RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 SLC16A10Q8TF71 515 aa25.69■■□□□ 1.7
TPM1-224ENST00000560615 INSRP06213 1382 aa25.69■■□□□ 1.7
TPM1-224ENST00000560615 FLT4P35916 1363 aa25.69■■□□□ 1.7
TPM1-224ENST00000560615 LRRC4BQ9NT99 713 aa25.68■■□□□ 1.7
TPM1-224ENST00000560615 BTAF1O14981 1849 aa25.66■■□□□ 1.7
TPM1-224ENST00000560615 ARXQ96QS3 562 aa25.66■■□□□ 1.7
TPM1-224ENST00000560615 PCGF6Q9BYE7 350 aa25.66■■□□□ 1.7
TPM1-224ENST00000560615 ZNF827Q17R98 1081 aa25.65■■□□□ 1.7
TPM1-224ENST00000560615 HSP90AB2PQ58FF8 381 aa25.65■■□□□ 1.7
TPM1-224ENST00000560615 SYT17Q9BSW7 474 aa25.65■■□□□ 1.7
TPM1-224ENST00000560615 FHDC1Q9C0D6 1143 aaPredicted RBP25.65■■□□□ 1.7
TPM1-224ENST00000560615 TFCP2L1Q9NZI6 479 aa25.65■■□□□ 1.7
TPM1-224ENST00000560615 USHBP1Q8N6Y0 703 aa25.64■■□□□ 1.7
TPM1-224ENST00000560615 AKT1S1Q96B36 256 aa25.64■■□□□ 1.7
TPM1-224ENST00000560615 PCDH11XQ9BZA7 1347 aa25.63■■□□□ 1.69
TPM1-224ENST00000560615 PCDH11YQ9BZA8 1340 aa25.63■■□□□ 1.69
TPM1-224ENST00000560615 MEGF6O75095 1541 aa25.63■■□□□ 1.69
TPM1-224ENST00000560615 POLD1P28340 1107 aa25.63■■□□□ 1.69
TPM1-224ENST00000560615 SGIP1Q9BQI5 828 aa25.62■■□□□ 1.69
TPM1-224ENST00000560615 CARD14Q9BXL6 1004 aa25.62■■□□□ 1.69
TPM1-224ENST00000560615 KAT6BQ8WYB5 2073 aa25.62■■□□□ 1.69
TPM1-224ENST00000560615 NSD3Q9BZ95 1437 aa25.62■■□□□ 1.69
TPM1-224ENST00000560615 CCNL1Q9UK58 526 aaPredicted RBP25.61■■□□□ 1.69
TPM1-224ENST00000560615 PAPPAQ13219 1627 aa25.61■■□□□ 1.69
TPM1-224ENST00000560615 PPM1GO15355 546 aaPredicted RBP25.6■■□□□ 1.69
TPM1-224ENST00000560615 MYOM1P52179 1685 aa25.58■■□□□ 1.68
TPM1-224ENST00000560615 POLR3GLQ9BT43 218 aa25.57■■□□□ 1.68
TPM1-224ENST00000560615 EMILIN1Q9Y6C2 1016 aa25.57■■□□□ 1.68
TPM1-224ENST00000560615 PNPLA7Q6ZV29 1317 aa25.56■■□□□ 1.68
TPM1-224ENST00000560615 NSD2O96028 1365 aa25.56■■□□□ 1.68
TPM1-224ENST00000560615 MAP3K5Q99683 1374 aa25.56■■□□□ 1.68
TPM1-224ENST00000560615 SPG7Q9UQ90 795 aa25.55■■□□□ 1.68
TPM1-224ENST00000560615 KIF20BQ96Q89 1820 aa25.55■■□□□ 1.68
TPM1-224ENST00000560615 KCNQ4P56696 695 aa25.54■■□□□ 1.68
TPM1-224ENST00000560615 EIF4G2P78344 907 aaKnown RBP eCLIP25.54■■□□□ 1.68
TPM1-224ENST00000560615 WASHC2AQ641Q2 1341 aa25.54■■□□□ 1.68
TPM1-224ENST00000560615 MSH5O43196 834 aa25.53■■□□□ 1.68
TPM1-224ENST00000560615 SMARCC1Q92922 1105 aaPredicted RBP25.53■■□□□ 1.68
TPM1-224ENST00000560615 DOT1LQ8TEK3 1739 aa25.53■■□□□ 1.68
TPM1-224ENST00000560615 MPRIPQ6WCQ1 1025 aa25.52■■□□□ 1.68
TPM1-224ENST00000560615 RGPD2P0DJD1 1756 aa25.51■■□□□ 1.67
TPM1-224ENST00000560615 KLHL34Q8N239 644 aa25.51■■□□□ 1.67
TPM1-224ENST00000560615 FLAD1Q8NFF5 587 aa25.51■■□□□ 1.67
TPM1-224ENST00000560615 GPR162Q16538 588 aa25.49■■□□□ 1.67
TPM1-224ENST00000560615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.49■■□□□ 1.676e-8■■■□□ 19.1
TPM1-224ENST00000560615 PALLDQ8WX93 1383 aa25.48■■□□□ 1.67
TPM1-224ENST00000560615 CYP27B1O15528 508 aa25.48■■□□□ 1.67
TPM1-224ENST00000560615 SHANK3Q9BYB0 1731 aa25.46■■□□□ 1.67
TPM1-224ENST00000560615 CCER1Q8TC90 406 aaPredicted RBP25.46■■□□□ 1.67
TPM1-224ENST00000560615 POLKQ9UBT6 870 aa25.46■■□□□ 1.67
TPM1-224ENST00000560615 QSER1Q2KHR3 1735 aa25.46■■□□□ 1.67
TPM1-224ENST00000560615 NKX1-1Q15270 411 aaPredicted RBP25.45■■□□□ 1.66
TPM1-224ENST00000560615 EYA1Q99502 592 aa25.45■■□□□ 1.66
TPM1-224ENST00000560615 LY75O60449 1722 aa25.45■■□□□ 1.66
TPM1-224ENST00000560615 COL23A1Q86Y22 540 aaPredicted RBP25.44■■□□□ 1.66
TPM1-224ENST00000560615 IFNL2Q8IZJ0 200 aa25.43■■□□□ 1.66
TPM1-224ENST00000560615 HSPA5P11021 654 aaKnown RBP25.42■■□□□ 1.66
TPM1-224ENST00000560615 TNNT2P45379 298 aaPredicted RBP25.42■■□□□ 1.66
TPM1-224ENST00000560615 AK7Q96M32 723 aa25.42■■□□□ 1.66
TPM1-224ENST00000560615 NCAPD2Q15021 1401 aa25.42■■□□□ 1.66
TPM1-224ENST00000560615 TMOD3Q9NYL9 352 aa25.41■■□□□ 1.66
TPM1-224ENST00000560615 PELP1Q8IZL8 1130 aaKnown RBP25.4■■□□□ 1.66
TPM1-224ENST00000560615 PIGBQ92521 554 aa25.4■■□□□ 1.66
TPM1-224ENST00000560615 PANK3Q9H999 370 aa25.4■■□□□ 1.66
TPM1-224ENST00000560615 PLEKHG2Q9H7P9 1386 aa25.4■■□□□ 1.66
TPM1-224ENST00000560615 EIF4A2Q14240 407 aaKnown RBP25.38■■□□□ 1.65
TPM1-224ENST00000560615 ZNF784Q8NCA9 323 aaPredicted RBP25.38■■□□□ 1.65
TPM1-224ENST00000560615 PHKG2P15735 406 aa25.37■■□□□ 1.65
TPM1-224ENST00000560615 HSP90AB1P08238 724 aaKnown RBP25.36■■□□□ 1.65
TPM1-224ENST00000560615 GRIN3BO60391 1043 aa25.35■■□□□ 1.65
TPM1-224ENST00000560615 PKD1L3Q7Z443 1732 aa25.34■■□□□ 1.65
TPM1-224ENST00000560615 ANKRD26Q9UPS8 1709 aa25.34■■□□□ 1.65
TPM1-224ENST00000560615 LOC102724428A0A0B4J2F2 783 aa25.34■■□□□ 1.65
TPM1-224ENST00000560615 SIK1P57059 783 aa25.34■■□□□ 1.65
TPM1-224ENST00000560615 MSL1Q68DK7 614 aa25.34■■□□□ 1.65
TPM1-224ENST00000560615 MORC1Q86VD1 984 aa25.34■■□□□ 1.65
TPM1-224ENST00000560615 KNSTRNQ9Y448 316 aa25.34■■□□□ 1.65
TPM1-224ENST00000560615 PLEKHO1Q53GL0 409 aaPredicted RBP25.33■■□□□ 1.65
TPM1-224ENST00000560615 AMOTQ4VCS5 1084 aa25.32■■□□□ 1.64
TPM1-224ENST00000560615 NLGN2Q8NFZ4 835 aa25.32■■□□□ 1.64
TPM1-224ENST00000560615 CD2APQ9Y5K6 639 aa25.32■■□□□ 1.64
TPM1-224ENST00000560615 COL24A1Q17RW2 1714 aa25.32■■□□□ 1.64
TPM1-224ENST00000560615 MAP2P11137 1827 aaKnown RBP25.31■■□□□ 1.64
TPM1-224ENST00000560615 SSFA2P28290 1259 aa25.31■■□□□ 1.64
TPM1-224ENST00000560615 C5P01031 1676 aa25.31■■□□□ 1.64
TPM1-224ENST00000560615 IGSF1Q8N6C5 1336 aa25.31■■□□□ 1.64
TPM1-224ENST00000560615 ERVV-2B6SEH9 535 aa25.3■■□□□ 1.64
TPM1-224ENST00000560615 PHF14O94880 888 aa25.3■■□□□ 1.64
TPM1-224ENST00000560615 ATP6V1AP38606 617 aa25.3■■□□□ 1.64
TPM1-224ENST00000560615 TUBGCP6Q96RT7 1819 aa25.29■■□□□ 1.64
TPM1-224ENST00000560615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.29■■□□□ 1.64
TPM1-224ENST00000560615 DCAF5Q96JK2 942 aa25.29■■□□□ 1.64
TPM1-224ENST00000560615 ASAP1Q9ULH1 1129 aa25.28■■□□□ 1.64
TPM1-224ENST00000560615 C4BP0C0L5 1744 aa25.26■■□□□ 1.63
TPM1-224ENST00000560615 TOGARAM1Q9Y4F4 1720 aa25.26■■□□□ 1.63
TPM1-224ENST00000560615 GNPATO15228 680 aa25.25■■□□□ 1.63
TPM1-224ENST00000560615 C1orf141Q5JVX7 400 aa25.25■■□□□ 1.63
TPM1-224ENST00000560615 LINC00116Q8NCU8 138 aa25.25■■□□□ 1.63
TPM1-224ENST00000560615 ATG3Q9NT62 314 aa25.25■■□□□ 1.63
TPM1-224ENST00000560615 ITGB4P16144 1822 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms