RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
IRF9-211ENST00000560852 TNS2Q63HR2 1409 aa16.18■□□□□ 0.18
IRF9-211ENST00000560852 CCDC184Q52MB2 194 aa16.17■□□□□ 0.18
IRF9-211ENST00000560852 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
IRF9-211ENST00000560852 U2SURPO15042 1029 aaKnown RBP16.16■□□□□ 0.18
IRF9-211ENST00000560852 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
IRF9-211ENST00000560852 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
IRF9-211ENST00000560852 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
IRF9-211ENST00000560852 PLEKHO1Q53GL0 409 aaPredicted RBP16.16■□□□□ 0.18
IRF9-211ENST00000560852 KRT27Q7Z3Y8 459 aa16.16■□□□□ 0.18
IRF9-211ENST00000560852 SPG7Q9UQ90 795 aa16.16■□□□□ 0.18
IRF9-211ENST00000560852 PDE3BQ13370 1112 aa16.14■□□□□ 0.17
IRF9-211ENST00000560852 MARCH10Q8NA82 808 aaPredicted RBP16.14■□□□□ 0.17
IRF9-211ENST00000560852 ADAMTS8Q9UP79 889 aa16.14■□□□□ 0.17
IRF9-211ENST00000560852 RGPD2P0DJD1 1756 aa16.13■□□□□ 0.17
IRF9-211ENST00000560852 WNK3Q9BYP7 1800 aa16.13■□□□□ 0.17
IRF9-211ENST00000560852 CYP27B1O15528 508 aa16.13■□□□□ 0.17
IRF9-211ENST00000560852 HMOX1P09601 288 aa16.13■□□□□ 0.17
IRF9-211ENST00000560852 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
IRF9-211ENST00000560852 PCDH11XQ9BZA7 1347 aa16.13■□□□□ 0.17
IRF9-211ENST00000560852 PCDH11YQ9BZA8 1340 aa16.13■□□□□ 0.17
IRF9-211ENST00000560852 PRKAR2BP31323 418 aa16.12■□□□□ 0.17
IRF9-211ENST00000560852 FAM196AQ6ZSG2 479 aa16.12■□□□□ 0.17
IRF9-211ENST00000560852 IFNL2Q8IZJ0 200 aa16.12■□□□□ 0.17
IRF9-211ENST00000560852 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
IRF9-211ENST00000560852 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
IRF9-211ENST00000560852 HTATSF1O43719 755 aaKnown RBP16.11■□□□□ 0.17
IRF9-211ENST00000560852 PHKG2P15735 406 aa16.11■□□□□ 0.17
IRF9-211ENST00000560852 WDR43Q15061 677 aaKnown RBP eCLIP16.11■□□□□ 0.17
IRF9-211ENST00000560852 MIER1Q8N108 512 aa16.11■□□□□ 0.17
IRF9-211ENST00000560852 GAS2L2Q8NHY3 880 aa16.11■□□□□ 0.17
IRF9-211ENST00000560852 PHACTR3Q96KR7 559 aa16.11■□□□□ 0.17
IRF9-211ENST00000560852 HSP90AB1P08238 724 aaKnown RBP16.1■□□□□ 0.17
IRF9-211ENST00000560852 MTHFSDQ2M296 383 aaKnown RBP16.1■□□□□ 0.17
IRF9-211ENST00000560852 AKAP4Q5JQC9 854 aa16.1■□□□□ 0.17
IRF9-211ENST00000560852 ILDR2Q71H61 639 aa16.09■□□□□ 0.17
IRF9-211ENST00000560852 RUNDC1Q96C34 613 aa16.09■□□□□ 0.17
IRF9-211ENST00000560852 CCDC125Q86Z20 511 aa16.08■□□□□ 0.16
IRF9-211ENST00000560852 DCAF5Q96JK2 942 aa16.08■□□□□ 0.16
IRF9-211ENST00000560852 A0A0G2JS52 829 aa16.06■□□□□ 0.16
IRF9-211ENST00000560852 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
IRF9-211ENST00000560852 MYT1Q01538 1121 aa16.06■□□□□ 0.16
IRF9-211ENST00000560852 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
IRF9-211ENST00000560852 DDX54Q8TDD1 881 aaKnown RBP16.06■□□□□ 0.16
IRF9-211ENST00000560852 SHANK3Q9BYB0 1731 aa16.05■□□□□ 0.16
IRF9-211ENST00000560852 NEFMP07197 916 aa16.05■□□□□ 0.16
IRF9-211ENST00000560852 NFE2L2Q16236 605 aa16.05■□□□□ 0.16
IRF9-211ENST00000560852 ZNF530Q6P9A1 599 aaPredicted RBP16.05■□□□□ 0.16
IRF9-211ENST00000560852 CEMIPQ8WUJ3 1361 aa16.04■□□□□ 0.16
IRF9-211ENST00000560852 GNAT3A8MTJ3 354 aa16.04■□□□□ 0.16
IRF9-211ENST00000560852 C1orf141Q5JVX7 400 aa16.04■□□□□ 0.16
IRF9-211ENST00000560852 BCL11BQ9C0K0 894 aaPredicted RBP16.04■□□□□ 0.16
IRF9-211ENST00000560852 BRWD3Q6RI45 1802 aa16.03■□□□□ 0.16
IRF9-211ENST00000560852 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
IRF9-211ENST00000560852 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
IRF9-211ENST00000560852 CCDC27Q2M243 656 aa16.03■□□□□ 0.16
IRF9-211ENST00000560852 MAP3K5Q99683 1374 aa16.02■□□□□ 0.16
IRF9-211ENST00000560852 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
IRF9-211ENST00000560852 RNMTO43148 476 aaKnown RBP16.01■□□□□ 0.15
IRF9-211ENST00000560852 IL17REQ8NFR9 667 aa16.01■□□□□ 0.15
IRF9-211ENST00000560852 KDM6AO15550 1401 aaPredicted RBP16.01■□□□□ 0.15
IRF9-211ENST00000560852 MRC1P22897 1456 aa15.99■□□□□ 0.15
IRF9-211ENST00000560852 PLSCR1O15162 318 aa15.99■□□□□ 0.15
IRF9-211ENST00000560852 LMOD3Q0VAK6 560 aa15.99■□□□□ 0.15
IRF9-211ENST00000560852 FAM182BQ5T319 152 aa15.99■□□□□ 0.15
IRF9-211ENST00000560852 PRIM1P49642 420 aaKnown RBP15.98■□□□□ 0.15
IRF9-211ENST00000560852 UPF1Q92900 1129 aaKnown RBP eCLIP15.98■□□□□ 0.15
IRF9-211ENST00000560852 LGR6Q9HBX8 967 aa15.98■□□□□ 0.15
IRF9-211ENST00000560852 BABAM1Q9NWV8 329 aa15.98■□□□□ 0.15
IRF9-211ENST00000560852 TRIM35Q9UPQ4 493 aa15.98■□□□□ 0.15
IRF9-211ENST00000560852 EP400Q96L91 3159 aa15.98■□□□□ 0.15
IRF9-211ENST00000560852 APAF1O14727 1248 aa15.97■□□□□ 0.15
IRF9-211ENST00000560852 RIPK4P57078 832 aa15.97■□□□□ 0.15
IRF9-211ENST00000560852 MPRIPQ6WCQ1 1025 aa15.97■□□□□ 0.15
IRF9-211ENST00000560852 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
IRF9-211ENST00000560852 KCNQ2O43526 872 aa15.96■□□□□ 0.15
IRF9-211ENST00000560852 CCDC146Q8IYE0 955 aa15.96■□□□□ 0.15
IRF9-211ENST00000560852 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.15
IRF9-211ENST00000560852 PIGBQ92521 554 aa15.96■□□□□ 0.15
IRF9-211ENST00000560852 RTF1Q92541 710 aaKnown RBP15.96■□□□□ 0.15
IRF9-211ENST00000560852 NHSQ6T4R5 1651 aa15.95■□□□□ 0.14
IRF9-211ENST00000560852 TRIM37O94972 964 aa15.94■□□□□ 0.14
IRF9-211ENST00000560852 HMGB2P26583 209 aaKnown RBP15.94■□□□□ 0.14
IRF9-211ENST00000560852 CABP4P57796 275 aa15.94■□□□□ 0.14
IRF9-211ENST00000560852 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
IRF9-211ENST00000560852 PTF1AQ7RTS3 328 aa15.93■□□□□ 0.14
IRF9-211ENST00000560852 SMARCC1Q92922 1105 aaPredicted RBP15.93■□□□□ 0.14
IRF9-211ENST00000560852 TMOD3Q9NYL9 352 aa15.93■□□□□ 0.14
IRF9-211ENST00000560852 SBF2Q86WG5 1849 aa15.92■□□□□ 0.14
IRF9-211ENST00000560852 SOCS7O14512 581 aa15.92■□□□□ 0.14
IRF9-211ENST00000560852 TAF7Q15545 349 aaPredicted RBP15.92■□□□□ 0.14
IRF9-211ENST00000560852 ACSBG1Q96GR2 724 aa15.92■□□□□ 0.14
IRF9-211ENST00000560852 IL16Q14005 1332 aa15.92■□□□□ 0.14
IRF9-211ENST00000560852 ZNF521Q96K83 1311 aa15.92■□□□□ 0.14
IRF9-211ENST00000560852 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
IRF9-211ENST00000560852 SCN11AQ9UI33 1791 aa15.91■□□□□ 0.14
IRF9-211ENST00000560852 ZNF853P0CG23 659 aa15.91■□□□□ 0.14
IRF9-211ENST00000560852 CALD1Q05682 793 aaKnown RBP15.91■□□□□ 0.14
IRF9-211ENST00000560852 TEFQ10587 303 aa15.91■□□□□ 0.14
IRF9-211ENST00000560852 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms