RNA–Protein interactions for RNA: ENST00000560868.1

CHRNB4-206, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 2

Gene CHRNB4, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-206ENST00000560868 NR5A1Q13285 461 aa6.29□□□□□ -1.4
CHRNB4-206ENST00000560868 C4orf48Q5BLP8 95 aa6.29□□□□□ -1.4
CHRNB4-206ENST00000560868 C6orf118Q5T5N4 469 aa6.29□□□□□ -1.4
CHRNB4-206ENST00000560868 BPHLQ86WA6 291 aaPredicted RBP6.29□□□□□ -1.4
CHRNB4-206ENST00000560868 PPP1R12CQ9BZL4 782 aa6.29□□□□□ -1.4
CHRNB4-206ENST00000560868 MAN1A2O60476 641 aa6.28□□□□□ -1.4
CHRNB4-206ENST00000560868 CFAP70Q5T0N1 1121 aa6.28□□□□□ -1.4
CHRNB4-206ENST00000560868 TRMT44Q8IYL2 757 aaKnown RBP6.28□□□□□ -1.4
CHRNB4-206ENST00000560868 BCCIPQ9P287 314 aaKnown RBP eCLIP6.28□□□□□ -1.4
CHRNB4-206ENST00000560868 PALM3A6NDB9 673 aaPredicted RBP6.27□□□□□ -1.41
CHRNB4-206ENST00000560868 VSIG8P0DPA2 414 aa6.27□□□□□ -1.41
CHRNB4-206ENST00000560868 RBM25P49756 843 aaKnown RBP6.27□□□□□ -1.41
CHRNB4-206ENST00000560868 ERFEQ4G0M1 354 aa6.27□□□□□ -1.41
CHRNB4-206ENST00000560868 ZBTB33Q86T24 672 aa6.27□□□□□ -1.41
CHRNB4-206ENST00000560868 CHIC2Q9UKJ5 165 aa6.27□□□□□ -1.41
CHRNB4-206ENST00000560868 MTMR7Q9Y216 660 aa6.27□□□□□ -1.41
CHRNB4-206ENST00000560868 ATP9BO43861 1147 aa6.26□□□□□ -1.41
CHRNB4-206ENST00000560868 PPP1R15AO75807 674 aaPredicted RBP6.26□□□□□ -1.41
CHRNB4-206ENST00000560868 UPP2O95045 317 aa6.26□□□□□ -1.41
CHRNB4-206ENST00000560868 BMP2P12643 396 aa6.26□□□□□ -1.41
CHRNB4-206ENST00000560868 SRPK2P78362 688 aaKnown RBP6.26□□□□□ -1.41
CHRNB4-206ENST00000560868 PHTF2Q8N3S3 785 aa6.26□□□□□ -1.41
CHRNB4-206ENST00000560868 CEP126Q9P2H0 1117 aa6.26□□□□□ -1.41
CHRNB4-206ENST00000560868 PCDHB9Q9Y5E1 797 aa6.26□□□□□ -1.41
CHRNB4-206ENST00000560868 MAFBQ9Y5Q3 323 aaPredicted RBP6.26□□□□□ -1.41
CHRNB4-206ENST00000560868 PPFIA3O75145 1194 aa6.25□□□□□ -1.41
CHRNB4-206ENST00000560868 TMCO4Q5TGY1 634 aa6.25□□□□□ -1.41
CHRNB4-206ENST00000560868 TBC1D9Q6ZT07 1266 aa6.25□□□□□ -1.41
CHRNB4-206ENST00000560868 MAGEB6P1A0A0J9YX57 407 aa6.24□□□□□ -1.41
CHRNB4-206ENST00000560868 ESPNB1AK53 854 aa6.24□□□□□ -1.41
CHRNB4-206ENST00000560868 PIK3CDO00329 1044 aa6.24□□□□□ -1.41
CHRNB4-206ENST00000560868 PLEKHM2Q8IWE5 1019 aa6.24□□□□□ -1.41
CHRNB4-206ENST00000560868 LINC00528Q8N1L1 170 aa6.24□□□□□ -1.41
CHRNB4-206ENST00000560868 PBXIP1Q96AQ6 731 aa6.24□□□□□ -1.41
CHRNB4-206ENST00000560868 CARD14Q9BXL6 1004 aa6.24□□□□□ -1.41
CHRNB4-206ENST00000560868 TFIP11Q9UBB9 837 aaKnown RBP6.24□□□□□ -1.41
CHRNB4-206ENST00000560868 CDV3Q9UKY7 258 aaKnown RBP6.24□□□□□ -1.41
CHRNB4-206ENST00000560868 MAP4K5Q9Y4K4 846 aa6.24□□□□□ -1.41
CHRNB4-206ENST00000560868 E9PSI1 815 aa6.23□□□□□ -1.41
CHRNB4-206ENST00000560868 DZIP3Q86Y13 1208 aaKnown RBP6.23□□□□□ -1.41
CHRNB4-206ENST00000560868 MEIOBQ8N635 442 aa6.23□□□□□ -1.41
CHRNB4-206ENST00000560868 SLC10A4Q96EP9 437 aa6.23□□□□□ -1.41
CHRNB4-206ENST00000560868 TRAIPQ9BWF2 469 aa6.23□□□□□ -1.41
CHRNB4-206ENST00000560868 USP35Q9P2H5 1018 aa6.23□□□□□ -1.41
CHRNB4-206ENST00000560868 SOS2Q07890 1332 aaPredicted RBP6.23□□□□□ -1.41
CHRNB4-206ENST00000560868 FSHRP23945 695 aa6.22□□□□□ -1.41
CHRNB4-206ENST00000560868 NBPF20Q3BBV1 942 aa6.22□□□□□ -1.41
CHRNB4-206ENST00000560868 SLFNL1Q499Z3 407 aa6.22□□□□□ -1.41
CHRNB4-206ENST00000560868 VASH1Q7L8A9 365 aaPredicted RBP6.22□□□□□ -1.41
CHRNB4-206ENST00000560868 CCDC125Q86Z20 511 aa6.22□□□□□ -1.41
CHRNB4-206ENST00000560868 SEPT12Q8IYM1 358 aa6.22□□□□□ -1.41
CHRNB4-206ENST00000560868 DNMT3LQ9UJW3 386 aa6.22□□□□□ -1.41
CHRNB4-206ENST00000560868 USP17L3A6NCW0 530 aa6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 USP17L4A6NCW7 530 aa6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 USP17L5A8MUK1 530 aa6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 LZTS3O60299 673 aaPredicted RBP6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 LMOD1P29536 600 aaPredicted RBP6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 MAP7D1Q3KQU3 841 aa6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 FOXD4L5Q5VV16 416 aaPredicted RBP6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 USP17L2Q6R6M4 530 aa6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 USP17L1Q7RTZ2 530 aa6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 RNF135Q8IUD6 432 aa6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 FOXD4L4Q8WXT5 416 aaPredicted RBP6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 TSEN34Q9BSV6 310 aaKnown RBP6.21□□□□□ -1.42
CHRNB4-206ENST00000560868 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.2□□□□□ -1.42
CHRNB4-206ENST00000560868 SKIP12755 728 aa6.2□□□□□ -1.42
CHRNB4-206ENST00000560868 MFAP1P55081 439 aaKnown RBP6.2□□□□□ -1.42
CHRNB4-206ENST00000560868 KANK4Q5T7N3 995 aaPredicted RBP6.2□□□□□ -1.42
CHRNB4-206ENST00000560868 RNF20Q5VTR2 975 aa6.2□□□□□ -1.42
CHRNB4-206ENST00000560868 AEBP1Q8IUX7 1158 aa6.2□□□□□ -1.42
CHRNB4-206ENST00000560868 PLPP7Q8NBV4 271 aa6.2□□□□□ -1.42
CHRNB4-206ENST00000560868 ZNF428Q96B54 188 aa6.2□□□□□ -1.42
CHRNB4-206ENST00000560868 EMILIN1Q9Y6C2 1016 aa6.2□□□□□ -1.42
CHRNB4-206ENST00000560868 GIGYF1O75420 1035 aaPredicted RBP6.19□□□□□ -1.42
CHRNB4-206ENST00000560868 ATG7O95352 703 aa6.19□□□□□ -1.42
CHRNB4-206ENST00000560868 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.19□□□□□ -1.42
CHRNB4-206ENST00000560868 ZNF326Q5BKZ1 582 aaKnown RBP6.19□□□□□ -1.42
CHRNB4-206ENST00000560868 CCDC116Q8IYX3 515 aa6.19□□□□□ -1.42
CHRNB4-206ENST00000560868 GPR161Q8N6U8 529 aaKnown RBP6.19□□□□□ -1.42
CHRNB4-206ENST00000560868 CCDC85AQ96PX6 553 aaPredicted RBP6.19□□□□□ -1.42
CHRNB4-206ENST00000560868 FIGNL2A6NMB9 653 aa6.18□□□□□ -1.42
CHRNB4-206ENST00000560868 TTLL8A6PVC2 850 aa6.18□□□□□ -1.42
CHRNB4-206ENST00000560868 RFX1P22670 979 aa6.18□□□□□ -1.42
CHRNB4-206ENST00000560868 KCNMA1Q12791 1236 aa6.18□□□□□ -1.42
CHRNB4-206ENST00000560868 FAM177A1Q8N128 213 aaPredicted RBP6.18□□□□□ -1.42
CHRNB4-206ENST00000560868 KCTD15Q96SI1 283 aaPredicted RBP6.18□□□□□ -1.42
CHRNB4-206ENST00000560868 CLSTN1O94985 981 aa6.17□□□□□ -1.42
CHRNB4-206ENST00000560868 KRT76Q01546 638 aa6.17□□□□□ -1.42
CHRNB4-206ENST00000560868 PTSQ03393 145 aa6.17□□□□□ -1.42
CHRNB4-206ENST00000560868 NCOA4Q13772 614 aa6.17□□□□□ -1.42
CHRNB4-206ENST00000560868 ELOAQ14241 798 aaKnown RBP6.17□□□□□ -1.42
CHRNB4-206ENST00000560868 RETREG2Q8NC44 543 aa6.17□□□□□ -1.42
CHRNB4-206ENST00000560868 CNTNAP3BQ96NU0 1288 aa6.17□□□□□ -1.42
CHRNB4-206ENST00000560868 CNTNAP3Q9BZ76 1288 aa6.17□□□□□ -1.42
CHRNB4-206ENST00000560868 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
CHRNB4-206ENST00000560868 FAM196BA6NMK8 535 aa6.16□□□□□ -1.42
CHRNB4-206ENST00000560868 GSK3AP49840 483 aa6.16□□□□□ -1.42
CHRNB4-206ENST00000560868 CBLBQ13191 982 aa6.16□□□□□ -1.42
CHRNB4-206ENST00000560868 TSGA10IPQ3SY00 556 aa6.16□□□□□ -1.42
CHRNB4-206ENST00000560868 INTS6LQ5JSJ4 861 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms