RNA–Protein interactions for RNA: ENST00000560587.1

ZNF280D-215, Transcript of zinc finger protein 280D, human

TSL 1 (best)

Gene ZNF280D, Length 1,441 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF280D-215	ENST00000560587	ZCRB1	Q8TBF4	217 aa	Known RBP	33.9	■■■■□ 3.02
ZNF280D-215	ENST00000560587	NCAPD2	Q15021	1401 aa		33.9	■■■■□ 3.02
ZNF280D-215	ENST00000560587	TAT	P17735	454 aa	Predicted RBP	33.88	■■■■□ 3.01
ZNF280D-215	ENST00000560587	PLSCR1	O15162	318 aa		33.87	■■■■□ 3.01
ZNF280D-215	ENST00000560587	PER1	O15534	1290 aa	Predicted RBP	33.87	■■■■□ 3.01
ZNF280D-215	ENST00000560587	ACSBG1	Q96GR2	724 aa		33.87	■■■■□ 3.01
ZNF280D-215	ENST00000560587	KCNQ2	O43526	872 aa		33.85	■■■■□ 3.01
ZNF280D-215	ENST00000560587	EIF4A2	Q14240	407 aa	Known RBP	33.83	■■■■□ 3.01
ZNF280D-215	ENST00000560587	EYA1	Q99502	592 aa		33.83	■■■■□ 3.01
ZNF280D-215	ENST00000560587	DOT1L	Q8TEK3	1739 aa		33.82	■■■■□ 3
ZNF280D-215	ENST00000560587	PKD1L3	Q7Z443	1732 aa		33.81	■■■■□ 3
ZNF280D-215	ENST00000560587	PSD	A5PKW4	1024 aa	Predicted RBP	33.81	■■■■□ 3
ZNF280D-215	ENST00000560587	BTAF1	O14981	1849 aa		33.81	■■■■□ 3
ZNF280D-215	ENST00000560587	PCDH11X	Q9BZA7	1347 aa		33.8	■■■■□ 3
ZNF280D-215	ENST00000560587	PCDH11Y	Q9BZA8	1340 aa		33.8	■■■■□ 3
ZNF280D-215	ENST00000560587	CC2D1B	Q5T0F9	858 aa	Known RBP	33.79	■■■■□ 3
ZNF280D-215	ENST00000560587	NPC1L1	Q9UHC9	1359 aa		33.79	■■■■□ 3
ZNF280D-215	ENST00000560587	KAT6B	Q8WYB5	2073 aa		33.78	■■■■□ 3
ZNF280D-215	ENST00000560587	R3HDM1	Q15032	1099 aa	Known RBP	33.78	■■■■□ 3
ZNF280D-215	ENST00000560587	NBPF14	Q5TI25	921 aa		33.77	■■■■□ 3
ZNF280D-215	ENST00000560587	IGSF1	Q8N6C5	1336 aa		33.74	■■■□□ 2.99
ZNF280D-215	ENST00000560587	SYTL4	Q96C24	671 aa	Predicted RBP	33.72	■■■□□ 2.99
ZNF280D-215	ENST00000560587	TXNRD1	Q16881	649 aa		33.71	■■■□□ 2.99
ZNF280D-215	ENST00000560587	PLEKHG2	Q9H7P9	1386 aa		33.71	■■■□□ 2.99
ZNF280D-215	ENST00000560587	SPG7	Q9UQ90	795 aa		33.7	■■■□□ 2.99
ZNF280D-215	ENST00000560587	PROM2	Q8N271	834 aa		33.7	■■■□□ 2.98
ZNF280D-215	ENST00000560587	PRIM1	P49642	420 aa	Known RBP	33.69	■■■□□ 2.98
ZNF280D-215	ENST00000560587	CYP27B1	O15528	508 aa		33.68	■■■□□ 2.98
ZNF280D-215	ENST00000560587	MTHFS	P49914	203 aa		33.68	■■■□□ 2.98
ZNF280D-215	ENST00000560587	CNGB1	Q14028	1251 aa	Predicted RBP	33.68	■■■□□ 2.98
ZNF280D-215	ENST00000560587	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.68	■■■□□ 2.98
ZNF280D-215	ENST00000560587	LRP5	O75197	1615 aa		33.66	■■■□□ 2.98
ZNF280D-215	ENST00000560587	TOGARAM1	Q9Y4F4	1720 aa		33.63	■■■□□ 2.97
ZNF280D-215	ENST00000560587	IL13	P35225	146 aa		33.62	■■■□□ 2.97
ZNF280D-215	ENST00000560587	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.62	■■■□□ 2.97
ZNF280D-215	ENST00000560587	SRCAP	Q6ZRS2	3230 aa		33.62	■■■□□ 2.97
ZNF280D-215	ENST00000560587	KDR	P35968	1356 aa		33.58	■■■□□ 2.97
ZNF280D-215	ENST00000560587	PAPPA	Q13219	1627 aa		33.58	■■■□□ 2.97
ZNF280D-215	ENST00000560587	LY75	O60449	1722 aa		33.58	■■■□□ 2.97
ZNF280D-215	ENST00000560587	NKX1-1	Q15270	411 aa	Predicted RBP	33.58	■■■□□ 2.97
ZNF280D-215	ENST00000560587	AEBP1	Q8IUX7	1158 aa		33.58	■■■□□ 2.97
ZNF280D-215	ENST00000560587	IFNL2	Q8IZJ0	200 aa		33.58	■■■□□ 2.97
ZNF280D-215	ENST00000560587	PHKG2	P15735	406 aa		33.56	■■■□□ 2.96
ZNF280D-215	ENST00000560587	SULT6B1	Q6IMI4	303 aa		33.56	■■■□□ 2.96
ZNF280D-215	ENST00000560587	STK32B	Q9NY57	414 aa		33.56	■■■□□ 2.96
ZNF280D-215	ENST00000560587	ITGB4	P16144	1822 aa		33.56	■■■□□ 2.96
ZNF280D-215	ENST00000560587	SLC27A3	Q5K4L6	730 aa		33.55	■■■□□ 2.96
ZNF280D-215	ENST00000560587	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.54	■■■□□ 2.96
ZNF280D-215	ENST00000560587	DIAPH1	O60610	1272 aa	Known RBP	33.53	■■■□□ 2.96
ZNF280D-215	ENST00000560587	AMOT	Q4VCS5	1084 aa		33.53	■■■□□ 2.96
ZNF280D-215	ENST00000560587	COL3A1	P02461	1466 aa	Predicted RBP	33.53	■■■□□ 2.96
ZNF280D-215	ENST00000560587	MPRIP	Q6WCQ1	1025 aa		33.53	■■■□□ 2.96
ZNF280D-215	ENST00000560587	SLC15A2	Q16348	729 aa		33.52	■■■□□ 2.96
ZNF280D-215	ENST00000560587	LRRC4B	Q9NT99	713 aa		33.52	■■■□□ 2.96
ZNF280D-215	ENST00000560587	CASZ1	Q86V15	1759 aa		33.5	■■■□□ 2.95
ZNF280D-215	ENST00000560587	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.49	■■■□□ 2.95
ZNF280D-215	ENST00000560587	HSP90AB1	P08238	724 aa	Known RBP	33.46	■■■□□ 2.95
ZNF280D-215	ENST00000560587	CCNL1	Q9UK58	526 aa	Predicted RBP	33.46	■■■□□ 2.95
ZNF280D-215	ENST00000560587	PALLD	Q8WX93	1383 aa		33.46	■■■□□ 2.95
ZNF280D-215	ENST00000560587	TMOD3	Q9NYL9	352 aa		33.45	■■■□□ 2.95
ZNF280D-215	ENST00000560587	HMOX1	P09601	288 aa		33.45	■■■□□ 2.94
ZNF280D-215	ENST00000560587	CFAP53	Q96M91	514 aa		33.45	■■■□□ 2.94
ZNF280D-215	ENST00000560587	C1orf141	Q5JVX7	400 aa		33.44	■■■□□ 2.94
ZNF280D-215	ENST00000560587	PIGB	Q92521	554 aa		33.44	■■■□□ 2.94
ZNF280D-215	ENST00000560587	KCNQ4	P56696	695 aa		33.43	■■■□□ 2.94
ZNF280D-215	ENST00000560587	ZNF827	Q17R98	1081 aa		33.43	■■■□□ 2.94
ZNF280D-215	ENST00000560587	SMARCC1	Q92922	1105 aa	Predicted RBP	33.43	■■■□□ 2.94
ZNF280D-215	ENST00000560587	DCAF5	Q96JK2	942 aa		33.43	■■■□□ 2.94
ZNF280D-215	ENST00000560587	PPP2R1A	P30153	589 aa		33.42	■■■□□ 2.94
ZNF280D-215	ENST00000560587	ZEB1	P37275	1124 aa	Predicted RBP	33.42	■■■□□ 2.94
ZNF280D-215	ENST00000560587	SPON1	Q9HCB6	807 aa		33.4	■■■□□ 2.94
ZNF280D-215	ENST00000560587	C5	P01031	1676 aa		33.4	■■■□□ 2.94
ZNF280D-215	ENST00000560587	KDM6A	O15550	1401 aa	Predicted RBP	33.4	■■■□□ 2.94
ZNF280D-215	ENST00000560587	U2SURP	O15042	1029 aa	Known RBP	33.39	■■■□□ 2.94
ZNF280D-215	ENST00000560587	AKT1S1	Q96B36	256 aa		33.39	■■■□□ 2.94
ZNF280D-215	ENST00000560587	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.39	■■■□□ 2.94
ZNF280D-215	ENST00000560587	QSER1	Q2KHR3	1735 aa		33.39	■■■□□ 2.94
ZNF280D-215	ENST00000560587	ERVV-2	B6SEH9	535 aa		33.37	■■■□□ 2.93
ZNF280D-215	ENST00000560587	HMGB2	P26583	209 aa	Known RBP	33.36	■■■□□ 2.93
ZNF280D-215	ENST00000560587	TAF1L	Q8IZX4	1826 aa		33.34	■■■□□ 2.93
ZNF280D-215	ENST00000560587	TUBGCP6	Q96RT7	1819 aa		33.34	■■■□□ 2.93
ZNF280D-215	ENST00000560587	ZBTB7A	O95365	584 aa		33.33	■■■□□ 2.93
ZNF280D-215	ENST00000560587	AKAP4	Q5JQC9	854 aa		33.33	■■■□□ 2.93
ZNF280D-215	ENST00000560587	TFCP2L1	Q9NZI6	479 aa		33.33	■■■□□ 2.93
ZNF280D-215	ENST00000560587	SCN11A	Q9UI33	1791 aa		33.32	■■■□□ 2.93
ZNF280D-215	ENST00000560587	CABP4	P57796	275 aa		33.31	■■■□□ 2.92
ZNF280D-215	ENST00000560587	ASAP1	Q9ULH1	1129 aa		33.31	■■■□□ 2.92
ZNF280D-215	ENST00000560587	NUDC	Q9Y266	331 aa		33.31	■■■□□ 2.92
ZNF280D-215	ENST00000560587	DDX10	Q13206	875 aa	Known RBP	33.3	■■■□□ 2.92
ZNF280D-215	ENST00000560587	MTFR1L	Q9H019	292 aa		33.28	■■■□□ 2.92
ZNF280D-215	ENST00000560587	ATG3	Q9NT62	314 aa		33.28	■■■□□ 2.92
ZNF280D-215	ENST00000560587	C4B	P0C0L5	1744 aa		33.28	■■■□□ 2.92
ZNF280D-215	ENST00000560587	PNPLA7	Q6ZV29	1317 aa		33.28	■■■□□ 2.92
ZNF280D-215	ENST00000560587	LOC102724428	A0A0B4J2F2	783 aa		33.28	■■■□□ 2.92
ZNF280D-215	ENST00000560587	SIK1	P57059	783 aa		33.28	■■■□□ 2.92
ZNF280D-215	ENST00000560587	MTHFSD	Q2M296	383 aa	Known RBP	33.28	■■■□□ 2.92
ZNF280D-215	ENST00000560587	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.28	■■■□□ 2.92
ZNF280D-215	ENST00000560587	VIRMA	Q69YN4	1812 aa	Known RBP	33.25	■■■□□ 2.91
ZNF280D-215	ENST00000560587	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.25	■■■□□ 2.91
ZNF280D-215	ENST00000560587	ADAMTS7	Q9UKP4	1686 aa		33.23	■■■□□ 2.91

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms