RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 APBA3O96018 575 aa14.17□□□□□ -0.14
TPM1-229ENST00000561242 MARF1Q9Y4F3 1742 aaKnown RBP14.17□□□□□ -0.14
TPM1-229ENST00000561242 PLCH1Q4KWH8 1693 aa14.17□□□□□ -0.14
TPM1-229ENST00000561242 IGSF1Q8N6C5 1336 aa14.16□□□□□ -0.14
TPM1-229ENST00000561242 ABCA3Q99758 1704 aa14.16□□□□□ -0.14
TPM1-229ENST00000561242 TRIM37O94972 964 aa14.16□□□□□ -0.14
TPM1-229ENST00000561242 FAM182BQ5T319 152 aa14.16□□□□□ -0.14
TPM1-229ENST00000561242 ACSBG1Q96GR2 724 aa14.15□□□□□ -0.14
TPM1-229ENST00000561242 PRKAR2BP31323 418 aa14.14□□□□□ -0.15
TPM1-229ENST00000561242 CABP4P57796 275 aa14.14□□□□□ -0.15
TPM1-229ENST00000561242 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.13□□□□□ -0.15
TPM1-229ENST00000561242 LMOD3Q0VAK6 560 aa14.13□□□□□ -0.15
TPM1-229ENST00000561242 AKAP4Q5JQC9 854 aa14.13□□□□□ -0.15
TPM1-229ENST00000561242 MARCH10Q8NA82 808 aaPredicted RBP14.13□□□□□ -0.15
TPM1-229ENST00000561242 BCL11BQ9C0K0 894 aaPredicted RBP14.13□□□□□ -0.15
TPM1-229ENST00000561242 TMOD3Q9NYL9 352 aa14.13□□□□□ -0.15
TPM1-229ENST00000561242 USP54Q70EL1 1684 aa14.13□□□□□ -0.15
TPM1-229ENST00000561242 LMO7Q8WWI1 1683 aa14.12□□□□□ -0.15
TPM1-229ENST00000561242 TEFQ10587 303 aa14.12□□□□□ -0.15
TPM1-229ENST00000561242 NBPF14Q5TI25 921 aa14.12□□□□□ -0.15
TPM1-229ENST00000561242 AEBP1Q8IUX7 1158 aa14.12□□□□□ -0.15
TPM1-229ENST00000561242 DCAF5Q96JK2 942 aa14.12□□□□□ -0.15
TPM1-229ENST00000561242 MPRIPQ6WCQ1 1025 aa14.11□□□□□ -0.15
TPM1-229ENST00000561242 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.15
TPM1-229ENST00000561242 SMARCC1Q92922 1105 aaPredicted RBP14.11□□□□□ -0.15
TPM1-229ENST00000561242 CRYBG1Q9Y4K1 1723 aa14.11□□□□□ -0.15
TPM1-229ENST00000561242 GNAT3A8MTJ3 354 aa14.1□□□□□ -0.15
TPM1-229ENST00000561242 PHKG2P15735 406 aa14.1□□□□□ -0.15
TPM1-229ENST00000561242 PRIM1P49642 420 aaKnown RBP14.1□□□□□ -0.15
TPM1-229ENST00000561242 PLEKHG2Q9H7P9 1386 aa14.09□□□□□ -0.15
TPM1-229ENST00000561242 GLI3P10071 1580 aa14.09□□□□□ -0.15
TPM1-229ENST00000561242 LTN1O94822 1766 aa14.09□□□□□ -0.15
TPM1-229ENST00000561242 TNS2Q63HR2 1409 aa14.09□□□□□ -0.15
TPM1-229ENST00000561242 RUNDC1Q96C34 613 aa14.09□□□□□ -0.15
TPM1-229ENST00000561242 ANKRD26Q9UPS8 1709 aa14.08□□□□□ -0.16
TPM1-229ENST00000561242 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
TPM1-229ENST00000561242 FAM9BQ8IZU0 186 aa14.08□□□□□ -0.16
TPM1-229ENST00000561242 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.16
TPM1-229ENST00000561242 CALD1Q05682 793 aaKnown RBP14.07□□□□□ -0.16
TPM1-229ENST00000561242 MTHFSDQ2M296 383 aaKnown RBP14.07□□□□□ -0.16
TPM1-229ENST00000561242 NPM2Q86SE8 214 aaKnown RBP14.07□□□□□ -0.16
TPM1-229ENST00000561242 RSPH6AQ9H0K4 717 aa14.07□□□□□ -0.16
TPM1-229ENST00000561242 NRAPQ86VF7 1730 aa14.07□□□□□ -0.16
TPM1-229ENST00000561242 HTATSF1O43719 755 aaKnown RBP14.06□□□□□ -0.16
TPM1-229ENST00000561242 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
TPM1-229ENST00000561242 COL18A1P39060 1754 aa14.06□□□□□ -0.16
TPM1-229ENST00000561242 DISP2A7MBM2 1401 aa14.06□□□□□ -0.16
TPM1-229ENST00000561242 CYP27B1O15528 508 aa14.05□□□□□ -0.16
TPM1-229ENST00000561242 RIPK4P57078 832 aa14.05□□□□□ -0.16
TPM1-229ENST00000561242 ADAMTS8Q9UP79 889 aa14.05□□□□□ -0.16
TPM1-229ENST00000561242 MAP2P11137 1827 aaKnown RBP14.05□□□□□ -0.16
TPM1-229ENST00000561242 FAM208AQ9UK61 1670 aaKnown RBP14.04□□□□□ -0.16
TPM1-229ENST00000561242 CCER2I3L3R5 266 aa14.04□□□□□ -0.16
TPM1-229ENST00000561242 EN1Q05925 392 aaPredicted RBP14.04□□□□□ -0.16
TPM1-229ENST00000561242 NKX1-1Q15270 411 aaPredicted RBP14.04□□□□□ -0.16
TPM1-229ENST00000561242 NFE2L2Q16236 605 aa14.04□□□□□ -0.16
TPM1-229ENST00000561242 CCDC146Q8IYE0 955 aa14.04□□□□□ -0.16
TPM1-229ENST00000561242 PNISRQ8TF01 805 aaKnown RBP14.04□□□□□ -0.16
TPM1-229ENST00000561242 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
TPM1-229ENST00000561242 KDRP35968 1356 aa14.04□□□□□ -0.16
TPM1-229ENST00000561242 MEGF6O75095 1541 aa14.04□□□□□ -0.16
TPM1-229ENST00000561242 PLSCR1O15162 318 aa14.03□□□□□ -0.16
TPM1-229ENST00000561242 KCNQ2O43526 872 aa14.03□□□□□ -0.16
TPM1-229ENST00000561242 MAP3K5Q99683 1374 aa14.02□□□□□ -0.17
TPM1-229ENST00000561242 RNMTO43148 476 aaKnown RBP14.02□□□□□ -0.17
TPM1-229ENST00000561242 SLC27A3Q5K4L6 730 aa14.02□□□□□ -0.17
TPM1-229ENST00000561242 DEFB132Q7Z7B7 95 aa14.02□□□□□ -0.17
TPM1-229ENST00000561242 NFATC2IPQ8NCF5 419 aa14.02□□□□□ -0.17
TPM1-229ENST00000561242 STK32BQ9NY57 414 aa14.02□□□□□ -0.17
TPM1-229ENST00000561242 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
TPM1-229ENST00000561242 PHACTR3Q96KR7 559 aa14.01□□□□□ -0.17
TPM1-229ENST00000561242 CCNL1Q9UK58 526 aaPredicted RBP14.01□□□□□ -0.17
TPM1-229ENST00000561242 LAS1LQ9Y4W2 734 aaKnown RBP14.01□□□□□ -0.17
TPM1-229ENST00000561242 PEAK1Q9H792 1746 aa14.01□□□□□ -0.17
TPM1-229ENST00000561242 MSH5O43196 834 aa14□□□□□ -0.17
TPM1-229ENST00000561242 EZH2Q15910 746 aaKnown RBP14□□□□□ -0.17
TPM1-229ENST00000561242 SLC52A2Q9HAB3 445 aa14□□□□□ -0.17
TPM1-229ENST00000561242 BCL9O00512 1426 aa13.99□□□□□ -0.17
TPM1-229ENST00000561242 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
TPM1-229ENST00000561242 PIGBQ92521 554 aa13.99□□□□□ -0.17
TPM1-229ENST00000561242 RGPD5Q99666 1765 aa13.99□□□□□ -0.17
TPM1-229ENST00000561242 ATP6V1AP38606 617 aa13.98□□□□□ -0.17
TPM1-229ENST00000561242 TAF7Q15545 349 aaPredicted RBP13.98□□□□□ -0.17
TPM1-229ENST00000561242 TXNRD1Q16881 649 aa13.98□□□□□ -0.17
TPM1-229ENST00000561242 MCM10Q7L590 875 aa13.98□□□□□ -0.17
TPM1-229ENST00000561242 NGEFQ8N5V2 710 aa13.98□□□□□ -0.17
TPM1-229ENST00000561242 CHMP4AQ9BY43 222 aa13.98□□□□□ -0.17
TPM1-229ENST00000561242 RRP7AQ9Y3A4 280 aaKnown RBP13.98□□□□□ -0.17
TPM1-229ENST00000561242 APAF1O14727 1248 aa13.97□□□□□ -0.17
TPM1-229ENST00000561242 PTCD1O75127 700 aaKnown RBP13.97□□□□□ -0.17
TPM1-229ENST00000561242 AK7Q96M32 723 aa13.97□□□□□ -0.17
TPM1-229ENST00000561242 TEX13AQ9BXU3 409 aaPredicted RBP13.97□□□□□ -0.17
TPM1-229ENST00000561242 LGR6Q9HBX8 967 aa13.97□□□□□ -0.17
TPM1-229ENST00000561242 THSD7AQ9UPZ6 1657 aa13.97□□□□□ -0.17
TPM1-229ENST00000561242 NCAPD2Q15021 1401 aa13.97□□□□□ -0.17
TPM1-229ENST00000561242 MIER1Q8N108 512 aa13.96□□□□□ -0.17
TPM1-229ENST00000561242 PLEKHF1Q96S99 279 aa13.96□□□□□ -0.17
TPM1-229ENST00000561242 TFCP2L1Q9NZI6 479 aa13.96□□□□□ -0.17
TPM1-229ENST00000561242 SALL2Q9Y467 1007 aaPredicted RBP13.96□□□□□ -0.17
TPM1-229ENST00000561242 PARP4Q9UKK3 1724 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms