RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 C5P01031 1676 aa14.25□□□□□ -0.13
TPM1-225ENST00000560679 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
TPM1-225ENST00000560679 GRIN3BO60391 1043 aa14.23□□□□□ -0.13
TPM1-225ENST00000560679 PRIM1P49642 420 aaKnown RBP14.23□□□□□ -0.13
TPM1-225ENST00000560679 COL23A1Q86Y22 540 aaPredicted RBP14.23□□□□□ -0.13
TPM1-225ENST00000560679 TOGARAM1Q9Y4F4 1720 aa14.23□□□□□ -0.13
TPM1-225ENST00000560679 A0A1W2PP64 1363 aa14.22□□□□□ -0.13
TPM1-225ENST00000560679 MSL1Q68DK7 614 aa14.22□□□□□ -0.13
TPM1-225ENST00000560679 SYTL4Q96C24 671 aaPredicted RBP14.22□□□□□ -0.13
TPM1-225ENST00000560679 TAF1LQ8IZX4 1826 aa14.21□□□□□ -0.13
TPM1-225ENST00000560679 IP6K1Q92551 441 aa14.21□□□□□ -0.13
TPM1-225ENST00000560679 CCNL1Q9UK58 526 aaPredicted RBP14.21□□□□□ -0.13
TPM1-225ENST00000560679 HSPA6P17066 643 aa14.2□□□□□ -0.14
TPM1-225ENST00000560679 LTV1Q96GA3 475 aaPredicted RBP14.19□□□□□ -0.14
TPM1-225ENST00000560679 MSH5O43196 834 aa14.18□□□□□ -0.14
TPM1-225ENST00000560679 SLC12A5Q9H2X9 1139 aa14.18□□□□□ -0.14
TPM1-225ENST00000560679 GPBP1L1Q9HC44 474 aaPredicted RBP14.18□□□□□ -0.14
TPM1-225ENST00000560679 MAP3K19Q56UN5 1328 aa14.17□□□□□ -0.14
TPM1-225ENST00000560679 CICQ96RK0 1608 aaPredicted RBP14.17□□□□□ -0.14
TPM1-225ENST00000560679 CD2APQ9Y5K6 639 aa14.17□□□□□ -0.14
TPM1-225ENST00000560679 C4BP0C0L5 1744 aa14.17□□□□□ -0.14
TPM1-225ENST00000560679 USP47Q96K76 1375 aa14.17□□□□□ -0.14
TPM1-225ENST00000560679 HOXC9P31274 260 aa14.16□□□□□ -0.14
TPM1-225ENST00000560679 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
TPM1-225ENST00000560679 TMC1Q8TDI8 760 aa14.16□□□□□ -0.14
TPM1-225ENST00000560679 ZNF526Q8TF50 670 aaPredicted RBP14.16□□□□□ -0.14
TPM1-225ENST00000560679 SIN3AQ96ST3 1273 aa14.16□□□□□ -0.14
TPM1-225ENST00000560679 UBR3Q6ZT12 1888 aa14.16□□□□□ -0.14
TPM1-225ENST00000560679 FBLN1P23142 703 aa14.15□□□□□ -0.14
TPM1-225ENST00000560679 AMIGO3Q86WK7 504 aa14.15□□□□□ -0.14
TPM1-225ENST00000560679 ZCRB1Q8TBF4 217 aaKnown RBP14.15□□□□□ -0.14
TPM1-225ENST00000560679 KIAA1551Q9HCM1 1747 aa14.13□□□□□ -0.15
TPM1-225ENST00000560679 RTL1A6NKG5 1358 aa14.13□□□□□ -0.15
TPM1-225ENST00000560679 PALLDQ8WX93 1383 aa14.13□□□□□ -0.15
TPM1-225ENST00000560679 IGSF1Q8N6C5 1336 aa14.13□□□□□ -0.15
TPM1-225ENST00000560679 KIF3CO14782 793 aa14.12□□□□□ -0.15
TPM1-225ENST00000560679 USHBP1Q8N6Y0 703 aa14.12□□□□□ -0.15
TPM1-225ENST00000560679 TERF2IPQ9NYB0 399 aa14.12□□□□□ -0.15
TPM1-225ENST00000560679 WWC3Q9ULE0 1092 aa14.12□□□□□ -0.15
TPM1-225ENST00000560679 MAP2P11137 1827 aaKnown RBP14.12□□□□□ -0.15
TPM1-225ENST00000560679 ITGB4P16144 1822 aa14.12□□□□□ -0.15
TPM1-225ENST00000560679 NBPF6Q5VWK0 638 aa14.11□□□□□ -0.15
TPM1-225ENST00000560679 NBPF4Q96M43 638 aa14.11□□□□□ -0.15
TPM1-225ENST00000560679 PKD1L3Q7Z443 1732 aa14.1□□□□□ -0.15
TPM1-225ENST00000560679 SMIM5Q71RC9 77 aa14.1□□□□□ -0.15
TPM1-225ENST00000560679 KIF13BQ9NQT8 1826 aa14.09□□□□□ -0.15
TPM1-225ENST00000560679 AMPHP49418 695 aa14.09□□□□□ -0.15
TPM1-225ENST00000560679 FLAD1Q8NFF5 587 aa14.09□□□□□ -0.15
TPM1-225ENST00000560679 CGNL1Q0VF96 1302 aa14.09□□□□□ -0.15
TPM1-225ENST00000560679 NEUROD1Q13562 356 aa14.08□□□□□ -0.16
TPM1-225ENST00000560679 RRS1Q15050 365 aaKnown RBP14.08□□□□□ -0.16
TPM1-225ENST00000560679 COG3Q96JB2 828 aa14.08□□□□□ -0.16
TPM1-225ENST00000560679 CARD11Q9BXL7 1154 aa14.08□□□□□ -0.16
TPM1-225ENST00000560679 PUS7Q96PZ0 661 aaKnown RBP14.07□□□□□ -0.16
TPM1-225ENST00000560679 PCDH11XQ9BZA7 1347 aa14.07□□□□□ -0.16
TPM1-225ENST00000560679 PCDH11YQ9BZA8 1340 aa14.07□□□□□ -0.16
TPM1-225ENST00000560679 PXDNLA1KZ92 1463 aa14.06□□□□□ -0.16
TPM1-225ENST00000560679 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.06□□□□□ -0.16
TPM1-225ENST00000560679 CYP27B1O15528 508 aa14.06□□□□□ -0.16
TPM1-225ENST00000560679 PHF14O94880 888 aa14.06□□□□□ -0.16
TPM1-225ENST00000560679 AK7Q96M32 723 aa14.06□□□□□ -0.16
TPM1-225ENST00000560679 WDR90Q96KV7 1748 aa14.06□□□□□ -0.16
TPM1-225ENST00000560679 SMG6Q86US8 1419 aaKnown RBP14.06□□□□□ -0.16
TPM1-225ENST00000560679 NSD3Q9BZ95 1437 aa14.06□□□□□ -0.16
TPM1-225ENST00000560679 N4BP2Q86UW6 1770 aaPredicted RBP14.05□□□□□ -0.16
TPM1-225ENST00000560679 MPRIPQ6WCQ1 1025 aa14.05□□□□□ -0.16
TPM1-225ENST00000560679 DNAJC5GQ8N7S2 189 aa14.05□□□□□ -0.16
TPM1-225ENST00000560679 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
TPM1-225ENST00000560679 NCAPD2Q15021 1401 aa14.05□□□□□ -0.16
TPM1-225ENST00000560679 KIF20BQ96Q89 1820 aa14.04□□□□□ -0.16
TPM1-225ENST00000560679 TATP17735 454 aaPredicted RBP14.04□□□□□ -0.16
TPM1-225ENST00000560679 APLP1P51693 650 aa14.04□□□□□ -0.16
TPM1-225ENST00000560679 LINC00116Q8NCU8 138 aa14.04□□□□□ -0.16
TPM1-225ENST00000560679 TESK2Q96S53 571 aa14.04□□□□□ -0.16
TPM1-225ENST00000560679 BRCA1P38398 1863 aaKnown RBP14.04□□□□□ -0.16
TPM1-225ENST00000560679 SSFA2P28290 1259 aa14.03□□□□□ -0.16
TPM1-225ENST00000560679 INSRP06213 1382 aa14.03□□□□□ -0.16
TPM1-225ENST00000560679 PCNTO95613 3336 aa14.03□□□□□ -0.16
TPM1-225ENST00000560679 C10orf71Q711Q0 1435 aa14.02□□□□□ -0.16
TPM1-225ENST00000560679 PIGBQ92521 554 aa14.02□□□□□ -0.17
TPM1-225ENST00000560679 ANKRD26Q9UPS8 1709 aa14.01□□□□□ -0.17
TPM1-225ENST00000560679 FLT4P35916 1363 aa14.01□□□□□ -0.17
TPM1-225ENST00000560679 HSP90AB2PQ58FF8 381 aa14.01□□□□□ -0.17
TPM1-225ENST00000560679 SMARCC1Q92922 1105 aaPredicted RBP14.01□□□□□ -0.17
TPM1-225ENST00000560679 GGNBP2Q9H3C7 697 aa14.01□□□□□ -0.17
TPM1-225ENST00000560679 FYB1O15117 783 aa14□□□□□ -0.17
TPM1-225ENST00000560679 TOMM70O94826 608 aa14□□□□□ -0.17
TPM1-225ENST00000560679 ITPK1Q13572 414 aa14□□□□□ -0.17
TPM1-225ENST00000560679 LOC102724428A0A0B4J2F2 783 aa13.99□□□□□ -0.17
TPM1-225ENST00000560679 HMGB2P26583 209 aaKnown RBP13.99□□□□□ -0.17
TPM1-225ENST00000560679 SIK1P57059 783 aa13.99□□□□□ -0.17
TPM1-225ENST00000560679 NMRK2Q9NPI5 230 aa13.99□□□□□ -0.17
TPM1-225ENST00000560679 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
TPM1-225ENST00000560679 KIF24Q5T7B8 1368 aa13.98□□□□□ -0.17
TPM1-225ENST00000560679 GNPATO15228 680 aa13.98□□□□□ -0.17
TPM1-225ENST00000560679 MMP10P09238 476 aa13.98□□□□□ -0.17
TPM1-225ENST00000560679 NKX1-1Q15270 411 aaPredicted RBP13.98□□□□□ -0.17
TPM1-225ENST00000560679 COL5A3P25940 1745 aaPredicted RBP13.98□□□□□ -0.17
TPM1-225ENST00000560679 KDRP35968 1356 aa13.97□□□□□ -0.17
TPM1-225ENST00000560679 ARFGEF1Q9Y6D6 1849 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms