RNA–Protein interactions for RNA: ENST00000561204.5

MEIS3-211, Transcript of Meis homeobox 3, humanhuman

TSL 1 (best)

Gene MEIS3, Length 2,195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-211ENST00000561204 RTN4Q9NQC3 1192 aaKnown RBP21.7■■□□□ 1.06
MEIS3-211ENST00000561204 SLIT1O75093 1534 aa21.7■■□□□ 1.06
MEIS3-211ENST00000561204 MCM4P33991 863 aa21.7■■□□□ 1.06
MEIS3-211ENST00000561204 RIMS1Q86UR5 1692 aaKnown RBP21.69■■□□□ 1.06
MEIS3-211ENST00000561204 DDIT3P35638 169 aa21.69■■□□□ 1.06
MEIS3-211ENST00000561204 ARHGAP23Q9P227 1491 aa21.69■■□□□ 1.06
MEIS3-211ENST00000561204 RGPD8O14715 1765 aaPredicted RBP21.69■■□□□ 1.06
MEIS3-211ENST00000561204 FOXO3O43524 673 aa21.68■■□□□ 1.06
MEIS3-211ENST00000561204 PLEKHM2Q8IWE5 1019 aa21.68■■□□□ 1.06
MEIS3-211ENST00000561204 ANKRD44Q8N8A2 993 aa21.68■■□□□ 1.06
MEIS3-211ENST00000561204 GSPT1P15170 499 aaKnown RBP21.68■■□□□ 1.06
MEIS3-211ENST00000561204 PTPRCP08575 1304 aa21.68■■□□□ 1.06
MEIS3-211ENST00000561204 SBNO1A3KN83 1393 aa21.67■■□□□ 1.06
MEIS3-211ENST00000561204 FLT4P35916 1363 aa21.67■■□□□ 1.06
MEIS3-211ENST00000561204 MSH6P52701 1360 aa21.67■■□□□ 1.06
MEIS3-211ENST00000561204 MTHFSDQ2M296 383 aaKnown RBP21.67■■□□□ 1.06
MEIS3-211ENST00000561204 TBX22Q9Y458 520 aa21.67■■□□□ 1.06
MEIS3-211ENST00000561204 DIP2AQ14689 1571 aa21.67■■□□□ 1.06
MEIS3-211ENST00000561204 MIS18AQ9NYP9 233 aa21.67■■□□□ 1.06
MEIS3-211ENST00000561204 KDRP35968 1356 aa21.66■■□□□ 1.06
MEIS3-211ENST00000561204 CDC45O75419 566 aa21.66■■□□□ 1.06
MEIS3-211ENST00000561204 CEP85Q6P2H3 762 aa21.65■■□□□ 1.06
MEIS3-211ENST00000561204 RPAP2Q8IXW5 612 aaPredicted RBP21.65■■□□□ 1.06
MEIS3-211ENST00000561204 RTL1A6NKG5 1358 aa21.65■■□□□ 1.06
MEIS3-211ENST00000561204 SLC4A2P04920 1241 aa21.64■■□□□ 1.06
MEIS3-211ENST00000561204 C16orf71Q8IYS4 520 aaPredicted RBP21.64■■□□□ 1.06
MEIS3-211ENST00000561204 NGDNQ8NEJ9 315 aaKnown RBP21.64■■□□□ 1.06
MEIS3-211ENST00000561204 PIK3C2AO00443 1686 aa21.64■■□□□ 1.05
MEIS3-211ENST00000561204 CEP170BQ9Y4F5 1589 aaPredicted RBP21.64■■□□□ 1.05
MEIS3-211ENST00000561204 MEIS3Q99687 375 aa21.64■■□□□ 1.05
MEIS3-211ENST00000561204 CD2BP2O95400 341 aaKnown RBP21.63■■□□□ 1.05
MEIS3-211ENST00000561204 IGSF1Q8N6C5 1336 aa21.63■■□□□ 1.05
MEIS3-211ENST00000561204 TTC22Q5TAA0 569 aa21.63■■□□□ 1.05
MEIS3-211ENST00000561204 EYA1Q99502 592 aa21.63■■□□□ 1.05
MEIS3-211ENST00000561204 RTF1Q92541 710 aaKnown RBP21.61■■□□□ 1.05
MEIS3-211ENST00000561204 TSPYL4Q9UJ04 414 aa21.61■■□□□ 1.05
MEIS3-211ENST00000561204 HSP90AB1P08238 724 aaKnown RBP21.61■■□□□ 1.05
MEIS3-211ENST00000561204 AMPHP49418 695 aa21.61■■□□□ 1.05
MEIS3-211ENST00000561204 G2E3Q7L622 706 aa21.61■■□□□ 1.05
MEIS3-211ENST00000561204 OTUD7AQ8TE49 926 aaPredicted RBP21.61■■□□□ 1.05
MEIS3-211ENST00000561204 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
MEIS3-211ENST00000561204 RBM42Q9BTD8 480 aaKnown RBP21.6■■□□□ 1.05
MEIS3-211ENST00000561204 XRN1Q8IZH2 1706 aaKnown RBP21.59■■□□□ 1.05
MEIS3-211ENST00000561204 SMARCA5O60264 1052 aaPredicted RBP21.58■■□□□ 1.04
MEIS3-211ENST00000561204 GAS2L2Q8NHY3 880 aa21.58■■□□□ 1.04
MEIS3-211ENST00000561204 CIZ1Q9ULV3 898 aaPredicted RBP21.58■■□□□ 1.04
MEIS3-211ENST00000561204 TRAK2O60296 914 aa21.57■■□□□ 1.04
MEIS3-211ENST00000561204 F6X3S4 739 aa21.57■■□□□ 1.04
MEIS3-211ENST00000561204 K7ELQ4 463 aaPredicted RBP21.57■■□□□ 1.04
MEIS3-211ENST00000561204 MARF1Q9Y4F3 1742 aaKnown RBP21.56■■□□□ 1.04
MEIS3-211ENST00000561204 NLRP6P59044 892 aa21.56■■□□□ 1.04
MEIS3-211ENST00000561204 THEMISQ8N1K5 641 aaPredicted RBP21.56■■□□□ 1.04
MEIS3-211ENST00000561204 LRRC37A3O60309 1634 aa21.56■■□□□ 1.04
MEIS3-211ENST00000561204 APBB1O00213 710 aa21.55■■□□□ 1.04
MEIS3-211ENST00000561204 L1TD1Q5T7N2 865 aaKnown RBP21.55■■□□□ 1.04
MEIS3-211ENST00000561204 TNPO1Q92973 898 aaKnown RBP21.55■■□□□ 1.04
MEIS3-211ENST00000561204 DDX11L8A8MPP1 907 aa21.55■■□□□ 1.04
MEIS3-211ENST00000561204 SLC4A10Q6U841 1118 aa21.55■■□□□ 1.04
MEIS3-211ENST00000561204 FER1L4A9Z1Z3 1794 aa21.55■■□□□ 1.04
MEIS3-211ENST00000561204 GZF1Q9H116 711 aaPredicted RBP21.54■■□□□ 1.04
MEIS3-211ENST00000561204 ANKARQ7Z5J8 1434 aa21.54■■□□□ 1.04
MEIS3-211ENST00000561204 NWD1Q149M9 1564 aa21.54■■□□□ 1.04
MEIS3-211ENST00000561204 SDSP20132 328 aa21.54■■□□□ 1.04
MEIS3-211ENST00000561204 HOXC9P31274 260 aa21.54■■□□□ 1.04
MEIS3-211ENST00000561204 CCT4P50991 539 aaKnown RBP21.54■■□□□ 1.04
MEIS3-211ENST00000561204 RAB3GAP1Q15042 981 aa21.54■■□□□ 1.04
MEIS3-211ENST00000561204 FSD2A1L4K1 749 aa21.53■■□□□ 1.04
MEIS3-211ENST00000561204 HTATSF1O43719 755 aaKnown RBP21.53■■□□□ 1.04
MEIS3-211ENST00000561204 EIF5BO60841 1220 aaKnown RBP21.53■■□□□ 1.04
MEIS3-211ENST00000561204 KCNA6P17658 529 aa21.53■■□□□ 1.04
MEIS3-211ENST00000561204 NUTM2GQ5VZR2 741 aa21.53■■□□□ 1.04
MEIS3-211ENST00000561204 USP26Q9BXU7 913 aa21.53■■□□□ 1.04
MEIS3-211ENST00000561204 FOXD4L1Q9NU39 408 aa21.52■■□□□ 1.04
MEIS3-211ENST00000561204 GNAT3A8MTJ3 354 aa21.51■■□□□ 1.03
MEIS3-211ENST00000561204 HMMRO75330 724 aa21.51■■□□□ 1.03
MEIS3-211ENST00000561204 HSP90AA1P07900 732 aaKnown RBP21.51■■□□□ 1.03
MEIS3-211ENST00000561204 USP54Q70EL1 1684 aa21.51■■□□□ 1.03
MEIS3-211ENST00000561204 FAM208AQ9UK61 1670 aaKnown RBP21.5■■□□□ 1.03
MEIS3-211ENST00000561204 STK31Q9BXU1 1019 aa21.5■■□□□ 1.03
MEIS3-211ENST00000561204 GOLGA6L3A6NEY3 463 aa21.5■■□□□ 1.03
MEIS3-211ENST00000561204 RABEP1Q15276 862 aa21.49■■□□□ 1.03
MEIS3-211ENST00000561204 IL17REQ8NFR9 667 aa21.48■■□□□ 1.03
MEIS3-211ENST00000561204 XRCC6P12956 609 aaKnown RBP eCLIP21.48■■□□□ 1.03
MEIS3-211ENST00000561204 FLIIQ13045 1269 aa21.48■■□□□ 1.03
MEIS3-211ENST00000561204 GNAI2P04899 355 aa21.47■■□□□ 1.03
MEIS3-211ENST00000561204 CCDC30Q5VVM6 783 aa21.47■■□□□ 1.03
MEIS3-211ENST00000561204 ABTB2Q8N961 1025 aa21.47■■□□□ 1.03
MEIS3-211ENST00000561204 GBP4Q96PP9 640 aa21.47■■□□□ 1.03
MEIS3-211ENST00000561204 ARXQ96QS3 562 aa21.47■■□□□ 1.03
MEIS3-211ENST00000561204 OSBPL3Q9H4L5 887 aa21.47■■□□□ 1.03
MEIS3-211ENST00000561204 MAP3K5Q99683 1374 aa21.47■■□□□ 1.03
MEIS3-211ENST00000561204 FKBP5Q13451 457 aaPredicted RBP21.46■■□□□ 1.03
MEIS3-211ENST00000561204 CASC1Q6TDU7 716 aa21.46■■□□□ 1.03
MEIS3-211ENST00000561204 PDE1AP54750 535 aa21.45■■□□□ 1.02
MEIS3-211ENST00000561204 NECTIN2Q92692 538 aa21.45■■□□□ 1.02
MEIS3-211ENST00000561204 LTV1Q96GA3 475 aaPredicted RBP21.45■■□□□ 1.02
MEIS3-211ENST00000561204 EXOC6BQ9Y2D4 811 aa21.44■■□□□ 1.02
MEIS3-211ENST00000561204 TAF7Q15545 349 aaPredicted RBP21.43■■□□□ 1.02
MEIS3-211ENST00000561204 FAM43AQ8N2R8 423 aa21.43■■□□□ 1.02
MEIS3-211ENST00000561204 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms