RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CCDC116Q8IYX3 515 aa7.05□□□□□ -1.28
HERC1-211ENST00000560983 LINC00528Q8N1L1 170 aa7.05□□□□□ -1.28
HERC1-211ENST00000560983 GOPCQ9HD26 462 aa7.05□□□□□ -1.28
HERC1-211ENST00000560983 GPSM3Q9Y4H4 160 aa7.05□□□□□ -1.28
HERC1-211ENST00000560983 EMILIN1Q9Y6C2 1016 aa7.05□□□□□ -1.28
HERC1-211ENST00000560983 ERBB4Q15303 1308 aa7.04□□□□□ -1.28
HERC1-211ENST00000560983 PTPRGP23470 1445 aa7.04□□□□□ -1.28
HERC1-211ENST00000560983 MAGEB6P1A0A0J9YX57 407 aa7.04□□□□□ -1.28
HERC1-211ENST00000560983 IRF7Q92985 503 aa7.04□□□□□ -1.28
HERC1-211ENST00000560983 CDV3Q9UKY7 258 aaKnown RBP7.04□□□□□ -1.28
HERC1-211ENST00000560983 SOS2Q07890 1332 aaPredicted RBP7.03□□□□□ -1.28
HERC1-211ENST00000560983 EPRSP07814 1512 aaKnown RBP7.03□□□□□ -1.28
HERC1-211ENST00000560983 ABCC2Q92887 1545 aa7.03□□□□□ -1.28
HERC1-211ENST00000560983 GMPRP36959 345 aa7.03□□□□□ -1.28
HERC1-211ENST00000560983 Q6ZVU0 165 aa7.03□□□□□ -1.28
HERC1-211ENST00000560983 ARHGAP9Q9BRR9 750 aa7.03□□□□□ -1.28
HERC1-211ENST00000560983 PCF11O94913 1555 aaKnown RBP7.03□□□□□ -1.28
HERC1-211ENST00000560983 SPATA31D1Q6ZQQ2 1576 aa7.03□□□□□ -1.28
HERC1-211ENST00000560983 TTBK1Q5TCY1 1321 aaPredicted RBP7.02□□□□□ -1.28
HERC1-211ENST00000560983 SOBPA7XYQ1 873 aa7.02□□□□□ -1.29
HERC1-211ENST00000560983 SLC24A1O60721 1099 aa7.02□□□□□ -1.29
HERC1-211ENST00000560983 CARD14Q9BXL6 1004 aa7.02□□□□□ -1.29
HERC1-211ENST00000560983 HMX1Q9NP08 348 aaPredicted RBP7.02□□□□□ -1.29
HERC1-211ENST00000560983 TEX14Q8IWB6 1497 aa7.02□□□□□ -1.29
HERC1-211ENST00000560983 WRNQ14191 1432 aaPredicted RBP eCLIP7.01□□□□□ -1.29
HERC1-211ENST00000560983 USP17L8P0C7I0 530 aa7.01□□□□□ -1.29
HERC1-211ENST00000560983 RFC5P40937 340 aa7.01□□□□□ -1.29
HERC1-211ENST00000560983 VEGFBP49765 207 aa7.01□□□□□ -1.29
HERC1-211ENST00000560983 PPP1R26Q5T8A7 1209 aaPredicted RBP7.01□□□□□ -1.29
HERC1-211ENST00000560983 EPS8L1Q8TE68 723 aa7.01□□□□□ -1.29
HERC1-211ENST00000560983 AP1G2O75843 785 aa7□□□□□ -1.29
HERC1-211ENST00000560983 PTK2Q05397 1052 aa7□□□□□ -1.29
HERC1-211ENST00000560983 INTS6LQ5JSJ4 861 aaKnown RBP7□□□□□ -1.29
HERC1-211ENST00000560983 C6orf118Q5T5N4 469 aa7□□□□□ -1.29
HERC1-211ENST00000560983 KCTD15Q96SI1 283 aaPredicted RBP7□□□□□ -1.29
HERC1-211ENST00000560983 TSEN34Q9BSV6 310 aaKnown RBP7□□□□□ -1.29
HERC1-211ENST00000560983 DNMT3LQ9UJW3 386 aa7□□□□□ -1.29
HERC1-211ENST00000560983 ERICH3Q5RHP9 1530 aa7□□□□□ -1.29
HERC1-211ENST00000560983 BMP2P12643 396 aa6.99□□□□□ -1.29
HERC1-211ENST00000560983 ADAM32Q8TC27 787 aa6.99□□□□□ -1.29
HERC1-211ENST00000560983 SLC10A4Q96EP9 437 aa6.99□□□□□ -1.29
HERC1-211ENST00000560983 TRIM34Q9BYJ4 488 aa6.99□□□□□ -1.29
HERC1-211ENST00000560983 TNIKQ9UKE5 1360 aa6.98□□□□□ -1.29
HERC1-211ENST00000560983 RUSC2Q8N2Y8 1516 aa6.98□□□□□ -1.29
HERC1-211ENST00000560983 KIAA0586Q9BVV6 1533 aa6.98□□□□□ -1.29
HERC1-211ENST00000560983 SPINT1O43278 529 aa6.98□□□□□ -1.29
HERC1-211ENST00000560983 UPP2O95045 317 aa6.98□□□□□ -1.29
HERC1-211ENST00000560983 ZBTB33Q86T24 672 aa6.98□□□□□ -1.29
HERC1-211ENST00000560983 PGPEP1Q9NXJ5 209 aa6.98□□□□□ -1.29
HERC1-211ENST00000560983 UHRF1BP1LA0JNW5 1464 aa6.98□□□□□ -1.29
HERC1-211ENST00000560983 MAP3K4Q9Y6R4 1608 aa6.98□□□□□ -1.29
HERC1-211ENST00000560983 ESPNB1AK53 854 aa6.97□□□□□ -1.29
HERC1-211ENST00000560983 MAN1A2O60476 641 aa6.97□□□□□ -1.29
HERC1-211ENST00000560983 PPFIA3O75145 1194 aa6.97□□□□□ -1.29
HERC1-211ENST00000560983 DHX9Q08211 1270 aaKnown RBP6.97□□□□□ -1.29
HERC1-211ENST00000560983 CBLBQ13191 982 aa6.97□□□□□ -1.29
HERC1-211ENST00000560983 ADAMTSL3P82987 1691 aa6.96□□□□□ -1.29
HERC1-211ENST00000560983 UACAQ9BZF9 1416 aa6.96□□□□□ -1.3
HERC1-211ENST00000560983 GJD4Q96KN9 370 aaPredicted RBP6.96□□□□□ -1.3
HERC1-211ENST00000560983 CD109Q6YHK3 1445 aa6.95□□□□□ -1.3
HERC1-211ENST00000560983 TMEM259Q4ZIN3 620 aa6.95□□□□□ -1.3
HERC1-211ENST00000560983 ZSCAN1Q8NBB4 408 aa6.95□□□□□ -1.3
HERC1-211ENST00000560983 PNMA1Q8ND90 353 aa6.95□□□□□ -1.3
HERC1-211ENST00000560983 PCMTD1Q96MG8 357 aaPredicted RBP6.95□□□□□ -1.3
HERC1-211ENST00000560983 MAGI3Q5TCQ9 1506 aa6.95□□□□□ -1.3
HERC1-211ENST00000560983 KDM5BQ9UGL1 1544 aa6.95□□□□□ -1.3
HERC1-211ENST00000560983 TTLL8A6PVC2 850 aa6.94□□□□□ -1.3
HERC1-211ENST00000560983 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.94□□□□□ -1.3
HERC1-211ENST00000560983 NBPF20Q3BBV1 942 aa6.94□□□□□ -1.3
HERC1-211ENST00000560983 KIF21BO75037 1637 aa6.94□□□□□ -1.3
HERC1-211ENST00000560983 LILRA1O75019 489 aa6.93□□□□□ -1.3
HERC1-211ENST00000560983 RAPGEF3O95398 923 aa6.93□□□□□ -1.3
HERC1-211ENST00000560983 KDF1Q8NAX2 398 aaPredicted RBP6.93□□□□□ -1.3
HERC1-211ENST00000560983 BRPF1P55201 1214 aaPredicted RBP6.92□□□□□ -1.3
HERC1-211ENST00000560983 SEPT12Q8IYM1 358 aa6.92□□□□□ -1.3
HERC1-211ENST00000560983 NANOS1Q8WY41 292 aaKnown RBP6.92□□□□□ -1.3
HERC1-211ENST00000560983 ARID4BQ4LE39 1312 aaPredicted RBP6.92□□□□□ -1.3
HERC1-211ENST00000560983 IGF1RP08069 1367 aa6.92□□□□□ -1.3
HERC1-211ENST00000560983 ARAP3Q8WWN8 1544 aa6.91□□□□□ -1.3
HERC1-211ENST00000560983 SLC35F4A4IF30 521 aa6.91□□□□□ -1.3
HERC1-211ENST00000560983 GPR37L1O60883 481 aa6.91□□□□□ -1.3
HERC1-211ENST00000560983 PTSQ03393 145 aa6.91□□□□□ -1.3
HERC1-211ENST00000560983 NEUROD2Q15784 382 aa6.91□□□□□ -1.3
HERC1-211ENST00000560983 ZNF784Q8NCA9 323 aaPredicted RBP6.91□□□□□ -1.3
HERC1-211ENST00000560983 TMPRSS4Q9NRS4 437 aa6.91□□□□□ -1.3
HERC1-211ENST00000560983 CARMIL2Q6F5E8 1435 aa6.91□□□□□ -1.3
HERC1-211ENST00000560983 YEATS2Q9ULM3 1422 aa6.91□□□□□ -1.3
HERC1-211ENST00000560983 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.3
HERC1-211ENST00000560983 ERVH48-1M5A8F1 160 aa6.9□□□□□ -1.3
HERC1-211ENST00000560983 ADH1AP07327 375 aa6.9□□□□□ -1.3
HERC1-211ENST00000560983 ADD1P35611 737 aaKnown RBP6.9□□□□□ -1.3
HERC1-211ENST00000560983 DZIP3Q86Y13 1208 aaKnown RBP6.9□□□□□ -1.3
HERC1-211ENST00000560983 AGBL1Q96MI9 1066 aa6.9□□□□□ -1.3
HERC1-211ENST00000560983 ATP1B4Q9UN42 357 aaPredicted RBP6.9□□□□□ -1.3
HERC1-211ENST00000560983 WDR7Q9Y4E6 1490 aa6.9□□□□□ -1.31
HERC1-211ENST00000560983 ZBBXA8MT70 800 aa6.89□□□□□ -1.31
HERC1-211ENST00000560983 CTSOP43234 321 aaPredicted RBP6.89□□□□□ -1.31
HERC1-211ENST00000560983 KRT76Q01546 638 aa6.89□□□□□ -1.31
HERC1-211ENST00000560983 GPR161Q8N6U8 529 aaKnown RBP6.89□□□□□ -1.31
HERC1-211ENST00000560983 BANK1Q8NDB2 785 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms