RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 SULT6B1Q6IMI4 303 aa22.44■■□□□ 1.18
RPL28-211ENST00000560881 SBF2Q86WG5 1849 aa22.44■■□□□ 1.18
RPL28-211ENST00000560881 HMOX1P09601 288 aa22.42■■□□□ 1.18
RPL28-211ENST00000560881 DDX54Q8TDD1 881 aaKnown RBP22.42■■□□□ 1.18
RPL28-211ENST00000560881 CFAP53Q96M91 514 aa22.42■■□□□ 1.18
RPL28-211ENST00000560881 MYBBP1AQ9BQG0 1328 aaKnown RBP22.42■■□□□ 1.18
RPL28-211ENST00000560881 U2SURPO15042 1029 aaKnown RBP22.42■■□□□ 1.18
RPL28-211ENST00000560881 ZCRB1Q8TBF4 217 aaKnown RBP22.41■■□□□ 1.18
RPL28-211ENST00000560881 TNS1Q9HBL0 1735 aaKnown RBP22.4■■□□□ 1.18
RPL28-211ENST00000560881 KDRP35968 1356 aa22.4■■□□□ 1.18
RPL28-211ENST00000560881 KAT6BQ8WYB5 2073 aa22.4■■□□□ 1.18
RPL28-211ENST00000560881 FAM196AQ6ZSG2 479 aa22.39■■□□□ 1.18
RPL28-211ENST00000560881 DOT1LQ8TEK3 1739 aa22.38■■□□□ 1.17
RPL28-211ENST00000560881 TRIM37O94972 964 aa22.37■■□□□ 1.17
RPL28-211ENST00000560881 PTF1AQ7RTS3 328 aa22.36■■□□□ 1.17
RPL28-211ENST00000560881 CYP27B1O15528 508 aa22.35■■□□□ 1.17
RPL28-211ENST00000560881 ACSBG1Q96GR2 724 aa22.35■■□□□ 1.17
RPL28-211ENST00000560881 PCDH11XQ9BZA7 1347 aa22.35■■□□□ 1.17
RPL28-211ENST00000560881 PCDH11YQ9BZA8 1340 aa22.35■■□□□ 1.17
RPL28-211ENST00000560881 NHSQ6T4R5 1651 aa22.34■■□□□ 1.17
RPL28-211ENST00000560881 TOGARAM1Q9Y4F4 1720 aa22.34■■□□□ 1.17
RPL28-211ENST00000560881 BCL9O00512 1426 aa22.33■■□□□ 1.17
RPL28-211ENST00000560881 U2AF1L5P0DN76 240 aaPredicted RBP22.33■■□□□ 1.16
RPL28-211ENST00000560881 U2AF1Q01081 240 aaKnown RBP eCLIP22.33■■□□□ 1.16
RPL28-211ENST00000560881 SPG7Q9UQ90 795 aa22.33■■□□□ 1.16
RPL28-211ENST00000560881 KCNQ2O43526 872 aa22.32■■□□□ 1.16
RPL28-211ENST00000560881 NUDCQ9Y266 331 aa22.32■■□□□ 1.16
RPL28-211ENST00000560881 ANP32CO43423 234 aa22.31■■□□□ 1.16
RPL28-211ENST00000560881 DEFB132Q7Z7B7 95 aa22.31■■□□□ 1.16
RPL28-211ENST00000560881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.3■■□□□ 1.16
RPL28-211ENST00000560881 RSPH6AQ9H0K4 717 aa22.3■■□□□ 1.16
RPL28-211ENST00000560881 PHKG2P15735 406 aa22.29■■□□□ 1.16
RPL28-211ENST00000560881 CCDC184Q52MB2 194 aa22.29■■□□□ 1.16
RPL28-211ENST00000560881 PLEKHO1Q53GL0 409 aaPredicted RBP22.29■■□□□ 1.16
RPL28-211ENST00000560881 BTAF1O14981 1849 aa22.29■■□□□ 1.16
RPL28-211ENST00000560881 PRKAR2BP31323 418 aa22.28■■□□□ 1.16
RPL28-211ENST00000560881 SF3B2Q13435 895 aaKnown RBP22.28■■□□□ 1.16
RPL28-211ENST00000560881 ZNF530Q6P9A1 599 aaPredicted RBP22.28■■□□□ 1.16
RPL28-211ENST00000560881 ITGB4P16144 1822 aa22.28■■□□□ 1.16
RPL28-211ENST00000560881 PLEKHG2Q9H7P9 1386 aa22.28■■□□□ 1.16
RPL28-211ENST00000560881 VIRMAQ69YN4 1812 aaKnown RBP22.27■■□□□ 1.16
RPL28-211ENST00000560881 CCDC125Q86Z20 511 aa22.26■■□□□ 1.15
RPL28-211ENST00000560881 PELP1Q8IZL8 1130 aaKnown RBP22.26■■□□□ 1.15
RPL28-211ENST00000560881 APBA3O96018 575 aa22.26■■□□□ 1.15
RPL28-211ENST00000560881 AMOTQ4VCS5 1084 aa22.26■■□□□ 1.15
RPL28-211ENST00000560881 IFNL2Q8IZJ0 200 aa22.26■■□□□ 1.15
RPL28-211ENST00000560881 SYTL4Q96C24 671 aaPredicted RBP22.26■■□□□ 1.15
RPL28-211ENST00000560881 PRIM1P49642 420 aaKnown RBP22.25■■□□□ 1.15
RPL28-211ENST00000560881 MTHFSDQ2M296 383 aaKnown RBP22.25■■□□□ 1.15
RPL28-211ENST00000560881 PHACTR3Q96KR7 559 aa22.25■■□□□ 1.15
RPL28-211ENST00000560881 BCL11BQ9C0K0 894 aaPredicted RBP22.25■■□□□ 1.15
RPL28-211ENST00000560881 EN1Q05925 392 aaPredicted RBP22.24■■□□□ 1.15
RPL28-211ENST00000560881 KDM6AO15550 1401 aaPredicted RBP22.24■■□□□ 1.15
RPL28-211ENST00000560881 NKX1-1Q15270 411 aaPredicted RBP22.23■■□□□ 1.15
RPL28-211ENST00000560881 FCHSD2O94868 740 aa22.22■■□□□ 1.15
RPL28-211ENST00000560881 BAG6P46379 1132 aa22.22■■□□□ 1.15
RPL28-211ENST00000560881 C1orf141Q5JVX7 400 aa22.22■■□□□ 1.15
RPL28-211ENST00000560881 SCN11AQ9UI33 1791 aa22.22■■□□□ 1.15
RPL28-211ENST00000560881 EZH2Q15910 746 aaKnown RBP22.2■■□□□ 1.14
RPL28-211ENST00000560881 MPRIPQ6WCQ1 1025 aa22.2■■□□□ 1.14
RPL28-211ENST00000560881 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
RPL28-211ENST00000560881 RGPD3A6NKT7 1758 aaPredicted RBP22.18■■□□□ 1.14
RPL28-211ENST00000560881 RGPD4Q7Z3J3 1758 aa22.18■■□□□ 1.14
RPL28-211ENST00000560881 WDR43Q15061 677 aaKnown RBP eCLIP22.18■■□□□ 1.14
RPL28-211ENST00000560881 AKAP4Q5JQC9 854 aa22.18■■□□□ 1.14
RPL28-211ENST00000560881 PLEKHF1Q96S99 279 aa22.18■■□□□ 1.14
RPL28-211ENST00000560881 RREB1Q92766 1687 aa22.18■■□□□ 1.14
RPL28-211ENST00000560881 DCAF5Q96JK2 942 aa22.17■■□□□ 1.14
RPL28-211ENST00000560881 CAMKK2Q96RR4 588 aa22.17■■□□□ 1.14
RPL28-211ENST00000560881 ADAMTS7Q9UKP4 1686 aa22.16■■□□□ 1.14
RPL28-211ENST00000560881 CCDC146Q8IYE0 955 aa22.16■■□□□ 1.14
RPL28-211ENST00000560881 GAS2L2Q8NHY3 880 aa22.16■■□□□ 1.14
RPL28-211ENST00000560881 LGR6Q9HBX8 967 aa22.16■■□□□ 1.14
RPL28-211ENST00000560881 MRS2Q9HD23 443 aa22.16■■□□□ 1.14
RPL28-211ENST00000560881 ADAMTS8Q9UP79 889 aa22.16■■□□□ 1.14
RPL28-211ENST00000560881 NUP188Q5SRE5 1749 aa22.16■■□□□ 1.14
RPL28-211ENST00000560881 HSP90AB1P08238 724 aaKnown RBP22.15■■□□□ 1.14
RPL28-211ENST00000560881 MAP3K5Q99683 1374 aa22.15■■□□□ 1.14
RPL28-211ENST00000560881 PIGBQ92521 554 aa22.14■■□□□ 1.14
RPL28-211ENST00000560881 LY75O60449 1722 aa22.13■■□□□ 1.13
RPL28-211ENST00000560881 PLSCR1O15162 318 aa22.13■■□□□ 1.13
RPL28-211ENST00000560881 DIEXFQ68CQ4 756 aaKnown RBP22.13■■□□□ 1.13
RPL28-211ENST00000560881 TMOD3Q9NYL9 352 aa22.13■■□□□ 1.13
RPL28-211ENST00000560881 MAPK8IP3Q9UPT6 1336 aa22.11■■□□□ 1.13
RPL28-211ENST00000560881 GNAT3A8MTJ3 354 aa22.11■■□□□ 1.13
RPL28-211ENST00000560881 RNMTO43148 476 aaKnown RBP22.11■■□□□ 1.13
RPL28-211ENST00000560881 PROM2Q8N271 834 aa22.11■■□□□ 1.13
RPL28-211ENST00000560881 MRC1P22897 1456 aa22.11■■□□□ 1.13
RPL28-211ENST00000560881 ERVV-2B6SEH9 535 aa22.1■■□□□ 1.13
RPL28-211ENST00000560881 NEFMP07197 916 aa22.1■■□□□ 1.13
RPL28-211ENST00000560881 CABP4P57796 275 aa22.1■■□□□ 1.13
RPL28-211ENST00000560881 KCNQ4P56696 695 aa22.09■■□□□ 1.13
RPL28-211ENST00000560881 TXNRD1Q16881 649 aa22.09■■□□□ 1.13
RPL28-211ENST00000560881 NFATC2IPQ8NCF5 419 aa22.09■■□□□ 1.13
RPL28-211ENST00000560881 IL17REQ8NFR9 667 aa22.09■■□□□ 1.13
RPL28-211ENST00000560881 ASAP1Q9ULH1 1129 aa22.09■■□□□ 1.13
RPL28-211ENST00000560881 SIPA1L3O60292 1781 aaPredicted RBP22.09■■□□□ 1.13
RPL28-211ENST00000560881 DCTN1Q14203 1278 aa22.08■■□□□ 1.13
RPL28-211ENST00000560881 PNISRQ8TF01 805 aaKnown RBP22.08■■□□□ 1.13
RPL28-211ENST00000560881 PNNQ9H307 717 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms