RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 LORP23490 312 aaPredicted RBP11.08□□□□□ -0.64
HMBOX1-216ENST00000561377 RNF144AP50876 292 aaPredicted RBP11.08□□□□□ -0.64
HMBOX1-216ENST00000561377 CYP2U1Q7Z449 544 aa11.08□□□□□ -0.64
HMBOX1-216ENST00000561377 ITGA6P23229 1130 aa11.07□□□□□ -0.64
HMBOX1-216ENST00000561377 GPC1P35052 558 aa11.07□□□□□ -0.64
HMBOX1-216ENST00000561377 EIF4G2P78344 907 aaKnown RBP eCLIP11.07□□□□□ -0.64
HMBOX1-216ENST00000561377 MEN1O00255 615 aa11.06□□□□□ -0.64
HMBOX1-216ENST00000561377 CEP126Q9P2H0 1117 aa11.06□□□□□ -0.64
HMBOX1-216ENST00000561377 SENP3-EIF4A1A0A087X0R7 540 aa11.04□□□□□ -0.64
HMBOX1-216ENST00000561377 A0A1W2PRU2 124 aa11.04□□□□□ -0.64
HMBOX1-216ENST00000561377 CDC14CA4D256 554 aa11.04□□□□□ -0.64
HMBOX1-216ENST00000561377 SCTRP47872 440 aa11.04□□□□□ -0.64
HMBOX1-216ENST00000561377 PRICKLE2Q7Z3G6 844 aa11.04□□□□□ -0.64
HMBOX1-216ENST00000561377 GPR161Q8N6U8 529 aaKnown RBP11.04□□□□□ -0.64
HMBOX1-216ENST00000561377 NLRP3Q96P20 1036 aa11.04□□□□□ -0.64
HMBOX1-216ENST00000561377 IRF5Q13568 498 aa11.03□□□□□ -0.64
HMBOX1-216ENST00000561377 SV2AQ7L0J3 742 aa11.03□□□□□ -0.64
HMBOX1-216ENST00000561377 OSBPL3Q9H4L5 887 aa11.03□□□□□ -0.64
HMBOX1-216ENST00000561377 TRAK2O60296 914 aa11.02□□□□□ -0.65
HMBOX1-216ENST00000561377 MYCP01106 439 aaPredicted RBP11.02□□□□□ -0.65
HMBOX1-216ENST00000561377 VWA5B2Q8N398 1253 aa11.02□□□□□ -0.65
HMBOX1-216ENST00000561377 CLN3Q13286 438 aa11.01□□□□□ -0.65
HMBOX1-216ENST00000561377 SLC27A3Q5K4L6 730 aa11.01□□□□□ -0.65
HMBOX1-216ENST00000561377 CNTNAP3BQ96NU0 1288 aa11.01□□□□□ -0.65
HMBOX1-216ENST00000561377 CNTNAP3Q9BZ76 1288 aa11.01□□□□□ -0.65
HMBOX1-216ENST00000561377 GDPD2Q9HCC8 539 aa11.01□□□□□ -0.65
HMBOX1-216ENST00000561377 RHOQP17081 205 aa11□□□□□ -0.65
HMBOX1-216ENST00000561377 ABL2P42684 1182 aa11□□□□□ -0.65
HMBOX1-216ENST00000561377 WASHC4Q2M389 1173 aa11□□□□□ -0.65
HMBOX1-216ENST00000561377 CCDC85AQ96PX6 553 aaPredicted RBP11□□□□□ -0.65
HMBOX1-216ENST00000561377 COL25A1Q9BXS0 654 aaPredicted RBP11□□□□□ -0.65
HMBOX1-216ENST00000561377 GNRH1P01148 92 aa10.99□□□□□ -0.65
HMBOX1-216ENST00000561377 VAC14Q08AM6 782 aa10.99□□□□□ -0.65
HMBOX1-216ENST00000561377 MCM6Q14566 821 aa10.99□□□□□ -0.65
HMBOX1-216ENST00000561377 SLFNL1Q499Z3 407 aa10.99□□□□□ -0.65
HMBOX1-216ENST00000561377 ARHGEF10LQ9HCE6 1279 aa10.99□□□□□ -0.65
HMBOX1-216ENST00000561377 KRT76Q01546 638 aa10.98□□□□□ -0.65
HMBOX1-216ENST00000561377 RNF135Q8IUD6 432 aa10.97□□□□□ -0.65
HMBOX1-216ENST00000561377 CDCA7Q9BWT1 371 aaPredicted RBP10.97□□□□□ -0.65
HMBOX1-216ENST00000561377 DOLKQ9UPQ8 538 aa10.97□□□□□ -0.65
HMBOX1-216ENST00000561377 GRIP2Q9C0E4 1043 aa10.96□□□□□ -0.65
HMBOX1-216ENST00000561377 POU4F2Q12837 409 aa10.95□□□□□ -0.66
HMBOX1-216ENST00000561377 USP4Q13107 963 aa10.95□□□□□ -0.66
HMBOX1-216ENST00000561377 PHTF2Q8N3S3 785 aa10.95□□□□□ -0.66
HMBOX1-216ENST00000561377 GMCL1Q96IK5 515 aa10.95□□□□□ -0.66
HMBOX1-216ENST00000561377 ESYT1Q9BSJ8 1104 aa10.95□□□□□ -0.66
HMBOX1-216ENST00000561377 SPATA31C2B4DYI2 1134 aa10.94□□□□□ -0.66
HMBOX1-216ENST00000561377 SOX11P35716 441 aa10.94□□□□□ -0.66
HMBOX1-216ENST00000561377 WDR44Q5JSH3 913 aa10.94□□□□□ -0.66
HMBOX1-216ENST00000561377 SIRT1Q96EB6 747 aa10.94□□□□□ -0.66
HMBOX1-216ENST00000561377 RAB6BQ9NRW1 208 aa10.94□□□□□ -0.66
HMBOX1-216ENST00000561377 DYRK1BQ9Y463 629 aa10.94□□□□□ -0.66
HMBOX1-216ENST00000561377 SEMA3FQ13275 785 aa10.93□□□□□ -0.66
HMBOX1-216ENST00000561377 RNFT1Q5M7Z0 435 aa10.93□□□□□ -0.66
HMBOX1-216ENST00000561377 CNKSR1Q969H4 720 aa10.93□□□□□ -0.66
HMBOX1-216ENST00000561377 IL2RAP01589 272 aa10.92□□□□□ -0.66
HMBOX1-216ENST00000561377 ESCO1Q5FWF5 840 aa10.92□□□□□ -0.66
HMBOX1-216ENST00000561377 NBPF10Q6P3W6 841 aaKnown RBP10.92□□□□□ -0.66
HMBOX1-216ENST00000561377 TAS1R3Q7RTX0 852 aa10.92□□□□□ -0.66
HMBOX1-216ENST00000561377 TRIM22Q8IYM9 498 aa10.92□□□□□ -0.66
HMBOX1-216ENST00000561377 NBPF15Q8N660 670 aa10.92□□□□□ -0.66
HMBOX1-216ENST00000561377 CUEDC1Q9NWM3 386 aaPredicted RBP10.92□□□□□ -0.66
HMBOX1-216ENST00000561377 H7C1W4 665 aa10.91□□□□□ -0.66
HMBOX1-216ENST00000561377 RIPOR1Q6ZS17 1223 aa10.91□□□□□ -0.66
HMBOX1-216ENST00000561377 XAGE2Q96GT9 111 aa10.91□□□□□ -0.66
HMBOX1-216ENST00000561377 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
HMBOX1-216ENST00000561377 WASLO00401 505 aaPredicted RBP10.9□□□□□ -0.66
HMBOX1-216ENST00000561377 GTF2E1P29083 439 aaPredicted RBP10.9□□□□□ -0.66
HMBOX1-216ENST00000561377 CENPCQ03188 943 aa10.9□□□□□ -0.66
HMBOX1-216ENST00000561377 TSGA10IPQ3SY00 556 aa10.9□□□□□ -0.66
HMBOX1-216ENST00000561377 OXLD1Q5BKU9 147 aa10.9□□□□□ -0.66
HMBOX1-216ENST00000561377 WWC1Q8IX03 1113 aa10.9□□□□□ -0.66
HMBOX1-216ENST00000561377 ZNF837Q96EG3 531 aaPredicted RBP10.9□□□□□ -0.66
HMBOX1-216ENST00000561377 ZSCAN10Q96SZ4 725 aaPredicted RBP10.9□□□□□ -0.66
HMBOX1-216ENST00000561377 GAS2L1Q99501 681 aaPredicted RBP10.9□□□□□ -0.66
HMBOX1-216ENST00000561377 COG6Q9Y2V7 657 aa10.9□□□□□ -0.66
HMBOX1-216ENST00000561377 MAP7D1Q3KQU3 841 aa10.89□□□□□ -0.67
HMBOX1-216ENST00000561377 FOXR1Q6PIV2 292 aa10.89□□□□□ -0.67
HMBOX1-216ENST00000561377 TIMMDC1Q9NPL8 285 aa10.89□□□□□ -0.67
HMBOX1-216ENST00000561377 SLURP2P0DP57 97 aa10.88□□□□□ -0.67
HMBOX1-216ENST00000561377 HRH3Q9Y5N1 445 aa10.88□□□□□ -0.67
HMBOX1-216ENST00000561377 DBN1Q16643 649 aa10.86□□□□□ -0.67
HMBOX1-216ENST00000561377 GNASQ5JWF2 1037 aa10.86□□□□□ -0.67
HMBOX1-216ENST00000561377 ZNF385CQ66K41 422 aaPredicted RBP10.86□□□□□ -0.67
HMBOX1-216ENST00000561377 SVOPQ8N4V2 548 aa10.86□□□□□ -0.67
HMBOX1-216ENST00000561377 PLPP7Q8NBV4 271 aa10.86□□□□□ -0.67
HMBOX1-216ENST00000561377 RAD21O60216 631 aa10.85□□□□□ -0.67
HMBOX1-216ENST00000561377 F11P03951 625 aa10.85□□□□□ -0.67
HMBOX1-216ENST00000561377 SRSF11Q05519 484 aaKnown RBP10.85□□□□□ -0.67
HMBOX1-216ENST00000561377 FLIIQ13045 1269 aa10.85□□□□□ -0.67
HMBOX1-216ENST00000561377 TMEM214Q6NUQ4 689 aaKnown RBP10.85□□□□□ -0.67
HMBOX1-216ENST00000561377 FHDC1Q9C0D6 1143 aaPredicted RBP10.85□□□□□ -0.67
HMBOX1-216ENST00000561377 ADAMTS2O95450 1211 aa10.84□□□□□ -0.67
HMBOX1-216ENST00000561377 GAS6Q14393 721 aa10.84□□□□□ -0.67
HMBOX1-216ENST00000561377 TRERF1Q96PN7 1200 aa10.84□□□□□ -0.67
HMBOX1-216ENST00000561377 ETNK1Q9HBU6 452 aa10.84□□□□□ -0.67
HMBOX1-216ENST00000561377 GTPBP3Q969Y2 492 aaKnown RBP10.83□□□□□ -0.68
HMBOX1-216ENST00000561377 A0A1B0GTH6 734 aa10.82□□□□□ -0.68
HMBOX1-216ENST00000561377 GPR25O00155 361 aa10.82□□□□□ -0.68
HMBOX1-216ENST00000561377 PHKA2P46019 1235 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms