RNA–Protein interactions for RNA: ENST00000560761.5

CPNE6-216, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-216ENST00000560761 NBPF4Q96M43 638 aa24.77■■□□□ 1.56
CPNE6-216ENST00000560761 ANKRD36BQ8N2N9 1353 aa24.77■■□□□ 1.56
CPNE6-216ENST00000560761 KAT6BQ8WYB5 2073 aa24.76■■□□□ 1.55
CPNE6-216ENST00000560761 MEGF6O75095 1541 aa24.75■■□□□ 1.55
CPNE6-216ENST00000560761 SLC27A3Q5K4L6 730 aa24.74■■□□□ 1.55
CPNE6-216ENST00000560761 FAM208AQ9UK61 1670 aaKnown RBP24.74■■□□□ 1.55
CPNE6-216ENST00000560761 RGPD2P0DJD1 1756 aa24.74■■□□□ 1.55
CPNE6-216ENST00000560761 NSD2O96028 1365 aa24.73■■□□□ 1.55
CPNE6-216ENST00000560761 SLC24A1O60721 1099 aa24.73■■□□□ 1.55
CPNE6-216ENST00000560761 PNPLA7Q6ZV29 1317 aa24.72■■□□□ 1.55
CPNE6-216ENST00000560761 TMF1P82094 1093 aa24.72■■□□□ 1.55
CPNE6-216ENST00000560761 USP47Q96K76 1375 aa24.71■■□□□ 1.55
CPNE6-216ENST00000560761 HSP90AB2PQ58FF8 381 aa24.7■■□□□ 1.54
CPNE6-216ENST00000560761 TFCP2L1Q9NZI6 479 aa24.7■■□□□ 1.54
CPNE6-216ENST00000560761 KLHL34Q8N239 644 aa24.68■■□□□ 1.54
CPNE6-216ENST00000560761 ZNF784Q8NCA9 323 aaPredicted RBP24.68■■□□□ 1.54
CPNE6-216ENST00000560761 DOT1LQ8TEK3 1739 aa24.67■■□□□ 1.54
CPNE6-216ENST00000560761 SHANK3Q9BYB0 1731 aa24.67■■□□□ 1.54
CPNE6-216ENST00000560761 RTL1A6NKG5 1358 aa24.67■■□□□ 1.54
CPNE6-216ENST00000560761 SLC16A10Q8TF71 515 aa24.66■■□□□ 1.54
CPNE6-216ENST00000560761 CARD14Q9BXL6 1004 aa24.66■■□□□ 1.54
CPNE6-216ENST00000560761 CCNL1Q9UK58 526 aaPredicted RBP24.66■■□□□ 1.54
CPNE6-216ENST00000560761 RAPGEF4Q8WZA2 1011 aa24.65■■□□□ 1.54
CPNE6-216ENST00000560761 MAP3K5Q99683 1374 aa24.64■■□□□ 1.53
CPNE6-216ENST00000560761 GOLGB1Q14789 3259 aaKnown RBP24.63■■□□□ 1.53
CPNE6-216ENST00000560761 TATP17735 454 aaPredicted RBP24.62■■□□□ 1.53
CPNE6-216ENST00000560761 POLD1P28340 1107 aa24.62■■□□□ 1.53
CPNE6-216ENST00000560761 GPR162Q16538 588 aa24.62■■□□□ 1.53
CPNE6-216ENST00000560761 MSH5O43196 834 aa24.61■■□□□ 1.53
CPNE6-216ENST00000560761 COL23A1Q86Y22 540 aaPredicted RBP24.61■■□□□ 1.53
CPNE6-216ENST00000560761 EMILIN1Q9Y6C2 1016 aa24.61■■□□□ 1.53
CPNE6-216ENST00000560761 INSRP06213 1382 aa24.61■■□□□ 1.53
CPNE6-216ENST00000560761 NLGN2Q8NFZ4 835 aa24.6■■□□□ 1.53
CPNE6-216ENST00000560761 LY75O60449 1722 aa24.6■■□□□ 1.53
CPNE6-216ENST00000560761 SMG6Q86US8 1419 aaKnown RBP24.6■■□□□ 1.53
CPNE6-216ENST00000560761 CGNL1Q0VF96 1302 aa24.6■■□□□ 1.53
CPNE6-216ENST00000560761 TUBGCP6Q96RT7 1819 aa24.59■■□□□ 1.53
CPNE6-216ENST00000560761 CYP27B1O15528 508 aa24.58■■□□□ 1.53
CPNE6-216ENST00000560761 PELP1Q8IZL8 1130 aaKnown RBP24.58■■□□□ 1.53
CPNE6-216ENST00000560761 QSER1Q2KHR3 1735 aa24.58■■□□□ 1.52
CPNE6-216ENST00000560761 FLT4P35916 1363 aa24.57■■□□□ 1.52
CPNE6-216ENST00000560761 CDCA8Q53HL2 280 aa24.57■■□□□ 1.52
CPNE6-216ENST00000560761 MPRIPQ6WCQ1 1025 aa24.57■■□□□ 1.52
CPNE6-216ENST00000560761 PPM1GO15355 546 aaPredicted RBP24.56■■□□□ 1.52
CPNE6-216ENST00000560761 MSL1Q68DK7 614 aa24.56■■□□□ 1.52
CPNE6-216ENST00000560761 NSD3Q9BZ95 1437 aa24.55■■□□□ 1.52
CPNE6-216ENST00000560761 PCDH11XQ9BZA7 1347 aa24.55■■□□□ 1.52
CPNE6-216ENST00000560761 PCDH11YQ9BZA8 1340 aa24.55■■□□□ 1.52
CPNE6-216ENST00000560761 COL24A1Q17RW2 1714 aa24.54■■□□□ 1.52
CPNE6-216ENST00000560761 KIF20BQ96Q89 1820 aa24.54■■□□□ 1.52
CPNE6-216ENST00000560761 SMIM5Q71RC9 77 aa24.52■■□□□ 1.52
CPNE6-216ENST00000560761 KIF24Q5T7B8 1368 aa24.52■■□□□ 1.52
CPNE6-216ENST00000560761 PALLDQ8WX93 1383 aa24.52■■□□□ 1.52
CPNE6-216ENST00000560761 AMIGO3Q86WK7 504 aa24.5■■□□□ 1.51
CPNE6-216ENST00000560761 YBX3P16989 372 aaKnown RBP eCLIP24.49■■□□□ 1.51
CPNE6-216ENST00000560761 PIGBQ92521 554 aa24.49■■□□□ 1.51
CPNE6-216ENST00000560761 EYA1Q99502 592 aa24.48■■□□□ 1.51
CPNE6-216ENST00000560761 POLR3GLQ9BT43 218 aa24.48■■□□□ 1.51
CPNE6-216ENST00000560761 CHD4Q14839 1912 aa24.47■■□□□ 1.51
CPNE6-216ENST00000560761 WASHC2AQ641Q2 1341 aa24.46■■□□□ 1.51
CPNE6-216ENST00000560761 POLKQ9UBT6 870 aa24.46■■□□□ 1.51
CPNE6-216ENST00000560761 TOGARAM1Q9Y4F4 1720 aa24.46■■□□□ 1.51
CPNE6-216ENST00000560761 NKX1-1Q15270 411 aaPredicted RBP24.45■■□□□ 1.5
CPNE6-216ENST00000560761 C5P01031 1676 aa24.44■■□□□ 1.5
CPNE6-216ENST00000560761 TNNT2P45379 298 aaPredicted RBP24.44■■□□□ 1.5
CPNE6-216ENST00000560761 SPG7Q9UQ90 795 aa24.44■■□□□ 1.5
CPNE6-216ENST00000560761 NCAPD2Q15021 1401 aa24.44■■□□□ 1.5
CPNE6-216ENST00000560761 C1QTNF8P60827 252 aa24.43■■□□□ 1.5
CPNE6-216ENST00000560761 SMARCC1Q92922 1105 aaPredicted RBP24.43■■□□□ 1.5
CPNE6-216ENST00000560761 PHF14O94880 888 aa24.42■■□□□ 1.5
CPNE6-216ENST00000560761 FLAD1Q8NFF5 587 aa24.41■■□□□ 1.5
CPNE6-216ENST00000560761 AK7Q96M32 723 aa24.41■■□□□ 1.5
CPNE6-216ENST00000560761 EIF4G2P78344 907 aaKnown RBP eCLIP24.4■■□□□ 1.5
CPNE6-216ENST00000560761 LINC00116Q8NCU8 138 aa24.4■■□□□ 1.5
CPNE6-216ENST00000560761 ASAP1Q9ULH1 1129 aa24.4■■□□□ 1.5
CPNE6-216ENST00000560761 PKD1L3Q7Z443 1732 aa24.4■■□□□ 1.5
CPNE6-216ENST00000560761 ITGB4P16144 1822 aa24.4■■□□□ 1.5
CPNE6-216ENST00000560761 ZEB1P37275 1124 aaPredicted RBP24.39■■□□□ 1.49
CPNE6-216ENST00000560761 EIF4A2Q14240 407 aaKnown RBP24.39■■□□□ 1.49
CPNE6-216ENST00000560761 TAF1LQ8IZX4 1826 aa24.39■■□□□ 1.49
CPNE6-216ENST00000560761 C4BP0C0L5 1744 aa24.38■■□□□ 1.49
CPNE6-216ENST00000560761 SENP3-EIF4A1A0A087X0R7 540 aa24.38■■□□□ 1.49
CPNE6-216ENST00000560761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.38■■□□□ 1.49
CPNE6-216ENST00000560761 LOC102724428A0A0B4J2F2 783 aa24.38■■□□□ 1.49
CPNE6-216ENST00000560761 PHKG2P15735 406 aa24.38■■□□□ 1.49
CPNE6-216ENST00000560761 SIK1P57059 783 aa24.38■■□□□ 1.49
CPNE6-216ENST00000560761 GRIN3BO60391 1043 aa24.37■■□□□ 1.49
CPNE6-216ENST00000560761 ITPK1Q13572 414 aa24.37■■□□□ 1.49
CPNE6-216ENST00000560761 TMOD3Q9NYL9 352 aa24.37■■□□□ 1.49
CPNE6-216ENST00000560761 CD2APQ9Y5K6 639 aa24.37■■□□□ 1.49
CPNE6-216ENST00000560761 ANKRD26Q9UPS8 1709 aa24.36■■□□□ 1.49
CPNE6-216ENST00000560761 IFNL2Q8IZJ0 200 aa24.36■■□□□ 1.49
CPNE6-216ENST00000560761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.36■■□□□ 1.49
CPNE6-216ENST00000560761 MAP2P11137 1827 aaKnown RBP24.35■■□□□ 1.49
CPNE6-216ENST00000560761 WWC3Q9ULE0 1092 aa24.35■■□□□ 1.49
CPNE6-216ENST00000560761 ATG3Q9NT62 314 aa24.34■■□□□ 1.49
CPNE6-216ENST00000560761 GIGYF1O75420 1035 aaPredicted RBP24.33■■□□□ 1.49
CPNE6-216ENST00000560761 HMGB2P26583 209 aaKnown RBP24.33■■□□□ 1.49
CPNE6-216ENST00000560761 ATP6V1AP38606 617 aa24.33■■□□□ 1.49
CPNE6-216ENST00000560761 PANK3Q9H999 370 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms