RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 MST1RQ04912 1400 aa24.27■■□□□ 1.48
HMBOX1-215ENST00000560599 MTHFSDQ2M296 383 aaKnown RBP24.27■■□□□ 1.48
HMBOX1-215ENST00000560599 MCM10Q7L590 875 aa24.27■■□□□ 1.48
HMBOX1-215ENST00000560599 C8orf58Q8NAV2 365 aa24.27■■□□□ 1.48
HMBOX1-215ENST00000560599 ANP32EQ9BTT0 268 aa24.27■■□□□ 1.48
HMBOX1-215ENST00000560599 ABCC4O15439 1325 aa24.26■■□□□ 1.47
HMBOX1-215ENST00000560599 IPO9Q96P70 1041 aaKnown RBP24.26■■□□□ 1.47
HMBOX1-215ENST00000560599 C19orf44Q9H6X5 657 aa24.24■■□□□ 1.47
HMBOX1-215ENST00000560599 ZBTB40Q9NUA8 1239 aa24.24■■□□□ 1.47
HMBOX1-215ENST00000560599 MAP3K5Q99683 1374 aa24.23■■□□□ 1.47
HMBOX1-215ENST00000560599 USP19O94966 1318 aa24.23■■□□□ 1.47
HMBOX1-215ENST00000560599 C8orf34Q49A92 452 aa24.22■■□□□ 1.47
HMBOX1-215ENST00000560599 NOP58Q9Y2X3 529 aaKnown RBP24.22■■□□□ 1.47
HMBOX1-215ENST00000560599 ALS2Q96Q42 1657 aa24.21■■□□□ 1.47
HMBOX1-215ENST00000560599 CAMTA1Q9Y6Y1 1673 aa24.21■■□□□ 1.47
HMBOX1-215ENST00000560599 ORAI2Q96SN7 254 aa24.2■■□□□ 1.46
HMBOX1-215ENST00000560599 PDZRN3Q9UPQ7 1066 aa24.2■■□□□ 1.46
HMBOX1-215ENST00000560599 ELL2O00472 640 aaPredicted RBP24.19■■□□□ 1.46
HMBOX1-215ENST00000560599 MSH6P52701 1360 aa24.19■■□□□ 1.46
HMBOX1-215ENST00000560599 STRCP1A6NGW2 1772 aa24.19■■□□□ 1.46
HMBOX1-215ENST00000560599 GNAT3A8MTJ3 354 aa24.18■■□□□ 1.46
HMBOX1-215ENST00000560599 NCAPD2Q15021 1401 aa24.18■■□□□ 1.46
HMBOX1-215ENST00000560599 NPM2Q86SE8 214 aaKnown RBP24.18■■□□□ 1.46
HMBOX1-215ENST00000560599 LTV1Q96GA3 475 aaPredicted RBP24.18■■□□□ 1.46
HMBOX1-215ENST00000560599 BABAM1Q9NWV8 329 aa24.18■■□□□ 1.46
HMBOX1-215ENST00000560599 TSPYL4Q9UJ04 414 aa24.18■■□□□ 1.46
HMBOX1-215ENST00000560599 TMEM94Q12767 1356 aa24.18■■□□□ 1.46
HMBOX1-215ENST00000560599 SOS1Q07889 1333 aaPredicted RBP24.18■■□□□ 1.46
HMBOX1-215ENST00000560599 FOXO3O43524 673 aa24.18■■□□□ 1.46
HMBOX1-215ENST00000560599 DDRGK1Q96HY6 314 aa24.18■■□□□ 1.46
HMBOX1-215ENST00000560599 PTPRCP08575 1304 aa24.17■■□□□ 1.46
HMBOX1-215ENST00000560599 ATF3P18847 181 aa24.17■■□□□ 1.46
HMBOX1-215ENST00000560599 KRT28Q7Z3Y7 464 aa24.16■■□□□ 1.46
HMBOX1-215ENST00000560599 LMO7Q8WWI1 1683 aa24.15■■□□□ 1.46
HMBOX1-215ENST00000560599 FAM208AQ9UK61 1670 aaKnown RBP24.15■■□□□ 1.46
HMBOX1-215ENST00000560599 SMC5Q8IY18 1101 aa24.15■■□□□ 1.46
HMBOX1-215ENST00000560599 MED1Q15648 1581 aaPredicted RBP24.15■■□□□ 1.46
HMBOX1-215ENST00000560599 ZBTB7BO15156 539 aaPredicted RBP24.13■■□□□ 1.45
HMBOX1-215ENST00000560599 GCP02774 474 aa24.13■■□□□ 1.45
HMBOX1-215ENST00000560599 ARHGEF25Q86VW2 580 aa24.13■■□□□ 1.45
HMBOX1-215ENST00000560599 ZBTB47Q9UFB7 747 aaPredicted RBP24.13■■□□□ 1.45
HMBOX1-215ENST00000560599 RGS12O14924 1447 aa24.13■■□□□ 1.45
HMBOX1-215ENST00000560599 MYT1Q01538 1121 aa24.12■■□□□ 1.45
HMBOX1-215ENST00000560599 ABCC6O95255 1503 aa24.12■■□□□ 1.45
HMBOX1-215ENST00000560599 LMTK3Q96Q04 1460 aa24.11■■□□□ 1.45
HMBOX1-215ENST00000560599 OVOS2A0A0G2JMS6 1433 aa24.1■■□□□ 1.45
HMBOX1-215ENST00000560599 ZBTB7CA1YPR0 619 aa24.1■■□□□ 1.45
HMBOX1-215ENST00000560599 XPCQ01831 940 aaPredicted RBP24.1■■□□□ 1.45
HMBOX1-215ENST00000560599 KRT24Q2M2I5 525 aa24.1■■□□□ 1.45
HMBOX1-215ENST00000560599 INTS3Q68E01 1043 aaKnown RBP24.1■■□□□ 1.45
HMBOX1-215ENST00000560599 CADPS2Q86UW7 1296 aa24.1■■□□□ 1.45
HMBOX1-215ENST00000560599 USHBP1Q8N6Y0 703 aa24.09■■□□□ 1.45
HMBOX1-215ENST00000560599 RGPD2P0DJD1 1756 aa24.08■■□□□ 1.45
HMBOX1-215ENST00000560599 CEMIPQ8WUJ3 1361 aa24.07■■□□□ 1.44
HMBOX1-215ENST00000560599 NBPF6Q5VWK0 638 aa24.07■■□□□ 1.44
HMBOX1-215ENST00000560599 LMOD2Q6P5Q4 547 aa24.07■■□□□ 1.44
HMBOX1-215ENST00000560599 GCC1Q96CN9 775 aa24.07■■□□□ 1.44
HMBOX1-215ENST00000560599 NBPF4Q96M43 638 aa24.07■■□□□ 1.44
HMBOX1-215ENST00000560599 TNS3Q68CZ2 1445 aa24.06■■□□□ 1.44
HMBOX1-215ENST00000560599 TAF7Q15545 349 aaPredicted RBP24.06■■□□□ 1.44
HMBOX1-215ENST00000560599 KDM3BQ7LBC6 1761 aa24.06■■□□□ 1.44
HMBOX1-215ENST00000560599 NPHP3Q7Z494 1330 aa24.06■■□□□ 1.44
HMBOX1-215ENST00000560599 AMOTQ4VCS5 1084 aa24.05■■□□□ 1.44
HMBOX1-215ENST00000560599 PLEKHO1Q53GL0 409 aaPredicted RBP24.05■■□□□ 1.44
HMBOX1-215ENST00000560599 NUCB1Q02818 461 aa24.04■■□□□ 1.44
HMBOX1-215ENST00000560599 IL17REQ8NFR9 667 aa24.04■■□□□ 1.44
HMBOX1-215ENST00000560599 ANKRD24Q8TF21 1146 aa24.04■■□□□ 1.44
HMBOX1-215ENST00000560599 STK31Q9BXU1 1019 aa24.04■■□□□ 1.44
HMBOX1-215ENST00000560599 N4BP2Q86UW6 1770 aaPredicted RBP24.04■■□□□ 1.44
HMBOX1-215ENST00000560599 MIS18AQ9NYP9 233 aa24.03■■□□□ 1.44
HMBOX1-215ENST00000560599 AKAP4Q5JQC9 854 aa24.02■■□□□ 1.44
HMBOX1-215ENST00000560599 CCDC30Q5VVM6 783 aa24.02■■□□□ 1.44
HMBOX1-215ENST00000560599 PXDNQ92626 1479 aa24.02■■□□□ 1.44
HMBOX1-215ENST00000560599 PLEKHG2Q9H7P9 1386 aa24.02■■□□□ 1.44
HMBOX1-215ENST00000560599 XIRP1Q702N8 1843 aaKnown RBP24.02■■□□□ 1.44
HMBOX1-215ENST00000560599 CRYBG1Q9Y4K1 1723 aa24.01■■□□□ 1.43
HMBOX1-215ENST00000560599 PXDNLA1KZ92 1463 aa24.01■■□□□ 1.43
HMBOX1-215ENST00000560599 SLC4A2P04920 1241 aa24.01■■□□□ 1.43
HMBOX1-215ENST00000560599 ZNF530Q6P9A1 599 aaPredicted RBP24.01■■□□□ 1.43
HMBOX1-215ENST00000560599 CHMP4AQ9BY43 222 aa24.01■■□□□ 1.43
HMBOX1-215ENST00000560599 CCT4P50991 539 aaKnown RBP24■■□□□ 1.43
HMBOX1-215ENST00000560599 STRCQ7RTU9 1775 aa23.99■■□□□ 1.43
HMBOX1-215ENST00000560599 CACNA1FO60840 1977 aa23.99■■□□□ 1.43
HMBOX1-215ENST00000560599 LRRC59Q96AG4 307 aaKnown RBP23.99■■□□□ 1.43
HMBOX1-215ENST00000560599 C1orf115Q9H7X2 142 aa23.99■■□□□ 1.43
HMBOX1-215ENST00000560599 UPF2Q9HAU5 1272 aaKnown RBP23.99■■□□□ 1.43
HMBOX1-215ENST00000560599 ATP10DQ9P241 1426 aa23.98■■□□□ 1.43
HMBOX1-215ENST00000560599 ADAMTS7Q9UKP4 1686 aa23.98■■□□□ 1.43
HMBOX1-215ENST00000560599 HSPA2P54652 639 aa23.98■■□□□ 1.43
HMBOX1-215ENST00000560599 CHD1LQ86WJ1 897 aa23.98■■□□□ 1.43
HMBOX1-215ENST00000560599 HOXB7P09629 217 aa23.97■■□□□ 1.43
HMBOX1-215ENST00000560599 C1orf141Q5JVX7 400 aa23.97■■□□□ 1.43
HMBOX1-215ENST00000560599 ERBB3P21860 1342 aa23.96■■□□□ 1.43
HMBOX1-215ENST00000560599 COL18A1P39060 1754 aa23.96■■□□□ 1.43
HMBOX1-215ENST00000560599 RGPD5Q99666 1765 aa23.95■■□□□ 1.43
HMBOX1-215ENST00000560599 ANKRD44Q8N8A2 993 aa23.95■■□□□ 1.42
HMBOX1-215ENST00000560599 RPAP2Q8IXW5 612 aaPredicted RBP23.94■■□□□ 1.42
HMBOX1-215ENST00000560599 TEFQ10587 303 aa23.93■■□□□ 1.42
HMBOX1-215ENST00000560599 FLIIQ13045 1269 aa23.93■■□□□ 1.42
HMBOX1-215ENST00000560599 SIRT2Q8IXJ6 389 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms