RNA–Protein interactions for RNA: ENST00000561399.5

PKNOX2-214, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 5

Gene PKNOX2, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-214ENST00000561399 EP400Q96L91 3159 aa21.42■■□□□ 1.02
PKNOX2-214ENST00000561399 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
PKNOX2-214ENST00000561399 NUDCQ9Y266 331 aa21.42■■□□□ 1.02
PKNOX2-214ENST00000561399 UPF1Q92900 1129 aaKnown RBP eCLIP21.41■■□□□ 1.02
PKNOX2-214ENST00000561399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.41■■□□□ 1.02
PKNOX2-214ENST00000561399 PCDH11XQ9BZA7 1347 aa21.4■■□□□ 1.02
PKNOX2-214ENST00000561399 PCDH11YQ9BZA8 1340 aa21.4■■□□□ 1.02
PKNOX2-214ENST00000561399 SF3B2Q13435 895 aaKnown RBP21.4■■□□□ 1.02
PKNOX2-214ENST00000561399 MARCH10Q8NA82 808 aaPredicted RBP21.4■■□□□ 1.02
PKNOX2-214ENST00000561399 SPG7Q9UQ90 795 aa21.4■■□□□ 1.02
PKNOX2-214ENST00000561399 SHANK3Q9BYB0 1731 aa21.39■■□□□ 1.01
PKNOX2-214ENST00000561399 FAM182BQ5T319 152 aa21.38■■□□□ 1.01
PKNOX2-214ENST00000561399 SULT6B1Q6IMI4 303 aa21.38■■□□□ 1.01
PKNOX2-214ENST00000561399 PRKRIP1Q9H875 184 aaPredicted RBP21.38■■□□□ 1.01
PKNOX2-214ENST00000561399 U2SURPO15042 1029 aaKnown RBP21.36■■□□□ 1.01
PKNOX2-214ENST00000561399 AMOTQ4VCS5 1084 aa21.36■■□□□ 1.01
PKNOX2-214ENST00000561399 DDX54Q8TDD1 881 aaKnown RBP21.36■■□□□ 1.01
PKNOX2-214ENST00000561399 SBF2Q86WG5 1849 aa21.35■■□□□ 1.01
PKNOX2-214ENST00000561399 PLEKHO1Q53GL0 409 aaPredicted RBP21.34■■□□□ 1.01
PKNOX2-214ENST00000561399 TNS1Q9HBL0 1735 aaKnown RBP21.34■■□□□ 1.01
PKNOX2-214ENST00000561399 ANP32CO43423 234 aa21.33■■□□□ 1.01
PKNOX2-214ENST00000561399 AEBP1Q8IUX7 1158 aa21.33■■□□□ 1.01
PKNOX2-214ENST00000561399 NHSQ6T4R5 1651 aa21.32■■□□□ 1
PKNOX2-214ENST00000561399 TRIM37O94972 964 aa21.31■■□□□ 1
PKNOX2-214ENST00000561399 HMOX1P09601 288 aa21.31■■□□□ 1
PKNOX2-214ENST00000561399 BAG6P46379 1132 aa21.31■■□□□ 1
PKNOX2-214ENST00000561399 U2AF1L5P0DN76 240 aaPredicted RBP21.3■■□□□ 1
PKNOX2-214ENST00000561399 U2AF1Q01081 240 aaKnown RBP eCLIP21.3■■□□□ 1
PKNOX2-214ENST00000561399 BCL11BQ9C0K0 894 aaPredicted RBP21.3■■□□□ 1
PKNOX2-214ENST00000561399 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
PKNOX2-214ENST00000561399 IFNL2Q8IZJ0 200 aa21.29■■□□□ 1
PKNOX2-214ENST00000561399 DOT1LQ8TEK3 1739 aa21.29■■□□□ 1
PKNOX2-214ENST00000561399 CYP27B1O15528 508 aa21.28■■□□□ 1
PKNOX2-214ENST00000561399 C1orf141Q5JVX7 400 aa21.28■■□□□ 1
PKNOX2-214ENST00000561399 KAT6BQ8WYB5 2073 aa21.28■■□□□ 1
PKNOX2-214ENST00000561399 FCHSD2O94868 740 aa21.27■■□□□ 1
PKNOX2-214ENST00000561399 ZNF530Q6P9A1 599 aaPredicted RBP21.27■■□□□ 1
PKNOX2-214ENST00000561399 PNNQ9H307 717 aaKnown RBP21.27■■□□□ 1
PKNOX2-214ENST00000561399 RGPD3A6NKT7 1758 aaPredicted RBP21.27■■□□□ 1
PKNOX2-214ENST00000561399 RGPD4Q7Z3J3 1758 aa21.27■■□□□ 1
PKNOX2-214ENST00000561399 PHKG2P15735 406 aa21.26■□□□□ 0.99
PKNOX2-214ENST00000561399 NKX1-1Q15270 411 aaPredicted RBP21.26■□□□□ 0.99
PKNOX2-214ENST00000561399 APBA3O96018 575 aa21.25■□□□□ 0.99
PKNOX2-214ENST00000561399 NEFMP07197 916 aa21.25■□□□□ 0.99
PKNOX2-214ENST00000561399 RSPH6AQ9H0K4 717 aa21.24■□□□□ 0.99
PKNOX2-214ENST00000561399 PRKAR2BP31323 418 aa21.23■□□□□ 0.99
PKNOX2-214ENST00000561399 GAS2L2Q8NHY3 880 aa21.23■□□□□ 0.99
PKNOX2-214ENST00000561399 ACSBG1Q96GR2 724 aa21.23■□□□□ 0.99
PKNOX2-214ENST00000561399 DCAF5Q96JK2 942 aa21.23■□□□□ 0.99
PKNOX2-214ENST00000561399 BTAF1O14981 1849 aa21.22■□□□□ 0.99
PKNOX2-214ENST00000561399 WDR43Q15061 677 aaKnown RBP eCLIP21.22■□□□□ 0.99
PKNOX2-214ENST00000561399 AKAP4Q5JQC9 854 aa21.22■□□□□ 0.99
PKNOX2-214ENST00000561399 SYTL4Q96C24 671 aaPredicted RBP21.21■□□□□ 0.99
PKNOX2-214ENST00000561399 TOGARAM1Q9Y4F4 1720 aa21.21■□□□□ 0.99
PKNOX2-214ENST00000561399 PLSCR1O15162 318 aa21.2■□□□□ 0.98
PKNOX2-214ENST00000561399 KCNQ2O43526 872 aa21.2■□□□□ 0.98
PKNOX2-214ENST00000561399 PRIM1P49642 420 aaKnown RBP21.2■□□□□ 0.98
PKNOX2-214ENST00000561399 DEFB132Q7Z7B7 95 aa21.19■□□□□ 0.98
PKNOX2-214ENST00000561399 ITGB4P16144 1822 aa21.18■□□□□ 0.98
PKNOX2-214ENST00000561399 ERVV-2B6SEH9 535 aa21.18■□□□□ 0.98
PKNOX2-214ENST00000561399 MTHFSDQ2M296 383 aaKnown RBP21.18■□□□□ 0.98
PKNOX2-214ENST00000561399 EN1Q05925 392 aaPredicted RBP21.17■□□□□ 0.98
PKNOX2-214ENST00000561399 MAPK8IP3Q9UPT6 1336 aa21.17■□□□□ 0.98
PKNOX2-214ENST00000561399 MAP3K5Q99683 1374 aa21.17■□□□□ 0.98
PKNOX2-214ENST00000561399 SCN11AQ9UI33 1791 aa21.17■□□□□ 0.98
PKNOX2-214ENST00000561399 RREB1Q92766 1687 aa21.16■□□□□ 0.98
PKNOX2-214ENST00000561399 KDM6AO15550 1401 aaPredicted RBP21.16■□□□□ 0.98
PKNOX2-214ENST00000561399 CAMKK2Q96RR4 588 aa21.16■□□□□ 0.98
PKNOX2-214ENST00000561399 TMOD3Q9NYL9 352 aa21.16■□□□□ 0.98
PKNOX2-214ENST00000561399 PTF1AQ7RTS3 328 aa21.15■□□□□ 0.98
PKNOX2-214ENST00000561399 GNAT3A8MTJ3 354 aa21.14■□□□□ 0.97
PKNOX2-214ENST00000561399 HMGB2P26583 209 aaKnown RBP21.14■□□□□ 0.97
PKNOX2-214ENST00000561399 MPRIPQ6WCQ1 1025 aa21.14■□□□□ 0.97
PKNOX2-214ENST00000561399 PHACTR3Q96KR7 559 aa21.14■□□□□ 0.97
PKNOX2-214ENST00000561399 ADAMTS7Q9UKP4 1686 aa21.14■□□□□ 0.97
PKNOX2-214ENST00000561399 VIRMAQ69YN4 1812 aaKnown RBP21.13■□□□□ 0.97
PKNOX2-214ENST00000561399 SMARCC1Q92922 1105 aaPredicted RBP21.13■□□□□ 0.97
PKNOX2-214ENST00000561399 CABP4P57796 275 aa21.12■□□□□ 0.97
PKNOX2-214ENST00000561399 EZH2Q15910 746 aaKnown RBP21.12■□□□□ 0.97
PKNOX2-214ENST00000561399 PLEKHF1Q96S99 279 aa21.12■□□□□ 0.97
PKNOX2-214ENST00000561399 MRS2Q9HD23 443 aa21.12■□□□□ 0.97
PKNOX2-214ENST00000561399 MRC1P22897 1456 aa21.12■□□□□ 0.97
PKNOX2-214ENST00000561399 LY75O60449 1722 aa21.1■□□□□ 0.97
PKNOX2-214ENST00000561399 NUP188Q5SRE5 1749 aa21.1■□□□□ 0.97
PKNOX2-214ENST00000561399 RNMTO43148 476 aaKnown RBP21.1■□□□□ 0.97
PKNOX2-214ENST00000561399 HTATSF1O43719 755 aaKnown RBP21.1■□□□□ 0.97
PKNOX2-214ENST00000561399 PIGBQ92521 554 aa21.1■□□□□ 0.97
PKNOX2-214ENST00000561399 RTF1Q92541 710 aaKnown RBP21.1■□□□□ 0.97
PKNOX2-214ENST00000561399 SLC27A3Q5K4L6 730 aa21.09■□□□□ 0.97
PKNOX2-214ENST00000561399 PALLDQ8WX93 1383 aa21.09■□□□□ 0.97
PKNOX2-214ENST00000561399 NFE2L2Q16236 605 aa21.08■□□□□ 0.97
PKNOX2-214ENST00000561399 TXNRD1Q16881 649 aa21.08■□□□□ 0.97
PKNOX2-214ENST00000561399 RUNDC1Q96C34 613 aa21.08■□□□□ 0.97
PKNOX2-214ENST00000561399 ADAMTS8Q9UP79 889 aa21.08■□□□□ 0.97
PKNOX2-214ENST00000561399 SLC52A2Q9HAB3 445 aa21.07■□□□□ 0.96
PKNOX2-214ENST00000561399 TEFQ10587 303 aa21.06■□□□□ 0.96
PKNOX2-214ENST00000561399 NBPF14Q5TI25 921 aa21.06■□□□□ 0.96
PKNOX2-214ENST00000561399 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
PKNOX2-214ENST00000561399 CEMIPQ8WUJ3 1361 aa21.06■□□□□ 0.96
PKNOX2-214ENST00000561399 DLG5Q8TDM6 1919 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms