RNA–Protein interactions for RNA: ENST00000561264.6

MEIS2-223, Transcript of Meis homeobox 2, human

TSL 2

Gene MEIS2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEIS2-223	ENST00000561264	SPG7	Q9UQ90	795 aa		11.99	□□□□□ -0.49
MEIS2-223	ENST00000561264	IGSF1	Q8N6C5	1336 aa		11.99	□□□□□ -0.49
MEIS2-223	ENST00000561264	PCDH11X	Q9BZA7	1347 aa		11.99	□□□□□ -0.49
MEIS2-223	ENST00000561264	PCDH11Y	Q9BZA8	1340 aa		11.99	□□□□□ -0.49
MEIS2-223	ENST00000561264	BCL9	O00512	1426 aa		11.99	□□□□□ -0.49
MEIS2-223	ENST00000561264	PPP2R1A	P30153	589 aa		11.98	□□□□□ -0.49
MEIS2-223	ENST00000561264	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
MEIS2-223	ENST00000561264	PKD1L3	Q7Z443	1732 aa		11.97	□□□□□ -0.49
MEIS2-223	ENST00000561264	MEGF6	O75095	1541 aa		11.97	□□□□□ -0.49
MEIS2-223	ENST00000561264	IL13	P35225	146 aa		11.97	□□□□□ -0.49
MEIS2-223	ENST00000561264	BAG6	P46379	1132 aa		11.97	□□□□□ -0.49
MEIS2-223	ENST00000561264	AMOT	Q4VCS5	1084 aa		11.97	□□□□□ -0.49
MEIS2-223	ENST00000561264	USHBP1	Q8N6Y0	703 aa		11.97	□□□□□ -0.49
MEIS2-223	ENST00000561264	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.96	□□□□□ -0.49
MEIS2-223	ENST00000561264	SBF2	Q86WG5	1849 aa		11.96	□□□□□ -0.49
MEIS2-223	ENST00000561264	NEFM	P07197	916 aa		11.95	□□□□□ -0.5
MEIS2-223	ENST00000561264	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.95	□□□□□ -0.5
MEIS2-223	ENST00000561264	SULT6B1	Q6IMI4	303 aa		11.95	□□□□□ -0.5
MEIS2-223	ENST00000561264	MARCH10	Q8NA82	808 aa	Predicted RBP	11.95	□□□□□ -0.5
MEIS2-223	ENST00000561264	DDX54	Q8TDD1	881 aa	Known RBP	11.95	□□□□□ -0.5
MEIS2-223	ENST00000561264	CNKSR2	Q8WXI2	1034 aa		11.95	□□□□□ -0.5
MEIS2-223	ENST00000561264	KAT6B	Q8WYB5	2073 aa		11.95	□□□□□ -0.5
MEIS2-223	ENST00000561264	KDR	P35968	1356 aa		11.94	□□□□□ -0.5
MEIS2-223	ENST00000561264	U2SURP	O15042	1029 aa	Known RBP	11.94	□□□□□ -0.5
MEIS2-223	ENST00000561264	HSP90AB1	P08238	724 aa	Known RBP	11.94	□□□□□ -0.5
MEIS2-223	ENST00000561264	HMGB2	P26583	209 aa	Known RBP	11.94	□□□□□ -0.5
MEIS2-223	ENST00000561264	PNN	Q9H307	717 aa	Known RBP	11.94	□□□□□ -0.5
MEIS2-223	ENST00000561264	COL3A1	P02461	1466 aa	Predicted RBP	11.94	□□□□□ -0.5
MEIS2-223	ENST00000561264	SHANK3	Q9BYB0	1731 aa		11.94	□□□□□ -0.5
MEIS2-223	ENST00000561264	TNS1	Q9HBL0	1735 aa	Known RBP	11.94	□□□□□ -0.5
MEIS2-223	ENST00000561264	NHS	Q6T4R5	1651 aa		11.94	□□□□□ -0.5
MEIS2-223	ENST00000561264	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.93	□□□□□ -0.5
MEIS2-223	ENST00000561264	RGPD4	Q7Z3J3	1758 aa		11.93	□□□□□ -0.5
MEIS2-223	ENST00000561264	ANP32C	O43423	234 aa		11.93	□□□□□ -0.5
MEIS2-223	ENST00000561264	TRIM37	O94972	964 aa		11.93	□□□□□ -0.5
MEIS2-223	ENST00000561264	FAM182B	Q5T319	152 aa		11.93	□□□□□ -0.5
MEIS2-223	ENST00000561264	IFNL2	Q8IZJ0	200 aa		11.93	□□□□□ -0.5
MEIS2-223	ENST00000561264	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.93	□□□□□ -0.5
MEIS2-223	ENST00000561264	EP400	Q96L91	3159 aa		11.93	□□□□□ -0.5
MEIS2-223	ENST00000561264	C1orf141	Q5JVX7	400 aa		11.92	□□□□□ -0.5
MEIS2-223	ENST00000561264	APBA3	O96018	575 aa		11.91	□□□□□ -0.5
MEIS2-223	ENST00000561264	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.91	□□□□□ -0.5
MEIS2-223	ENST00000561264	DOT1L	Q8TEK3	1739 aa		11.91	□□□□□ -0.5
MEIS2-223	ENST00000561264	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.9	□□□□□ -0.5
MEIS2-223	ENST00000561264	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
MEIS2-223	ENST00000561264	FCHSD2	O94868	740 aa		11.89	□□□□□ -0.51
MEIS2-223	ENST00000561264	HMOX1	P09601	288 aa		11.89	□□□□□ -0.51
MEIS2-223	ENST00000561264	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.89	□□□□□ -0.51
MEIS2-223	ENST00000561264	GAS2L2	Q8NHY3	880 aa		11.89	□□□□□ -0.51
MEIS2-223	ENST00000561264	SYTL4	Q96C24	671 aa	Predicted RBP	11.89	□□□□□ -0.51
MEIS2-223	ENST00000561264	PLSCR1	O15162	318 aa		11.88	□□□□□ -0.51
MEIS2-223	ENST00000561264	PHKG2	P15735	406 aa		11.88	□□□□□ -0.51
MEIS2-223	ENST00000561264	WDR43	Q15061	677 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
MEIS2-223	ENST00000561264	NKX1-1	Q15270	411 aa	Predicted RBP	11.88	□□□□□ -0.51
MEIS2-223	ENST00000561264	AEBP1	Q8IUX7	1158 aa		11.88	□□□□□ -0.51
MEIS2-223	ENST00000561264	BTAF1	O14981	1849 aa		11.88	□□□□□ -0.51
MEIS2-223	ENST00000561264	AKAP4	Q5JQC9	854 aa		11.87	□□□□□ -0.51
MEIS2-223	ENST00000561264	ACSBG1	Q96GR2	724 aa		11.87	□□□□□ -0.51
MEIS2-223	ENST00000561264	DCAF5	Q96JK2	942 aa		11.87	□□□□□ -0.51
MEIS2-223	ENST00000561264	MAPK8IP3	Q9UPT6	1336 aa		11.86	□□□□□ -0.51
MEIS2-223	ENST00000561264	CYP27B1	O15528	508 aa		11.86	□□□□□ -0.51
MEIS2-223	ENST00000561264	ITGB4	P16144	1822 aa		11.86	□□□□□ -0.51
MEIS2-223	ENST00000561264	RREB1	Q92766	1687 aa		11.85	□□□□□ -0.51
MEIS2-223	ENST00000561264	ERVV-2	B6SEH9	535 aa		11.85	□□□□□ -0.51
MEIS2-223	ENST00000561264	PRKAR2B	P31323	418 aa		11.85	□□□□□ -0.51
MEIS2-223	ENST00000561264	PRIM1	P49642	420 aa	Known RBP	11.85	□□□□□ -0.51
MEIS2-223	ENST00000561264	EN1	Q05925	392 aa	Predicted RBP	11.85	□□□□□ -0.51
MEIS2-223	ENST00000561264	NBPF14	Q5TI25	921 aa		11.85	□□□□□ -0.51
MEIS2-223	ENST00000561264	DEFB132	Q7Z7B7	95 aa		11.85	□□□□□ -0.51
MEIS2-223	ENST00000561264	SMARCC1	Q92922	1105 aa	Predicted RBP	11.85	□□□□□ -0.51
MEIS2-223	ENST00000561264	RSPH6A	Q9H0K4	717 aa		11.85	□□□□□ -0.51
MEIS2-223	ENST00000561264	TMOD3	Q9NYL9	352 aa		11.85	□□□□□ -0.51
MEIS2-223	ENST00000561264	SCN11A	Q9UI33	1791 aa		11.84	□□□□□ -0.51
MEIS2-223	ENST00000561264	VIRMA	Q69YN4	1812 aa	Known RBP	11.84	□□□□□ -0.51
MEIS2-223	ENST00000561264	KCNQ2	O43526	872 aa		11.83	□□□□□ -0.52
MEIS2-223	ENST00000561264	CABP4	P57796	275 aa		11.83	□□□□□ -0.52
MEIS2-223	ENST00000561264	SLC27A3	Q5K4L6	730 aa		11.83	□□□□□ -0.52
MEIS2-223	ENST00000561264	MPRIP	Q6WCQ1	1025 aa		11.83	□□□□□ -0.52
MEIS2-223	ENST00000561264	RTF1	Q92541	710 aa	Known RBP	11.83	□□□□□ -0.52
MEIS2-223	ENST00000561264	CAMKK2	Q96RR4	588 aa		11.83	□□□□□ -0.52
MEIS2-223	ENST00000561264	TOGARAM1	Q9Y4F4	1720 aa		11.83	□□□□□ -0.52
MEIS2-223	ENST00000561264	MAP3K5	Q99683	1374 aa		11.82	□□□□□ -0.52
MEIS2-223	ENST00000561264	GNAT3	A8MTJ3	354 aa		11.82	□□□□□ -0.52
MEIS2-223	ENST00000561264	EZH2	Q15910	746 aa	Known RBP	11.82	□□□□□ -0.52
MEIS2-223	ENST00000561264	MTHFSD	Q2M296	383 aa	Known RBP	11.82	□□□□□ -0.52
MEIS2-223	ENST00000561264	LY75	O60449	1722 aa		11.82	□□□□□ -0.52
MEIS2-223	ENST00000561264	NUP188	Q5SRE5	1749 aa		11.81	□□□□□ -0.52
MEIS2-223	ENST00000561264	HTATSF1	O43719	755 aa	Known RBP	11.81	□□□□□ -0.52
MEIS2-223	ENST00000561264	LMOD3	Q0VAK6	560 aa		11.81	□□□□□ -0.52
MEIS2-223	ENST00000561264	TEF	Q10587	303 aa		11.8	□□□□□ -0.52
MEIS2-223	ENST00000561264	TXNRD1	Q16881	649 aa		11.8	□□□□□ -0.52
MEIS2-223	ENST00000561264	PALLD	Q8WX93	1383 aa		11.79	□□□□□ -0.52
MEIS2-223	ENST00000561264	KDM6A	O15550	1401 aa	Predicted RBP	11.79	□□□□□ -0.52
MEIS2-223	ENST00000561264	ADAMTS7	Q9UKP4	1686 aa		11.79	□□□□□ -0.52
MEIS2-223	ENST00000561264	MRS2	Q9HD23	443 aa		11.79	□□□□□ -0.52
MEIS2-223	ENST00000561264	MRC1	P22897	1456 aa		11.78	□□□□□ -0.52
MEIS2-223	ENST00000561264	RNMT	O43148	476 aa	Known RBP	11.78	□□□□□ -0.52
MEIS2-223	ENST00000561264	PIGB	Q92521	554 aa		11.78	□□□□□ -0.52
MEIS2-223	ENST00000561264	SLC52A2	Q9HAB3	445 aa		11.78	□□□□□ -0.52
MEIS2-223	ENST00000561264	STK32B	Q9NY57	414 aa		11.78	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms