RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 PPM1GO15355 546 aaPredicted RBP25.87■■□□□ 1.73
LINC01220-202ENST00000561000 PTGER2P43116 358 aa25.87■■□□□ 1.73
LINC01220-202ENST00000561000 CCER1Q8TC90 406 aaPredicted RBP25.87■■□□□ 1.73
LINC01220-202ENST00000561000 EMILIN1Q9Y6C2 1016 aa25.87■■□□□ 1.73
LINC01220-202ENST00000561000 FAM208AQ9UK61 1670 aaKnown RBP25.87■■□□□ 1.73
LINC01220-202ENST00000561000 FLT4P35916 1363 aa25.86■■□□□ 1.73
LINC01220-202ENST00000561000 ZNF827Q17R98 1081 aa25.86■■□□□ 1.73
LINC01220-202ENST00000561000 SLC27A3Q5K4L6 730 aa25.86■■□□□ 1.73
LINC01220-202ENST00000561000 MTFR1LQ9H019 292 aa25.86■■□□□ 1.73
LINC01220-202ENST00000561000 KAT6BQ8WYB5 2073 aa25.86■■□□□ 1.73
LINC01220-202ENST00000561000 CGNL1Q0VF96 1302 aa25.86■■□□□ 1.73
LINC01220-202ENST00000561000 KCNQ4P56696 695 aa25.85■■□□□ 1.73
LINC01220-202ENST00000561000 CASZ1Q86V15 1759 aa25.84■■□□□ 1.73
LINC01220-202ENST00000561000 BTAF1O14981 1849 aa25.83■■□□□ 1.73
LINC01220-202ENST00000561000 KIF24Q5T7B8 1368 aa25.82■■□□□ 1.72
LINC01220-202ENST00000561000 EIF4G2P78344 907 aaKnown RBP eCLIP25.81■■□□□ 1.72
LINC01220-202ENST00000561000 AKT1S1Q96B36 256 aa25.81■■□□□ 1.72
LINC01220-202ENST00000561000 HSPA5P11021 654 aaKnown RBP25.8■■□□□ 1.72
LINC01220-202ENST00000561000 RGPD2P0DJD1 1756 aa25.79■■□□□ 1.72
LINC01220-202ENST00000561000 YY1P25490 414 aa25.79■■□□□ 1.72
LINC01220-202ENST00000561000 SGIP1Q9BQI5 828 aa25.78■■□□□ 1.72
LINC01220-202ENST00000561000 FHDC1Q9C0D6 1143 aaPredicted RBP25.78■■□□□ 1.72
LINC01220-202ENST00000561000 TFCP2L1Q9NZI6 479 aa25.78■■□□□ 1.72
LINC01220-202ENST00000561000 NSD2O96028 1365 aa25.78■■□□□ 1.72
LINC01220-202ENST00000561000 CCNL1Q9UK58 526 aaPredicted RBP25.77■■□□□ 1.72
LINC01220-202ENST00000561000 PCDH11XQ9BZA7 1347 aa25.77■■□□□ 1.72
LINC01220-202ENST00000561000 PCDH11YQ9BZA8 1340 aa25.77■■□□□ 1.72
LINC01220-202ENST00000561000 TNNT2P45379 298 aaPredicted RBP25.76■■□□□ 1.71
LINC01220-202ENST00000561000 ARXQ96QS3 562 aa25.76■■□□□ 1.71
LINC01220-202ENST00000561000 SYT17Q9BSW7 474 aa25.76■■□□□ 1.71
LINC01220-202ENST00000561000 MYOM1P52179 1685 aa25.76■■□□□ 1.71
LINC01220-202ENST00000561000 KIF20BQ96Q89 1820 aa25.76■■□□□ 1.71
LINC01220-202ENST00000561000 PAPPAQ13219 1627 aa25.74■■□□□ 1.71
LINC01220-202ENST00000561000 WASHC2AQ641Q2 1341 aa25.74■■□□□ 1.71
LINC01220-202ENST00000561000 CYP27B1O15528 508 aa25.74■■□□□ 1.71
LINC01220-202ENST00000561000 POLKQ9UBT6 870 aa25.74■■□□□ 1.71
LINC01220-202ENST00000561000 PNPLA7Q6ZV29 1317 aa25.73■■□□□ 1.71
LINC01220-202ENST00000561000 MPRIPQ6WCQ1 1025 aa25.73■■□□□ 1.71
LINC01220-202ENST00000561000 SLC16A10Q8TF71 515 aa25.72■■□□□ 1.71
LINC01220-202ENST00000561000 EYA1Q99502 592 aa25.72■■□□□ 1.71
LINC01220-202ENST00000561000 PANK3Q9H999 370 aa25.72■■□□□ 1.71
LINC01220-202ENST00000561000 DOT1LQ8TEK3 1739 aa25.71■■□□□ 1.71
LINC01220-202ENST00000561000 MSH5O43196 834 aa25.7■■□□□ 1.7
LINC01220-202ENST00000561000 SPG7Q9UQ90 795 aa25.7■■□□□ 1.7
LINC01220-202ENST00000561000 SHANK3Q9BYB0 1731 aa25.69■■□□□ 1.7
LINC01220-202ENST00000561000 POLD1P28340 1107 aa25.68■■□□□ 1.7
LINC01220-202ENST00000561000 KLHL34Q8N239 644 aa25.67■■□□□ 1.7
LINC01220-202ENST00000561000 EIF4A2Q14240 407 aaKnown RBP25.65■■□□□ 1.7
LINC01220-202ENST00000561000 PALLDQ8WX93 1383 aa25.64■■□□□ 1.69
LINC01220-202ENST00000561000 NKX1-1Q15270 411 aaPredicted RBP25.63■■□□□ 1.69
LINC01220-202ENST00000561000 COL23A1Q86Y22 540 aaPredicted RBP25.63■■□□□ 1.69
LINC01220-202ENST00000561000 PIGBQ92521 554 aa25.63■■□□□ 1.69
LINC01220-202ENST00000561000 SMARCC1Q92922 1105 aaPredicted RBP25.63■■□□□ 1.69
LINC01220-202ENST00000561000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.62■■□□□ 1.69
LINC01220-202ENST00000561000 NCAPD2Q15021 1401 aa25.62■■□□□ 1.69
LINC01220-202ENST00000561000 HMGB2P26583 209 aaKnown RBP25.6■■□□□ 1.69
LINC01220-202ENST00000561000 MORC1Q86VD1 984 aa25.6■■□□□ 1.69
LINC01220-202ENST00000561000 IFNL2Q8IZJ0 200 aa25.6■■□□□ 1.69
LINC01220-202ENST00000561000 LY75O60449 1722 aa25.59■■□□□ 1.69
LINC01220-202ENST00000561000 PHKG2P15735 406 aa25.58■■□□□ 1.69
LINC01220-202ENST00000561000 MSL1Q68DK7 614 aa25.58■■□□□ 1.69
LINC01220-202ENST00000561000 MAP3K5Q99683 1374 aa25.57■■□□□ 1.68
LINC01220-202ENST00000561000 GPR162Q16538 588 aa25.57■■□□□ 1.68
LINC01220-202ENST00000561000 TMOD3Q9NYL9 352 aa25.57■■□□□ 1.68
LINC01220-202ENST00000561000 KNSTRNQ9Y448 316 aa25.57■■□□□ 1.68
LINC01220-202ENST00000561000 MAP2P11137 1827 aaKnown RBP25.56■■□□□ 1.68
LINC01220-202ENST00000561000 FLAD1Q8NFF5 587 aa25.55■■□□□ 1.68
LINC01220-202ENST00000561000 AK7Q96M32 723 aa25.55■■□□□ 1.68
LINC01220-202ENST00000561000 PELP1Q8IZL8 1130 aaKnown RBP25.54■■□□□ 1.68
LINC01220-202ENST00000561000 ASAP1Q9ULH1 1129 aa25.54■■□□□ 1.68
LINC01220-202ENST00000561000 ANKRD26Q9UPS8 1709 aa25.54■■□□□ 1.68
LINC01220-202ENST00000561000 IGSF1Q8N6C5 1336 aa25.53■■□□□ 1.68
LINC01220-202ENST00000561000 PKD1L3Q7Z443 1732 aa25.52■■□□□ 1.68
LINC01220-202ENST00000561000 LOC102724428A0A0B4J2F2 783 aa25.52■■□□□ 1.68
LINC01220-202ENST00000561000 SIK1P57059 783 aa25.52■■□□□ 1.68
LINC01220-202ENST00000561000 NLGN2Q8NFZ4 835 aa25.52■■□□□ 1.68
LINC01220-202ENST00000561000 QSER1Q2KHR3 1735 aa25.51■■□□□ 1.68
LINC01220-202ENST00000561000 PHF14O94880 888 aa25.51■■□□□ 1.67
LINC01220-202ENST00000561000 PLEKHO1Q53GL0 409 aaPredicted RBP25.51■■□□□ 1.67
LINC01220-202ENST00000561000 SMIM5Q71RC9 77 aa25.51■■□□□ 1.67
LINC01220-202ENST00000561000 TUBGCP6Q96RT7 1819 aa25.49■■□□□ 1.67
LINC01220-202ENST00000561000 TOGARAM1Q9Y4F4 1720 aa25.49■■□□□ 1.67
LINC01220-202ENST00000561000 ATP6V1AP38606 617 aa25.48■■□□□ 1.67
LINC01220-202ENST00000561000 AMIGO3Q86WK7 504 aa25.48■■□□□ 1.67
LINC01220-202ENST00000561000 LINC00116Q8NCU8 138 aa25.48■■□□□ 1.67
LINC01220-202ENST00000561000 ATG3Q9NT62 314 aa25.48■■□□□ 1.67
LINC01220-202ENST00000561000 ZNF530Q6P9A1 599 aaPredicted RBP25.47■■□□□ 1.67
LINC01220-202ENST00000561000 KIF7Q2M1P5 1343 aa25.46■■□□□ 1.67
LINC01220-202ENST00000561000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.46■■□□□ 1.67
LINC01220-202ENST00000561000 HSP90AB1P08238 724 aaKnown RBP25.46■■□□□ 1.67
LINC01220-202ENST00000561000 ITPK1Q13572 414 aa25.46■■□□□ 1.67
LINC01220-202ENST00000561000 AMOTQ4VCS5 1084 aa25.46■■□□□ 1.67
LINC01220-202ENST00000561000 AEBP1Q8IUX7 1158 aa25.46■■□□□ 1.67
LINC01220-202ENST00000561000 ZNF784Q8NCA9 323 aaPredicted RBP25.46■■□□□ 1.67
LINC01220-202ENST00000561000 ERVV-2B6SEH9 535 aa25.45■■□□□ 1.66
LINC01220-202ENST00000561000 DCAF5Q96JK2 942 aa25.45■■□□□ 1.66
LINC01220-202ENST00000561000 C5P01031 1676 aa25.45■■□□□ 1.66
LINC01220-202ENST00000561000 ITGB4P16144 1822 aa25.44■■□□□ 1.66
LINC01220-202ENST00000561000 AMER1Q5JTC6 1135 aaPredicted RBP25.44■■□□□ 1.66
LINC01220-202ENST00000561000 SULT6B1Q6IMI4 303 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms