RNA–Protein interactions for RNA: ENST00000561366.1

IDH3A-223, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 3 BASIC

Gene IDH3A, Length 389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-223ENST00000561366 ACSBG1Q96GR2 724 aa9.42□□□□□ -0.9
IDH3A-223ENST00000561366 MEGF6O75095 1541 aa9.41□□□□□ -0.9
IDH3A-223ENST00000561366 WDR43Q15061 677 aaKnown RBP eCLIP9.41□□□□□ -0.9
IDH3A-223ENST00000561366 PLEKHO1Q53GL0 409 aaPredicted RBP9.41□□□□□ -0.9
IDH3A-223ENST00000561366 CDCA7Q9BWT1 371 aaPredicted RBP9.41□□□□□ -0.9
IDH3A-223ENST00000561366 ABCC6O95255 1503 aa9.41□□□□□ -0.9
IDH3A-223ENST00000561366 COL3A1P02461 1466 aaPredicted RBP9.4□□□□□ -0.9
IDH3A-223ENST00000561366 ZNF530Q6P9A1 599 aaPredicted RBP9.4□□□□□ -0.9
IDH3A-223ENST00000561366 FAM9BQ8IZU0 186 aa9.4□□□□□ -0.9
IDH3A-223ENST00000561366 PHACTR3Q96KR7 559 aa9.4□□□□□ -0.9
IDH3A-223ENST00000561366 ADAMTS8Q9UP79 889 aa9.4□□□□□ -0.9
IDH3A-223ENST00000561366 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
IDH3A-223ENST00000561366 DISP2A7MBM2 1401 aa9.39□□□□□ -0.91
IDH3A-223ENST00000561366 CYP27B1O15528 508 aa9.39□□□□□ -0.91
IDH3A-223ENST00000561366 TRIM37O94972 964 aa9.39□□□□□ -0.91
IDH3A-223ENST00000561366 MTHFSDQ2M296 383 aaKnown RBP9.39□□□□□ -0.91
IDH3A-223ENST00000561366 PTF1AQ7RTS3 328 aa9.39□□□□□ -0.91
IDH3A-223ENST00000561366 SYTL4Q96C24 671 aaPredicted RBP9.39□□□□□ -0.91
IDH3A-223ENST00000561366 RSPH6AQ9H0K4 717 aa9.39□□□□□ -0.91
IDH3A-223ENST00000561366 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.39□□□□□ -0.91
IDH3A-223ENST00000561366 RGPD2P0DJD1 1756 aa9.38□□□□□ -0.91
IDH3A-223ENST00000561366 KCNQ2O43526 872 aa9.38□□□□□ -0.91
IDH3A-223ENST00000561366 MPRIPQ6WCQ1 1025 aa9.38□□□□□ -0.91
IDH3A-223ENST00000561366 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
IDH3A-223ENST00000561366 FCHSD2O94868 740 aa9.37□□□□□ -0.91
IDH3A-223ENST00000561366 PHKG2P15735 406 aa9.37□□□□□ -0.91
IDH3A-223ENST00000561366 PRIM1P49642 420 aaKnown RBP9.37□□□□□ -0.91
IDH3A-223ENST00000561366 NEUROD2Q15784 382 aa9.37□□□□□ -0.91
IDH3A-223ENST00000561366 C1orf141Q5JVX7 400 aa9.37□□□□□ -0.91
IDH3A-223ENST00000561366 FAM196AQ6ZSG2 479 aa9.37□□□□□ -0.91
IDH3A-223ENST00000561366 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
IDH3A-223ENST00000561366 OVOS2A0A0G2JMS6 1433 aa9.37□□□□□ -0.91
IDH3A-223ENST00000561366 NEFMP07197 916 aa9.36□□□□□ -0.91
IDH3A-223ENST00000561366 DCTN1Q14203 1278 aa9.36□□□□□ -0.91
IDH3A-223ENST00000561366 AMOTQ4VCS5 1084 aa9.36□□□□□ -0.91
IDH3A-223ENST00000561366 IFNL2Q8IZJ0 200 aa9.36□□□□□ -0.91
IDH3A-223ENST00000561366 PNISRQ8TF01 805 aaKnown RBP9.36□□□□□ -0.91
IDH3A-223ENST00000561366 FAM208AQ9UK61 1670 aaKnown RBP9.36□□□□□ -0.91
IDH3A-223ENST00000561366 PCDH11XQ9BZA7 1347 aa9.35□□□□□ -0.91
IDH3A-223ENST00000561366 PCDH11YQ9BZA8 1340 aa9.35□□□□□ -0.91
IDH3A-223ENST00000561366 MAPK8IP3Q9UPT6 1336 aa9.35□□□□□ -0.91
IDH3A-223ENST00000561366 APBA3O96018 575 aa9.35□□□□□ -0.91
IDH3A-223ENST00000561366 TNS2Q63HR2 1409 aa9.35□□□□□ -0.91
IDH3A-223ENST00000561366 UPF1Q92900 1129 aaKnown RBP eCLIP9.35□□□□□ -0.91
IDH3A-223ENST00000561366 PLEKHF1Q96S99 279 aa9.35□□□□□ -0.91
IDH3A-223ENST00000561366 LGR6Q9HBX8 967 aa9.35□□□□□ -0.91
IDH3A-223ENST00000561366 KDRP35968 1356 aa9.35□□□□□ -0.91
IDH3A-223ENST00000561366 NCAPD2Q15021 1401 aa9.34□□□□□ -0.91
IDH3A-223ENST00000561366 SF3B2Q13435 895 aaKnown RBP9.34□□□□□ -0.91
IDH3A-223ENST00000561366 MCM10Q7L590 875 aa9.34□□□□□ -0.91
IDH3A-223ENST00000561366 DEFB132Q7Z7B7 95 aa9.34□□□□□ -0.91
IDH3A-223ENST00000561366 GAS2L2Q8NHY3 880 aa9.34□□□□□ -0.91
IDH3A-223ENST00000561366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.34□□□□□ -0.91
IDH3A-223ENST00000561366 THSD7AQ9UPZ6 1657 aa9.34□□□□□ -0.91
IDH3A-223ENST00000561366 APAF1O14727 1248 aa9.33□□□□□ -0.92
IDH3A-223ENST00000561366 RIPK4P57078 832 aa9.33□□□□□ -0.92
IDH3A-223ENST00000561366 CABP4P57796 275 aa9.33□□□□□ -0.92
IDH3A-223ENST00000561366 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
IDH3A-223ENST00000561366 AKAP4Q5JQC9 854 aa9.33□□□□□ -0.92
IDH3A-223ENST00000561366 RUNDC1Q96C34 613 aa9.33□□□□□ -0.92
IDH3A-223ENST00000561366 THUMPD2Q9BTF0 503 aaKnown RBP9.33□□□□□ -0.92
IDH3A-223ENST00000561366 PNNQ9H307 717 aaKnown RBP9.33□□□□□ -0.92
IDH3A-223ENST00000561366 LRRC37A3O60309 1634 aa9.33□□□□□ -0.92
IDH3A-223ENST00000561366 GNAT3A8MTJ3 354 aa9.32□□□□□ -0.92
IDH3A-223ENST00000561366 CCER2I3L3R5 266 aa9.32□□□□□ -0.92
IDH3A-223ENST00000561366 RNMTO43148 476 aaKnown RBP9.32□□□□□ -0.92
IDH3A-223ENST00000561366 NFE2L2Q16236 605 aa9.32□□□□□ -0.92
IDH3A-223ENST00000561366 NFATC2IPQ8NCF5 419 aa9.32□□□□□ -0.92
IDH3A-223ENST00000561366 IL17REQ8NFR9 667 aa9.32□□□□□ -0.92
IDH3A-223ENST00000561366 RTF1Q92541 710 aaKnown RBP9.32□□□□□ -0.92
IDH3A-223ENST00000561366 BRWD3Q6RI45 1802 aa9.31□□□□□ -0.92
IDH3A-223ENST00000561366 SOCS7O14512 581 aa9.31□□□□□ -0.92
IDH3A-223ENST00000561366 HSP90AB1P08238 724 aaKnown RBP9.31□□□□□ -0.92
IDH3A-223ENST00000561366 TMPOP42166 694 aaKnown RBP9.31□□□□□ -0.92
IDH3A-223ENST00000561366 KCNQ4P56696 695 aa9.31□□□□□ -0.92
IDH3A-223ENST00000561366 NKX1-1Q15270 411 aaPredicted RBP9.31□□□□□ -0.92
IDH3A-223ENST00000561366 EZH2Q15910 746 aaKnown RBP9.31□□□□□ -0.92
IDH3A-223ENST00000561366 PIGBQ92521 554 aa9.31□□□□□ -0.92
IDH3A-223ENST00000561366 DCAF5Q96JK2 942 aa9.31□□□□□ -0.92
IDH3A-223ENST00000561366 BCL11BQ9C0K0 894 aaPredicted RBP9.31□□□□□ -0.92
IDH3A-223ENST00000561366 TMOD3Q9NYL9 352 aa9.31□□□□□ -0.92
IDH3A-223ENST00000561366 MIS18AQ9NYP9 233 aa9.31□□□□□ -0.92
IDH3A-223ENST00000561366 RGPD1P0DJD0 1748 aa9.31□□□□□ -0.92
IDH3A-223ENST00000561366 SLC39A6Q13433 755 aa9.3□□□□□ -0.92
IDH3A-223ENST00000561366 LAS1LQ9Y4W2 734 aaKnown RBP9.3□□□□□ -0.92
IDH3A-223ENST00000561366 PARP4Q9UKK3 1724 aaKnown RBP9.3□□□□□ -0.92
IDH3A-223ENST00000561366 MAP3K5Q99683 1374 aa9.29□□□□□ -0.92
IDH3A-223ENST00000561366 TEFQ10587 303 aa9.29□□□□□ -0.92
IDH3A-223ENST00000561366 RBM42Q9BTD8 480 aaKnown RBP9.29□□□□□ -0.92
IDH3A-223ENST00000561366 ASAP1Q9ULH1 1129 aa9.29□□□□□ -0.92
IDH3A-223ENST00000561366 KDM6AO15550 1401 aaPredicted RBP9.29□□□□□ -0.92
IDH3A-223ENST00000561366 ERVV-2B6SEH9 535 aa9.28□□□□□ -0.92
IDH3A-223ENST00000561366 KCNQ3O43525 872 aa9.28□□□□□ -0.92
IDH3A-223ENST00000561366 PTCD1O75127 700 aaKnown RBP9.28□□□□□ -0.92
IDH3A-223ENST00000561366 BAG6P46379 1132 aa9.28□□□□□ -0.92
IDH3A-223ENST00000561366 SLC52A2Q9HAB3 445 aa9.28□□□□□ -0.92
IDH3A-223ENST00000561366 ATG3Q9NT62 314 aa9.28□□□□□ -0.92
IDH3A-223ENST00000561366 WNK3Q9BYP7 1800 aa9.27□□□□□ -0.93
IDH3A-223ENST00000561366 TRIM35Q9UPQ4 493 aa9.27□□□□□ -0.93
IDH3A-223ENST00000561366 BTBD11A6QL63 1104 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms