RNA–Protein interactions for RNA: ENST00000561142.5

PSME1-209, Transcript of proteasome activator subunit 1, humanhuman

TSL 5

Gene PSME1, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-209ENST00000561142 SLC24A1O60721 1099 aa18.71■□□□□ 0.59
PSME1-209ENST00000561142 HSP90AB2PQ58FF8 381 aa18.7■□□□□ 0.58
PSME1-209ENST00000561142 SGIP1Q9BQI5 828 aa18.7■□□□□ 0.58
PSME1-209ENST00000561142 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
PSME1-209ENST00000561142 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
PSME1-209ENST00000561142 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
PSME1-209ENST00000561142 NSD2O96028 1365 aa18.68■□□□□ 0.58
PSME1-209ENST00000561142 AKT1S1Q96B36 256 aa18.68■□□□□ 0.58
PSME1-209ENST00000561142 SYT17Q9BSW7 474 aa18.68■□□□□ 0.58
PSME1-209ENST00000561142 DOT1LQ8TEK3 1739 aa18.68■□□□□ 0.58
PSME1-209ENST00000561142 NSD3Q9BZ95 1437 aa18.67■□□□□ 0.58
PSME1-209ENST00000561142 ARXQ96QS3 562 aa18.67■□□□□ 0.58
PSME1-209ENST00000561142 POLR3GLQ9BT43 218 aa18.67■□□□□ 0.58
PSME1-209ENST00000561142 EMILIN1Q9Y6C2 1016 aa18.67■□□□□ 0.58
PSME1-209ENST00000561142 SHANK3Q9BYB0 1731 aa18.66■□□□□ 0.58
PSME1-209ENST00000561142 SLC27A3Q5K4L6 730 aa18.66■□□□□ 0.58
PSME1-209ENST00000561142 KLHL34Q8N239 644 aa18.66■□□□□ 0.58
PSME1-209ENST00000561142 RAPGEF4Q8WZA2 1011 aa18.66■□□□□ 0.58
PSME1-209ENST00000561142 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
PSME1-209ENST00000561142 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
PSME1-209ENST00000561142 CDCA8Q53HL2 280 aa18.65■□□□□ 0.58
PSME1-209ENST00000561142 PNPLA7Q6ZV29 1317 aa18.65■□□□□ 0.58
PSME1-209ENST00000561142 TATP17735 454 aaPredicted RBP18.64■□□□□ 0.57
PSME1-209ENST00000561142 TFCP2L1Q9NZI6 479 aa18.64■□□□□ 0.57
PSME1-209ENST00000561142 KIF20BQ96Q89 1820 aa18.63■□□□□ 0.57
PSME1-209ENST00000561142 CCNL1Q9UK58 526 aaPredicted RBP18.63■□□□□ 0.57
PSME1-209ENST00000561142 INSRP06213 1382 aa18.63■□□□□ 0.57
PSME1-209ENST00000561142 FLT4P35916 1363 aa18.63■□□□□ 0.57
PSME1-209ENST00000561142 GOLGB1Q14789 3259 aaKnown RBP18.62■□□□□ 0.57
PSME1-209ENST00000561142 MSH5O43196 834 aa18.6■□□□□ 0.57
PSME1-209ENST00000561142 CYP27B1O15528 508 aa18.59■□□□□ 0.57
PSME1-209ENST00000561142 MPRIPQ6WCQ1 1025 aa18.59■□□□□ 0.57
PSME1-209ENST00000561142 TUBGCP6Q96RT7 1819 aa18.58■□□□□ 0.57
PSME1-209ENST00000561142 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.57
PSME1-209ENST00000561142 PCDH11XQ9BZA7 1347 aa18.58■□□□□ 0.57
PSME1-209ENST00000561142 PCDH11YQ9BZA8 1340 aa18.58■□□□□ 0.57
PSME1-209ENST00000561142 TNNT2P45379 298 aaPredicted RBP18.58■□□□□ 0.56
PSME1-209ENST00000561142 MSL1Q68DK7 614 aa18.58■□□□□ 0.56
PSME1-209ENST00000561142 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
PSME1-209ENST00000561142 LY75O60449 1722 aa18.57■□□□□ 0.56
PSME1-209ENST00000561142 POLD1P28340 1107 aa18.56■□□□□ 0.56
PSME1-209ENST00000561142 COL23A1Q86Y22 540 aaPredicted RBP18.56■□□□□ 0.56
PSME1-209ENST00000561142 SLC16A10Q8TF71 515 aa18.56■□□□□ 0.56
PSME1-209ENST00000561142 SMIM5Q71RC9 77 aa18.55■□□□□ 0.56
PSME1-209ENST00000561142 NLGN2Q8NFZ4 835 aa18.55■□□□□ 0.56
PSME1-209ENST00000561142 KIF24Q5T7B8 1368 aa18.55■□□□□ 0.56
PSME1-209ENST00000561142 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
PSME1-209ENST00000561142 GPR162Q16538 588 aa18.54■□□□□ 0.56
PSME1-209ENST00000561142 EYA1Q99502 592 aa18.54■□□□□ 0.56
PSME1-209ENST00000561142 ZNF784Q8NCA9 323 aaPredicted RBP18.53■□□□□ 0.56
PSME1-209ENST00000561142 POLKQ9UBT6 870 aa18.53■□□□□ 0.56
PSME1-209ENST00000561142 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
PSME1-209ENST00000561142 MAP3K5Q99683 1374 aa18.53■□□□□ 0.56
PSME1-209ENST00000561142 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.56
PSME1-209ENST00000561142 PIGBQ92521 554 aa18.52■□□□□ 0.56
PSME1-209ENST00000561142 QSER1Q2KHR3 1735 aa18.52■□□□□ 0.55
PSME1-209ENST00000561142 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
PSME1-209ENST00000561142 HSPA5P11021 654 aaKnown RBP18.51■□□□□ 0.55
PSME1-209ENST00000561142 AMIGO3Q86WK7 504 aa18.51■□□□□ 0.55
PSME1-209ENST00000561142 EIF4A2Q14240 407 aaKnown RBP18.49■□□□□ 0.55
PSME1-209ENST00000561142 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
PSME1-209ENST00000561142 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
PSME1-209ENST00000561142 PHF14O94880 888 aa18.48■□□□□ 0.55
PSME1-209ENST00000561142 PKD1L3Q7Z443 1732 aa18.48■□□□□ 0.55
PSME1-209ENST00000561142 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
PSME1-209ENST00000561142 C5P01031 1676 aa18.47■□□□□ 0.55
PSME1-209ENST00000561142 EIF4G2P78344 907 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■□□□□ 10.3
PSME1-209ENST00000561142 PANK3Q9H999 370 aa18.47■□□□□ 0.55
PSME1-209ENST00000561142 ANKRD26Q9UPS8 1709 aa18.46■□□□□ 0.55
PSME1-209ENST00000561142 CCER1Q8TC90 406 aaPredicted RBP18.46■□□□□ 0.55
PSME1-209ENST00000561142 AK7Q96M32 723 aa18.46■□□□□ 0.55
PSME1-209ENST00000561142 COL24A1Q17RW2 1714 aa18.46■□□□□ 0.55
PSME1-209ENST00000561142 MAP2P11137 1827 aaKnown RBP18.45■□□□□ 0.54
PSME1-209ENST00000561142 PHKG2P15735 406 aa18.45■□□□□ 0.54
PSME1-209ENST00000561142 YBX3P16989 372 aaKnown RBP eCLIP18.45■□□□□ 0.542e-6■■□□□ 14.4
PSME1-209ENST00000561142 NKX1-1Q15270 411 aaPredicted RBP18.45■□□□□ 0.54
PSME1-209ENST00000561142 SMARCC1Q92922 1105 aaPredicted RBP18.45■□□□□ 0.54
PSME1-209ENST00000561142 TMOD3Q9NYL9 352 aa18.45■□□□□ 0.54
PSME1-209ENST00000561142 ASAP1Q9ULH1 1129 aa18.45■□□□□ 0.54
PSME1-209ENST00000561142 ITGB4P16144 1822 aa18.44■□□□□ 0.54
PSME1-209ENST00000561142 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
PSME1-209ENST00000561142 LOC102724428A0A0B4J2F2 783 aa18.43■□□□□ 0.54
PSME1-209ENST00000561142 SIK1P57059 783 aa18.43■□□□□ 0.54
PSME1-209ENST00000561142 WWC3Q9ULE0 1092 aa18.43■□□□□ 0.54
PSME1-209ENST00000561142 C4BP0C0L5 1744 aa18.43■□□□□ 0.54
PSME1-209ENST00000561142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.42■□□□□ 0.54
PSME1-209ENST00000561142 ITPK1Q13572 414 aa18.42■□□□□ 0.54
PSME1-209ENST00000561142 IFNL2Q8IZJ0 200 aa18.42■□□□□ 0.54
PSME1-209ENST00000561142 TAF1LQ8IZX4 1826 aa18.41■□□□□ 0.54
PSME1-209ENST00000561142 AEBP1Q8IUX7 1158 aa18.4■□□□□ 0.54
PSME1-209ENST00000561142 FLAD1Q8NFF5 587 aa18.4■□□□□ 0.54
PSME1-209ENST00000561142 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
PSME1-209ENST00000561142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.4■□□□□ 0.541e-9■□□□□ 11.2
PSME1-209ENST00000561142 GNPATO15228 680 aa18.39■□□□□ 0.53
PSME1-209ENST00000561142 ATP6V1AP38606 617 aa18.39■□□□□ 0.53
PSME1-209ENST00000561142 MORC1Q86VD1 984 aa18.39■□□□□ 0.53
PSME1-209ENST00000561142 IGSF1Q8N6C5 1336 aa18.39■□□□□ 0.53
PSME1-209ENST00000561142 CHD4Q14839 1912 aa18.38■□□□□ 0.53
PSME1-209ENST00000561142 ZNF530Q6P9A1 599 aaPredicted RBP18.36■□□□□ 0.53
PSME1-209ENST00000561142 SLC4A9Q96Q91 983 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms