RNA–Protein interactions for RNA: ENST00000561332.1

CCDC33-210, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 820 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-210ENST00000561332 NPC1L1Q9UHC9 1359 aa18.46■□□□□ 0.55
CCDC33-210ENST00000561332 EZH2Q15910 746 aaKnown RBP18.46■□□□□ 0.55
CCDC33-210ENST00000561332 EYA1Q99502 592 aa18.46■□□□□ 0.55
CCDC33-210ENST00000561332 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.55
CCDC33-210ENST00000561332 ACSBG1Q96GR2 724 aa18.45■□□□□ 0.54
CCDC33-210ENST00000561332 NCAPD2Q15021 1401 aa18.44■□□□□ 0.54
CCDC33-210ENST00000561332 PTF1AQ7RTS3 328 aa18.44■□□□□ 0.54
CCDC33-210ENST00000561332 CAMKK2Q96RR4 588 aa18.44■□□□□ 0.54
CCDC33-210ENST00000561332 PARD3Q8TEW0 1356 aa18.43■□□□□ 0.54
CCDC33-210ENST00000561332 SHANK3Q9BYB0 1731 aa18.43■□□□□ 0.54
CCDC33-210ENST00000561332 NHSQ6T4R5 1651 aa18.43■□□□□ 0.54
CCDC33-210ENST00000561332 KCNQ2O43526 872 aa18.42■□□□□ 0.54
CCDC33-210ENST00000561332 KAT6BQ8WYB5 2073 aa18.42■□□□□ 0.54
CCDC33-210ENST00000561332 MTHFSP49914 203 aa18.41■□□□□ 0.54
CCDC33-210ENST00000561332 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
CCDC33-210ENST00000561332 IGSF1Q8N6C5 1336 aa18.41■□□□□ 0.54
CCDC33-210ENST00000561332 PCDH11XQ9BZA7 1347 aa18.41■□□□□ 0.54
CCDC33-210ENST00000561332 PCDH11YQ9BZA8 1340 aa18.41■□□□□ 0.54
CCDC33-210ENST00000561332 RREB1Q92766 1687 aa18.39■□□□□ 0.53
CCDC33-210ENST00000561332 PKD1L3Q7Z443 1732 aa18.39■□□□□ 0.53
CCDC33-210ENST00000561332 DOT1LQ8TEK3 1739 aa18.39■□□□□ 0.53
CCDC33-210ENST00000561332 RGPD3A6NKT7 1758 aaPredicted RBP18.38■□□□□ 0.53
CCDC33-210ENST00000561332 RGPD4Q7Z3J3 1758 aa18.38■□□□□ 0.53
CCDC33-210ENST00000561332 PLSCR1O15162 318 aa18.38■□□□□ 0.53
CCDC33-210ENST00000561332 SYTL4Q96C24 671 aaPredicted RBP18.38■□□□□ 0.53
CCDC33-210ENST00000561332 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
CCDC33-210ENST00000561332 ANP32CO43423 234 aa18.37■□□□□ 0.53
CCDC33-210ENST00000561332 NUP188Q5SRE5 1749 aa18.37■□□□□ 0.53
CCDC33-210ENST00000561332 BTAF1O14981 1849 aa18.36■□□□□ 0.53
CCDC33-210ENST00000561332 IL13P35225 146 aa18.36■□□□□ 0.53
CCDC33-210ENST00000561332 PSDA5PKW4 1024 aaPredicted RBP18.35■□□□□ 0.53
CCDC33-210ENST00000561332 CYP27B1O15528 508 aa18.35■□□□□ 0.53
CCDC33-210ENST00000561332 PRIM1P49642 420 aaKnown RBP18.35■□□□□ 0.53
CCDC33-210ENST00000561332 SULT6B1Q6IMI4 303 aa18.34■□□□□ 0.53
CCDC33-210ENST00000561332 AEBP1Q8IUX7 1158 aa18.34■□□□□ 0.53
CCDC33-210ENST00000561332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCDC33-210ENST00000561332 DIAPH1O60610 1272 aaKnown RBP18.33■□□□□ 0.52
CCDC33-210ENST00000561332 NBPF14Q5TI25 921 aa18.33■□□□□ 0.52
CCDC33-210ENST00000561332 PLEKHG2Q9H7P9 1386 aa18.32■□□□□ 0.52
CCDC33-210ENST00000561332 R3HDM1Q15032 1099 aaKnown RBP18.32■□□□□ 0.52
CCDC33-210ENST00000561332 RALBP1Q15311 655 aa18.31■□□□□ 0.52
CCDC33-210ENST00000561332 TXNRD1Q16881 649 aa18.31■□□□□ 0.52
CCDC33-210ENST00000561332 PRKRIP1Q9H875 184 aaPredicted RBP18.31■□□□□ 0.52
CCDC33-210ENST00000561332 KDRP35968 1356 aa18.3■□□□□ 0.52
CCDC33-210ENST00000561332 PPP2R1AP30153 589 aa18.3■□□□□ 0.52
CCDC33-210ENST00000561332 PLEKHO1Q53GL0 409 aaPredicted RBP18.3■□□□□ 0.52
CCDC33-210ENST00000561332 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
CCDC33-210ENST00000561332 PROM2Q8N271 834 aa18.3■□□□□ 0.52
CCDC33-210ENST00000561332 CFAP53Q96M91 514 aa18.3■□□□□ 0.52
CCDC33-210ENST00000561332 COL3A1P02461 1466 aaPredicted RBP18.3■□□□□ 0.52
CCDC33-210ENST00000561332 HMOX1P09601 288 aa18.29■□□□□ 0.52
CCDC33-210ENST00000561332 PHKG2P15735 406 aa18.29■□□□□ 0.52
CCDC33-210ENST00000561332 TOGARAM1Q9Y4F4 1720 aa18.29■□□□□ 0.52
CCDC33-210ENST00000561332 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
CCDC33-210ENST00000561332 NKX1-1Q15270 411 aaPredicted RBP18.28■□□□□ 0.52
CCDC33-210ENST00000561332 AMOTQ4VCS5 1084 aa18.28■□□□□ 0.52
CCDC33-210ENST00000561332 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
CCDC33-210ENST00000561332 MIER1Q8N108 512 aa18.28■□□□□ 0.52
CCDC33-210ENST00000561332 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.52
CCDC33-210ENST00000561332 C1orf141Q5JVX7 400 aa18.26■□□□□ 0.51
CCDC33-210ENST00000561332 ANO8Q9HCE9 1232 aaPredicted RBP18.26■□□□□ 0.51
CCDC33-210ENST00000561332 HSP90AB1P08238 724 aaKnown RBP18.25■□□□□ 0.51
CCDC33-210ENST00000561332 ITGB4P16144 1822 aa18.25■□□□□ 0.51
CCDC33-210ENST00000561332 STK32BQ9NY57 414 aa18.24■□□□□ 0.51
CCDC33-210ENST00000561332 SLC27A3Q5K4L6 730 aa18.23■□□□□ 0.51
CCDC33-210ENST00000561332 TMOD3Q9NYL9 352 aa18.23■□□□□ 0.51
CCDC33-210ENST00000561332 NUDCQ9Y266 331 aa18.23■□□□□ 0.51
CCDC33-210ENST00000561332 PIGBQ92521 554 aa18.22■□□□□ 0.51
CCDC33-210ENST00000561332 DCAF5Q96JK2 942 aa18.22■□□□□ 0.51
CCDC33-210ENST00000561332 LRRC4BQ9NT99 713 aa18.22■□□□□ 0.51
CCDC33-210ENST00000561332 LY75O60449 1722 aa18.22■□□□□ 0.51
CCDC33-210ENST00000561332 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
CCDC33-210ENST00000561332 PAPPAQ13219 1627 aa18.21■□□□□ 0.51
CCDC33-210ENST00000561332 KCNQ4P56696 695 aa18.21■□□□□ 0.51
CCDC33-210ENST00000561332 CCNL1Q9UK58 526 aaPredicted RBP18.21■□□□□ 0.51
CCDC33-210ENST00000561332 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
CCDC33-210ENST00000561332 SLC15A2Q16348 729 aa18.2■□□□□ 0.5
CCDC33-210ENST00000561332 SMARCC1Q92922 1105 aaPredicted RBP18.2■□□□□ 0.5
CCDC33-210ENST00000561332 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
CCDC33-210ENST00000561332 ERVV-2B6SEH9 535 aa18.18■□□□□ 0.5
CCDC33-210ENST00000561332 CCER2I3L3R5 266 aa18.18■□□□□ 0.5
CCDC33-210ENST00000561332 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
CCDC33-210ENST00000561332 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCDC33-210ENST00000561332 AKAP4Q5JQC9 854 aa18.18■□□□□ 0.5
CCDC33-210ENST00000561332 LRP5O75197 1615 aa18.17■□□□□ 0.5
CCDC33-210ENST00000561332 CABP4P57796 275 aa18.17■□□□□ 0.5
CCDC33-210ENST00000561332 ZNF827Q17R98 1081 aa18.17■□□□□ 0.5
CCDC33-210ENST00000561332 MTHFSDQ2M296 383 aaKnown RBP18.17■□□□□ 0.5
CCDC33-210ENST00000561332 PRKAR2BP31323 418 aa18.16■□□□□ 0.5
CCDC33-210ENST00000561332 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
CCDC33-210ENST00000561332 ASAP1Q9ULH1 1129 aa18.15■□□□□ 0.5
CCDC33-210ENST00000561332 SRCAPQ6ZRS2 3230 aa18.15■□□□□ 0.5
CCDC33-210ENST00000561332 GAS2L2Q8NHY3 880 aa18.14■□□□□ 0.49
CCDC33-210ENST00000561332 AKT1S1Q96B36 256 aa18.14■□□□□ 0.49
CCDC33-210ENST00000561332 C5P01031 1676 aa18.14■□□□□ 0.49
CCDC33-210ENST00000561332 CASZ1Q86V15 1759 aa18.14■□□□□ 0.49
CCDC33-210ENST00000561332 SCN11AQ9UI33 1791 aa18.14■□□□□ 0.49
CCDC33-210ENST00000561332 PDGFDQ9GZP0 370 aaPredicted RBP18.13■□□□□ 0.49
CCDC33-210ENST00000561332 ATG3Q9NT62 314 aa18.13■□□□□ 0.49
CCDC33-210ENST00000561332 LOC102724428A0A0B4J2F2 783 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms