RNA–Protein interactions for RNA: ENST00000561088.1

SPG21-214, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-214ENST00000561088 MEGF6O75095 1541 aa16.8■□□□□ 0.28
SPG21-214ENST00000561088 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
SPG21-214ENST00000561088 TATP17735 454 aaPredicted RBP16.79■□□□□ 0.28
SPG21-214ENST00000561088 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
SPG21-214ENST00000561088 KCNQ2O43526 872 aa16.78■□□□□ 0.28
SPG21-214ENST00000561088 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
SPG21-214ENST00000561088 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.28
SPG21-214ENST00000561088 PLSCR1O15162 318 aa16.77■□□□□ 0.28
SPG21-214ENST00000561088 SYTL4Q96C24 671 aaPredicted RBP16.77■□□□□ 0.28
SPG21-214ENST00000561088 DOT1LQ8TEK3 1739 aa16.76■□□□□ 0.27
SPG21-214ENST00000561088 BTAF1O14981 1849 aa16.76■□□□□ 0.27
SPG21-214ENST00000561088 SHANK3Q9BYB0 1731 aa16.76■□□□□ 0.27
SPG21-214ENST00000561088 PCDH11XQ9BZA7 1347 aa16.73■□□□□ 0.27
SPG21-214ENST00000561088 PCDH11YQ9BZA8 1340 aa16.73■□□□□ 0.27
SPG21-214ENST00000561088 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
SPG21-214ENST00000561088 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
SPG21-214ENST00000561088 TXNRD1Q16881 649 aa16.72■□□□□ 0.27
SPG21-214ENST00000561088 LRP5O75197 1615 aa16.71■□□□□ 0.27
SPG21-214ENST00000561088 CC2D1BQ5T0F9 858 aaKnown RBP16.71■□□□□ 0.27
SPG21-214ENST00000561088 EYA1Q99502 592 aa16.71■□□□□ 0.27
SPG21-214ENST00000561088 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
SPG21-214ENST00000561088 AMER1Q5JTC6 1135 aaPredicted RBP16.7■□□□□ 0.26
SPG21-214ENST00000561088 STK32BQ9NY57 414 aa16.7■□□□□ 0.26
SPG21-214ENST00000561088 SPG7Q9UQ90 795 aa16.7■□□□□ 0.26
SPG21-214ENST00000561088 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
SPG21-214ENST00000561088 PROM2Q8N271 834 aa16.68■□□□□ 0.26
SPG21-214ENST00000561088 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
SPG21-214ENST00000561088 NCAPD2Q15021 1401 aa16.68■□□□□ 0.26
SPG21-214ENST00000561088 CYP27B1O15528 508 aa16.65■□□□□ 0.26
SPG21-214ENST00000561088 IGSF1Q8N6C5 1336 aa16.65■□□□□ 0.26
SPG21-214ENST00000561088 PER1O15534 1290 aaPredicted RBP16.64■□□□□ 0.25
SPG21-214ENST00000561088 SRCAPQ6ZRS2 3230 aa16.63■□□□□ 0.25
SPG21-214ENST00000561088 MTHFSP49914 203 aa16.63■□□□□ 0.25
SPG21-214ENST00000561088 SLC27A3Q5K4L6 730 aa16.63■□□□□ 0.25
SPG21-214ENST00000561088 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
SPG21-214ENST00000561088 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.63■□□□□ 0.25
SPG21-214ENST00000561088 PPP1R1BQ9UD71 204 aaPredicted RBP16.63■□□□□ 0.25
SPG21-214ENST00000561088 SLC15A2Q16348 729 aa16.62■□□□□ 0.25
SPG21-214ENST00000561088 SPON1Q9HCB6 807 aa16.62■□□□□ 0.25
SPG21-214ENST00000561088 TOGARAM1Q9Y4F4 1720 aa16.62■□□□□ 0.25
SPG21-214ENST00000561088 ITGB4P16144 1822 aa16.61■□□□□ 0.25
SPG21-214ENST00000561088 PLEKHO1Q53GL0 409 aaPredicted RBP16.61■□□□□ 0.25
SPG21-214ENST00000561088 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
SPG21-214ENST00000561088 CCNL1Q9UK58 526 aaPredicted RBP16.61■□□□□ 0.25
SPG21-214ENST00000561088 LY75O60449 1722 aa16.61■□□□□ 0.25
SPG21-214ENST00000561088 NPC1L1Q9UHC9 1359 aa16.61■□□□□ 0.25
SPG21-214ENST00000561088 PAPPAQ13219 1627 aa16.6■□□□□ 0.25
SPG21-214ENST00000561088 CASZ1Q86V15 1759 aa16.6■□□□□ 0.25
SPG21-214ENST00000561088 KCNQ4P56696 695 aa16.6■□□□□ 0.25
SPG21-214ENST00000561088 SULT6B1Q6IMI4 303 aa16.6■□□□□ 0.25
SPG21-214ENST00000561088 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
SPG21-214ENST00000561088 PLEKHG2Q9H7P9 1386 aa16.6■□□□□ 0.25
SPG21-214ENST00000561088 PHKG2P15735 406 aa16.59■□□□□ 0.25
SPG21-214ENST00000561088 ZNF530Q6P9A1 599 aaPredicted RBP16.59■□□□□ 0.25
SPG21-214ENST00000561088 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
SPG21-214ENST00000561088 TMOD3Q9NYL9 352 aa16.59■□□□□ 0.25
SPG21-214ENST00000561088 ZBTB7AO95365 584 aa16.58■□□□□ 0.24
SPG21-214ENST00000561088 IL13P35225 146 aa16.58■□□□□ 0.24
SPG21-214ENST00000561088 AMOTQ4VCS5 1084 aa16.58■□□□□ 0.24
SPG21-214ENST00000561088 C1orf141Q5JVX7 400 aa16.58■□□□□ 0.24
SPG21-214ENST00000561088 PALLDQ8WX93 1383 aa16.58■□□□□ 0.24
SPG21-214ENST00000561088 DIAPH1O60610 1272 aaKnown RBP16.57■□□□□ 0.24
SPG21-214ENST00000561088 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
SPG21-214ENST00000561088 NKX1-1Q15270 411 aaPredicted RBP16.57■□□□□ 0.24
SPG21-214ENST00000561088 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
SPG21-214ENST00000561088 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
SPG21-214ENST00000561088 TFCP2L1Q9NZI6 479 aa16.57■□□□□ 0.24
SPG21-214ENST00000561088 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
SPG21-214ENST00000561088 HMOX1P09601 288 aa16.55■□□□□ 0.24
SPG21-214ENST00000561088 HMGB2P26583 209 aaKnown RBP16.55■□□□□ 0.24
SPG21-214ENST00000561088 PIGBQ92521 554 aa16.55■□□□□ 0.24
SPG21-214ENST00000561088 CFAP53Q96M91 514 aa16.55■□□□□ 0.24
SPG21-214ENST00000561088 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
SPG21-214ENST00000561088 C5P01031 1676 aa16.55■□□□□ 0.24
SPG21-214ENST00000561088 U2SURPO15042 1029 aaKnown RBP16.54■□□□□ 0.24
SPG21-214ENST00000561088 MSH5O43196 834 aa16.54■□□□□ 0.24
SPG21-214ENST00000561088 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
SPG21-214ENST00000561088 KDRP35968 1356 aa16.53■□□□□ 0.24
SPG21-214ENST00000561088 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
SPG21-214ENST00000561088 TUBGCP6Q96RT7 1819 aa16.52■□□□□ 0.24
SPG21-214ENST00000561088 CABP4P57796 275 aa16.52■□□□□ 0.24
SPG21-214ENST00000561088 MTFR1LQ9H019 292 aa16.52■□□□□ 0.24
SPG21-214ENST00000561088 QSER1Q2KHR3 1735 aa16.52■□□□□ 0.24
SPG21-214ENST00000561088 TAF1LQ8IZX4 1826 aa16.51■□□□□ 0.23
SPG21-214ENST00000561088 ERVV-2B6SEH9 535 aa16.5■□□□□ 0.23
SPG21-214ENST00000561088 ASAP1Q9ULH1 1129 aa16.5■□□□□ 0.23
SPG21-214ENST00000561088 PNPLA7Q6ZV29 1317 aa16.49■□□□□ 0.23
SPG21-214ENST00000561088 COL3A1P02461 1466 aaPredicted RBP16.49■□□□□ 0.23
SPG21-214ENST00000561088 KDM6AO15550 1401 aaPredicted RBP16.49■□□□□ 0.23
SPG21-214ENST00000561088 AK7Q96M32 723 aa16.49■□□□□ 0.23
SPG21-214ENST00000561088 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
SPG21-214ENST00000561088 LOC102724428A0A0B4J2F2 783 aa16.48■□□□□ 0.23
SPG21-214ENST00000561088 SIK1P57059 783 aa16.48■□□□□ 0.23
SPG21-214ENST00000561088 NUDCQ9Y266 331 aa16.48■□□□□ 0.23
SPG21-214ENST00000561088 SCN11AQ9UI33 1791 aa16.47■□□□□ 0.23
SPG21-214ENST00000561088 PPP2R1AP30153 589 aa16.47■□□□□ 0.23
SPG21-214ENST00000561088 AKAP4Q5JQC9 854 aa16.47■□□□□ 0.23
SPG21-214ENST00000561088 SLC16A10Q8TF71 515 aa16.47■□□□□ 0.23
SPG21-214ENST00000561088 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
SPG21-214ENST00000561088 ATG3Q9NT62 314 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms