RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 ITGB4P16144 1822 aa12.9□□□□□ -0.34
RABGGTA-217ENST00000560521 SYTL4Q96C24 671 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-217ENST00000560521 ADCY9O60503 1353 aa12.89□□□□□ -0.35
RABGGTA-217ENST00000560521 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
RABGGTA-217ENST00000560521 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
RABGGTA-217ENST00000560521 ANKRD36BQ8N2N9 1353 aa12.88□□□□□ -0.35
RABGGTA-217ENST00000560521 SBNO2Q9Y2G9 1366 aa12.87□□□□□ -0.35
RABGGTA-217ENST00000560521 MSH5O43196 834 aa12.87□□□□□ -0.35
RABGGTA-217ENST00000560521 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
RABGGTA-217ENST00000560521 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-217ENST00000560521 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-217ENST00000560521 CD2APQ9Y5K6 639 aa12.86□□□□□ -0.35
RABGGTA-217ENST00000560521 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
RABGGTA-217ENST00000560521 IP6K1Q92551 441 aa12.85□□□□□ -0.35
RABGGTA-217ENST00000560521 L3MBTL2Q969R5 705 aa12.85□□□□□ -0.35
RABGGTA-217ENST00000560521 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-217ENST00000560521 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-217ENST00000560521 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
RABGGTA-217ENST00000560521 KIF3CO14782 793 aa12.83□□□□□ -0.36
RABGGTA-217ENST00000560521 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
RABGGTA-217ENST00000560521 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.36
RABGGTA-217ENST00000560521 MEGF6O75095 1541 aa12.82□□□□□ -0.36
RABGGTA-217ENST00000560521 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
RABGGTA-217ENST00000560521 USP47Q96K76 1375 aa12.81□□□□□ -0.36
RABGGTA-217ENST00000560521 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-217ENST00000560521 DNAJC5GQ8N7S2 189 aa12.81□□□□□ -0.36
RABGGTA-217ENST00000560521 SLC12A5Q9H2X9 1139 aa12.81□□□□□ -0.36
RABGGTA-217ENST00000560521 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
RABGGTA-217ENST00000560521 KIAA1551Q9HCM1 1747 aa12.81□□□□□ -0.36
RABGGTA-217ENST00000560521 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-217ENST00000560521 EDC4Q6P2E9 1401 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-217ENST00000560521 FBLN1P23142 703 aa12.8□□□□□ -0.36
RABGGTA-217ENST00000560521 TMC1Q8TDI8 760 aa12.8□□□□□ -0.36
RABGGTA-217ENST00000560521 IGSF1Q8N6C5 1336 aa12.8□□□□□ -0.36
RABGGTA-217ENST00000560521 BRCA1P38398 1863 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-217ENST00000560521 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-217ENST00000560521 FLAD1Q8NFF5 587 aa12.79□□□□□ -0.36
RABGGTA-217ENST00000560521 CICQ96RK0 1608 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-217ENST00000560521 HOXC9P31274 260 aa12.78□□□□□ -0.36
RABGGTA-217ENST00000560521 APLP1P51693 650 aa12.78□□□□□ -0.36
RABGGTA-217ENST00000560521 AMIGO3Q86WK7 504 aa12.78□□□□□ -0.36
RABGGTA-217ENST00000560521 A0A1W2PP64 1363 aa12.78□□□□□ -0.36
RABGGTA-217ENST00000560521 MAP3K19Q56UN5 1328 aa12.77□□□□□ -0.37
RABGGTA-217ENST00000560521 SBF1O95248 1867 aa12.76□□□□□ -0.37
RABGGTA-217ENST00000560521 NBPF6Q5VWK0 638 aa12.76□□□□□ -0.37
RABGGTA-217ENST00000560521 SMIM5Q71RC9 77 aa12.76□□□□□ -0.37
RABGGTA-217ENST00000560521 NBPF4Q96M43 638 aa12.76□□□□□ -0.37
RABGGTA-217ENST00000560521 SIN3AQ96ST3 1273 aa12.76□□□□□ -0.37
RABGGTA-217ENST00000560521 ARFGEF1Q9Y6D6 1849 aa12.76□□□□□ -0.37
RABGGTA-217ENST00000560521 TOMM70O94826 608 aa12.75□□□□□ -0.37
RABGGTA-217ENST00000560521 AMPHP49418 695 aa12.75□□□□□ -0.37
RABGGTA-217ENST00000560521 PALLDQ8WX93 1383 aa12.75□□□□□ -0.37
RABGGTA-217ENST00000560521 TERF2IPQ9NYB0 399 aa12.75□□□□□ -0.37
RABGGTA-217ENST00000560521 MPRIPQ6WCQ1 1025 aa12.74□□□□□ -0.37
RABGGTA-217ENST00000560521 USHBP1Q8N6Y0 703 aa12.74□□□□□ -0.37
RABGGTA-217ENST00000560521 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
RABGGTA-217ENST00000560521 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
RABGGTA-217ENST00000560521 HMGB2P26583 209 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-217ENST00000560521 CCDC88AQ3V6T2 1871 aa12.73□□□□□ -0.37
RABGGTA-217ENST00000560521 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-217ENST00000560521 PHF14O94880 888 aa12.72□□□□□ -0.37
RABGGTA-217ENST00000560521 COL13A1Q5TAT6 717 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-217ENST00000560521 COG3Q96JB2 828 aa12.72□□□□□ -0.37
RABGGTA-217ENST00000560521 AK7Q96M32 723 aa12.72□□□□□ -0.37
RABGGTA-217ENST00000560521 RRS1Q15050 365 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-217ENST00000560521 KIF20BQ96Q89 1820 aa12.71□□□□□ -0.38
RABGGTA-217ENST00000560521 PCNTO95613 3336 aa12.7□□□□□ -0.38
RABGGTA-217ENST00000560521 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
RABGGTA-217ENST00000560521 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
RABGGTA-217ENST00000560521 CYP27B1O15528 508 aa12.7□□□□□ -0.38
RABGGTA-217ENST00000560521 TATP17735 454 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-217ENST00000560521 NEUROD1Q13562 356 aa12.7□□□□□ -0.38
RABGGTA-217ENST00000560521 RAPGEF4Q8WZA2 1011 aa12.7□□□□□ -0.38
RABGGTA-217ENST00000560521 PUS7Q96PZ0 661 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-217ENST00000560521 NMRK2Q9NPI5 230 aa12.7□□□□□ -0.38
RABGGTA-217ENST00000560521 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
RABGGTA-217ENST00000560521 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-217ENST00000560521 SSFA2P28290 1259 aa12.69□□□□□ -0.38
RABGGTA-217ENST00000560521 HTRA3P83110 453 aa12.69□□□□□ -0.38
RABGGTA-217ENST00000560521 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
RABGGTA-217ENST00000560521 PIGBQ92521 554 aa12.69□□□□□ -0.38
RABGGTA-217ENST00000560521 SMARCC1Q92922 1105 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-217ENST00000560521 CARD11Q9BXL7 1154 aa12.69□□□□□ -0.38
RABGGTA-217ENST00000560521 PXDNLA1KZ92 1463 aa12.69□□□□□ -0.38
RABGGTA-217ENST00000560521 NSD3Q9BZ95 1437 aa12.69□□□□□ -0.38
RABGGTA-217ENST00000560521 KLRG1Q96E93 195 aa12.68□□□□□ -0.38
RABGGTA-217ENST00000560521 JMYQ8N9B5 988 aa12.67□□□□□ -0.38
RABGGTA-217ENST00000560521 BCS1LQ9Y276 419 aa12.67□□□□□ -0.38
RABGGTA-217ENST00000560521 C4AP0C0L4 1744 aa12.67□□□□□ -0.38
RABGGTA-217ENST00000560521 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-217ENST00000560521 LOC102724428A0A0B4J2F2 783 aa12.66□□□□□ -0.38
RABGGTA-217ENST00000560521 A0A0G2JLW4 131 aa12.66□□□□□ -0.38
RABGGTA-217ENST00000560521 CAPN15O75808 1086 aa12.66□□□□□ -0.38
RABGGTA-217ENST00000560521 MMP10P09238 476 aa12.66□□□□□ -0.38
RABGGTA-217ENST00000560521 SIK1P57059 783 aa12.66□□□□□ -0.38
RABGGTA-217ENST00000560521 TGFB2P61812 414 aa12.66□□□□□ -0.38
RABGGTA-217ENST00000560521 HSP90AB2PQ58FF8 381 aa12.66□□□□□ -0.38
RABGGTA-217ENST00000560521 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
RABGGTA-217ENST00000560521 RBM46Q8TBY0 533 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-217ENST00000560521 TNRC6CQ9HCJ0 1690 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms