
CDR2-202ENST00000561630 IL13P35225 146 aa32.35■■■□□ 2.77
CDR2-202ENST00000561630 SLC15A2Q16348 729 aa32.35■■■□□ 2.77
CDR2-202ENST00000561630 SLC27A3Q5K4L6 730 aa32.35■■■□□ 2.77
CDR2-202ENST00000561630 LRRC4BQ9NT99 713 aa32.35■■■□□ 2.77
CDR2-202ENST00000561630 IFNL2Q8IZJ0 200 aa32.31■■■□□ 2.76
CDR2-202ENST00000561630 PHKG2P15735 406 aa32.3■■■□□ 2.76
CDR2-202ENST00000561630 AEBP1Q8IUX7 1158 aa32.3■■■□□ 2.76
CDR2-202ENST00000561630 MPRIPQ6WCQ1 1025 aa32.29■■■□□ 2.76
CDR2-202ENST00000561630 PAPPAQ13219 1627 aa32.29■■■□□ 2.76
CDR2-202ENST00000561630 CNGB1Q14028 1251 aaPredicted RBP32.28■■■□□ 2.76
CDR2-202ENST00000561630 KDRP35968 1356 aa32.28■■■□□ 2.76
CDR2-202ENST00000561630 PLEKHO1Q53GL0 409 aaPredicted RBP32.27■■■□□ 2.76
CDR2-202ENST00000561630 SULT6B1Q6IMI4 303 aa32.27■■■□□ 2.76
CDR2-202ENST00000561630 PDGFDQ9GZP0 370 aaPredicted RBP32.26■■■□□ 2.75
CDR2-202ENST00000561630 ZNF827Q17R98 1081 aa32.25■■■□□ 2.75
CDR2-202ENST00000561630 AMOTQ4VCS5 1084 aa32.25■■■□□ 2.75
CDR2-202ENST00000561630 SPON1Q9HCB6 807 aa32.25■■■□□ 2.75
CDR2-202ENST00000561630 KCNQ4P56696 695 aa32.24■■■□□ 2.75
CDR2-202ENST00000561630 CCNL1Q9UK58 526 aaPredicted RBP32.24■■■□□ 2.75
CDR2-202ENST00000561630 TOGARAM1Q9Y4F4 1720 aa32.23■■■□□ 2.75
CDR2-202ENST00000561630 PIGBQ92521 554 aa32.23■■■□□ 2.75
CDR2-202ENST00000561630 AKT1S1Q96B36 256 aa32.23■■■□□ 2.75
CDR2-202ENST00000561630 DIAPH1O60610 1272 aaKnown RBP32.22■■■□□ 2.75
CDR2-202ENST00000561630 CASZ1Q86V15 1759 aa32.22■■■□□ 2.75
CDR2-202ENST00000561630 PALLDQ8WX93 1383 aa32.2■■■□□ 2.75
CDR2-202ENST00000561630 LY75O60449 1722 aa32.2■■■□□ 2.75
CDR2-202ENST00000561630 ZNF530Q6P9A1 599 aaPredicted RBP32.2■■■□□ 2.75
CDR2-202ENST00000561630 HSP90AB1P08238 724 aaKnown RBP32.19■■■□□ 2.74
CDR2-202ENST00000561630 SMARCC1Q92922 1105 aaPredicted RBP32.19■■■□□ 2.74
CDR2-202ENST00000561630 TMOD3Q9NYL9 352 aa32.19■■■□□ 2.74
CDR2-202ENST00000561630 DCAF5Q96JK2 942 aa32.18■■■□□ 2.74
CDR2-202ENST00000561630 ZBTB7AO95365 584 aa32.17■■■□□ 2.74
CDR2-202ENST00000561630 COL3A1P02461 1466 aaPredicted RBP32.16■■■□□ 2.74
CDR2-202ENST00000561630 ERVV-2B6SEH9 535 aa32.14■■■□□ 2.74
CDR2-202ENST00000561630 HMOX1P09601 288 aa32.14■■■□□ 2.74
CDR2-202ENST00000561630 ITGB4P16144 1822 aa32.13■■■□□ 2.73
CDR2-202ENST00000561630 HMGB2P26583 209 aaKnown RBP32.13■■■□□ 2.73
CDR2-202ENST00000561630 C1orf141Q5JVX7 400 aa32.13■■■□□ 2.73
CDR2-202ENST00000561630 MTFR1LQ9H019 292 aa32.12■■■□□ 2.73
CDR2-202ENST00000561630 TFCP2L1Q9NZI6 479 aa32.12■■■□□ 2.73
CDR2-202ENST00000561630 KDM6AO15550 1401 aaPredicted RBP32.11■■■□□ 2.73
CDR2-202ENST00000561630 ATF5Q9Y2D1 282 aaPredicted RBP32.11■■■□□ 2.73
CDR2-202ENST00000561630 PPP1R1BQ9UD71 204 aaPredicted RBP32.1■■■□□ 2.73
CDR2-202ENST00000561630 ASAP1Q9ULH1 1129 aa32.1■■■□□ 2.73
CDR2-202ENST00000561630 PNPLA7Q6ZV29 1317 aa32.09■■■□□ 2.73
CDR2-202ENST00000561630 PPP2R1AP30153 589 aa32.09■■■□□ 2.73
CDR2-202ENST00000561630 PTGER2P43116 358 aa32.09■■■□□ 2.73
CDR2-202ENST00000561630 CFAP53Q96M91 514 aa32.07■■■□□ 2.72
CDR2-202ENST00000561630 ATG3Q9NT62 314 aa32.07■■■□□ 2.72
CDR2-202ENST00000561630 LOC102724428A0A0B4J2F2 783 aa32.06■■■□□ 2.72
CDR2-202ENST00000561630 U2SURPO15042 1029 aaKnown RBP32.06■■■□□ 2.72
CDR2-202ENST00000561630 SIK1P57059 783 aa32.06■■■□□ 2.72
CDR2-202ENST00000561630 AKAP4Q5JQC9 854 aa32.06■■■□□ 2.72
CDR2-202ENST00000561630 CABP4P57796 275 aa32.05■■■□□ 2.72
CDR2-202ENST00000561630 SLC16A10Q8TF71 515 aa32.05■■■□□ 2.72
CDR2-202ENST00000561630 SGIP1Q9BQI5 828 aa32.04■■■□□ 2.72
CDR2-202ENST00000561630 QSER1Q2KHR3 1735 aa32.02■■■□□ 2.72
CDR2-202ENST00000561630 MTHFSDQ2M296 383 aaKnown RBP32.01■■■□□ 2.71
CDR2-202ENST00000561630 C5P01031 1676 aa32■■■□□ 2.71
CDR2-202ENST00000561630 NFATC2IPQ8NCF5 419 aa31.99■■■□□ 2.71
CDR2-202ENST00000561630 ATP6V1AP38606 617 aa31.98■■■□□ 2.71
CDR2-202ENST00000561630 COL23A1Q86Y22 540 aaPredicted RBP31.98■■■□□ 2.71
CDR2-202ENST00000561630 NUDCQ9Y266 331 aa31.98■■■□□ 2.71
CDR2-202ENST00000561630 ITPK1Q13572 414 aa31.97■■■□□ 2.71
CDR2-202ENST00000561630 LINC00116Q8NCU8 138 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms