RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 SBF2Q86WG5 1849 aa20.87■□□□□ 0.93
LYSMD2-204ENST00000560491 MYBBP1AQ9BQG0 1328 aaKnown RBP20.86■□□□□ 0.93
LYSMD2-204ENST00000560491 SULT6B1Q6IMI4 303 aa20.86■□□□□ 0.93
LYSMD2-204ENST00000560491 ZCRB1Q8TBF4 217 aaKnown RBP20.85■□□□□ 0.93
LYSMD2-204ENST00000560491 UPF1Q92900 1129 aaKnown RBP eCLIP20.85■□□□□ 0.93
LYSMD2-204ENST00000560491 KDRP35968 1356 aa20.85■□□□□ 0.93
LYSMD2-204ENST00000560491 U2SURPO15042 1029 aaKnown RBP20.84■□□□□ 0.93
LYSMD2-204ENST00000560491 HMOX1P09601 288 aa20.84■□□□□ 0.93
LYSMD2-204ENST00000560491 DDX54Q8TDD1 881 aaKnown RBP20.84■□□□□ 0.93
LYSMD2-204ENST00000560491 TNS1Q9HBL0 1735 aaKnown RBP20.84■□□□□ 0.93
LYSMD2-204ENST00000560491 FAM196AQ6ZSG2 479 aa20.83■□□□□ 0.93
LYSMD2-204ENST00000560491 DOT1LQ8TEK3 1739 aa20.81■□□□□ 0.92
LYSMD2-204ENST00000560491 PCDH11XQ9BZA7 1347 aa20.79■□□□□ 0.92
LYSMD2-204ENST00000560491 PCDH11YQ9BZA8 1340 aa20.79■□□□□ 0.92
LYSMD2-204ENST00000560491 TRIM37O94972 964 aa20.79■□□□□ 0.92
LYSMD2-204ENST00000560491 NUDCQ9Y266 331 aa20.79■□□□□ 0.92
LYSMD2-204ENST00000560491 NHSQ6T4R5 1651 aa20.79■□□□□ 0.92
LYSMD2-204ENST00000560491 BCL9O00512 1426 aa20.78■□□□□ 0.92
LYSMD2-204ENST00000560491 SPG7Q9UQ90 795 aa20.78■□□□□ 0.92
LYSMD2-204ENST00000560491 TOGARAM1Q9Y4F4 1720 aa20.78■□□□□ 0.92
LYSMD2-204ENST00000560491 PLEKHG2Q9H7P9 1386 aa20.77■□□□□ 0.92
LYSMD2-204ENST00000560491 CYP27B1O15528 508 aa20.77■□□□□ 0.92
LYSMD2-204ENST00000560491 ANP32CO43423 234 aa20.77■□□□□ 0.92
LYSMD2-204ENST00000560491 KAT6BQ8WYB5 2073 aa20.76■□□□□ 0.91
LYSMD2-204ENST00000560491 U2AF1L5P0DN76 240 aaPredicted RBP20.76■□□□□ 0.91
LYSMD2-204ENST00000560491 U2AF1Q01081 240 aaKnown RBP eCLIP20.76■□□□□ 0.91
LYSMD2-204ENST00000560491 ACSBG1Q96GR2 724 aa20.76■□□□□ 0.91
LYSMD2-204ENST00000560491 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.76■□□□□ 0.91
LYSMD2-204ENST00000560491 PLEKHO1Q53GL0 409 aaPredicted RBP20.75■□□□□ 0.91
LYSMD2-204ENST00000560491 PTF1AQ7RTS3 328 aa20.75■□□□□ 0.91
LYSMD2-204ENST00000560491 RSPH6AQ9H0K4 717 aa20.74■□□□□ 0.91
LYSMD2-204ENST00000560491 PHKG2P15735 406 aa20.73■□□□□ 0.91
LYSMD2-204ENST00000560491 BTAF1O14981 1849 aa20.73■□□□□ 0.91
LYSMD2-204ENST00000560491 KCNQ2O43526 872 aa20.72■□□□□ 0.91
LYSMD2-204ENST00000560491 PRKAR2BP31323 418 aa20.72■□□□□ 0.91
LYSMD2-204ENST00000560491 SF3B2Q13435 895 aaKnown RBP20.72■□□□□ 0.91
LYSMD2-204ENST00000560491 AMOTQ4VCS5 1084 aa20.72■□□□□ 0.91
LYSMD2-204ENST00000560491 ZNF530Q6P9A1 599 aaPredicted RBP20.72■□□□□ 0.91
LYSMD2-204ENST00000560491 CCDC125Q86Z20 511 aa20.72■□□□□ 0.91
LYSMD2-204ENST00000560491 ITGB4P16144 1822 aa20.71■□□□□ 0.91
LYSMD2-204ENST00000560491 VIRMAQ69YN4 1812 aaKnown RBP20.71■□□□□ 0.91
LYSMD2-204ENST00000560491 CCDC184Q52MB2 194 aa20.71■□□□□ 0.91
LYSMD2-204ENST00000560491 DEFB132Q7Z7B7 95 aa20.71■□□□□ 0.91
LYSMD2-204ENST00000560491 IFNL2Q8IZJ0 200 aa20.71■□□□□ 0.91
LYSMD2-204ENST00000560491 MSH5O43196 834 aa20.7■□□□□ 0.9
LYSMD2-204ENST00000560491 BCL11BQ9C0K0 894 aaPredicted RBP20.7■□□□□ 0.9
LYSMD2-204ENST00000560491 MTHFSDQ2M296 383 aaKnown RBP20.69■□□□□ 0.9
LYSMD2-204ENST00000560491 FCHSD2O94868 740 aa20.68■□□□□ 0.9
LYSMD2-204ENST00000560491 APBA3O96018 575 aa20.68■□□□□ 0.9
LYSMD2-204ENST00000560491 NKX1-1Q15270 411 aaPredicted RBP20.68■□□□□ 0.9
LYSMD2-204ENST00000560491 SYTL4Q96C24 671 aaPredicted RBP20.68■□□□□ 0.9
LYSMD2-204ENST00000560491 PHACTR3Q96KR7 559 aa20.68■□□□□ 0.9
LYSMD2-204ENST00000560491 KDM6AO15550 1401 aaPredicted RBP20.68■□□□□ 0.9
LYSMD2-204ENST00000560491 SCN11AQ9UI33 1791 aa20.67■□□□□ 0.9
LYSMD2-204ENST00000560491 PRIM1P49642 420 aaKnown RBP20.67■□□□□ 0.9
LYSMD2-204ENST00000560491 C1orf141Q5JVX7 400 aa20.67■□□□□ 0.9
LYSMD2-204ENST00000560491 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
LYSMD2-204ENST00000560491 BAG6P46379 1132 aa20.66■□□□□ 0.9
LYSMD2-204ENST00000560491 EN1Q05925 392 aaPredicted RBP20.66■□□□□ 0.9
LYSMD2-204ENST00000560491 RGPD3A6NKT7 1758 aaPredicted RBP20.66■□□□□ 0.9
LYSMD2-204ENST00000560491 RGPD4Q7Z3J3 1758 aa20.66■□□□□ 0.9
LYSMD2-204ENST00000560491 WDR43Q15061 677 aaKnown RBP eCLIP20.64■□□□□ 0.89
LYSMD2-204ENST00000560491 AKAP4Q5JQC9 854 aa20.64■□□□□ 0.89
LYSMD2-204ENST00000560491 MPRIPQ6WCQ1 1025 aa20.64■□□□□ 0.89
LYSMD2-204ENST00000560491 RREB1Q92766 1687 aa20.64■□□□□ 0.89
LYSMD2-204ENST00000560491 DLG5Q8TDM6 1919 aa20.63■□□□□ 0.89
LYSMD2-204ENST00000560491 HSP90AB1P08238 724 aaKnown RBP20.63■□□□□ 0.89
LYSMD2-204ENST00000560491 PLEKHF1Q96S99 279 aa20.63■□□□□ 0.89
LYSMD2-204ENST00000560491 ADAMTS7Q9UKP4 1686 aa20.63■□□□□ 0.89
LYSMD2-204ENST00000560491 EZH2Q15910 746 aaKnown RBP20.62■□□□□ 0.89
LYSMD2-204ENST00000560491 GAS2L2Q8NHY3 880 aa20.62■□□□□ 0.89
LYSMD2-204ENST00000560491 DCAF5Q96JK2 942 aa20.62■□□□□ 0.89
LYSMD2-204ENST00000560491 MRS2Q9HD23 443 aa20.62■□□□□ 0.89
LYSMD2-204ENST00000560491 ADAMTS8Q9UP79 889 aa20.61■□□□□ 0.89
LYSMD2-204ENST00000560491 NUP188Q5SRE5 1749 aa20.61■□□□□ 0.89
LYSMD2-204ENST00000560491 MAP3K5Q99683 1374 aa20.6■□□□□ 0.89
LYSMD2-204ENST00000560491 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
LYSMD2-204ENST00000560491 CCDC146Q8IYE0 955 aa20.6■□□□□ 0.89
LYSMD2-204ENST00000560491 CAMKK2Q96RR4 588 aa20.6■□□□□ 0.89
LYSMD2-204ENST00000560491 LY75O60449 1722 aa20.6■□□□□ 0.89
LYSMD2-204ENST00000560491 LGR6Q9HBX8 967 aa20.59■□□□□ 0.89
LYSMD2-204ENST00000560491 MAPK8IP3Q9UPT6 1336 aa20.58■□□□□ 0.89
LYSMD2-204ENST00000560491 NEFMP07197 916 aa20.58■□□□□ 0.89
LYSMD2-204ENST00000560491 PIGBQ92521 554 aa20.58■□□□□ 0.89
LYSMD2-204ENST00000560491 TMOD3Q9NYL9 352 aa20.58■□□□□ 0.89
LYSMD2-204ENST00000560491 MRC1P22897 1456 aa20.57■□□□□ 0.88
LYSMD2-204ENST00000560491 GNAT3A8MTJ3 354 aa20.57■□□□□ 0.88
LYSMD2-204ENST00000560491 ERVV-2B6SEH9 535 aa20.57■□□□□ 0.88
LYSMD2-204ENST00000560491 PLSCR1O15162 318 aa20.57■□□□□ 0.88
LYSMD2-204ENST00000560491 RNMTO43148 476 aaKnown RBP20.57■□□□□ 0.88
LYSMD2-204ENST00000560491 PNNQ9H307 717 aaKnown RBP20.57■□□□□ 0.88
LYSMD2-204ENST00000560491 CABP4P57796 275 aa20.56■□□□□ 0.88
LYSMD2-204ENST00000560491 SIPA1L3O60292 1781 aaPredicted RBP20.56■□□□□ 0.88
LYSMD2-204ENST00000560491 PNISRQ8TF01 805 aaKnown RBP20.55■□□□□ 0.88
LYSMD2-204ENST00000560491 NFE2L2Q16236 605 aa20.54■□□□□ 0.88
LYSMD2-204ENST00000560491 PROM2Q8N271 834 aa20.54■□□□□ 0.88
LYSMD2-204ENST00000560491 IL17REQ8NFR9 667 aa20.54■□□□□ 0.88
LYSMD2-204ENST00000560491 PAPPAQ13219 1627 aa20.53■□□□□ 0.88
LYSMD2-204ENST00000560491 TXNRD1Q16881 649 aa20.53■□□□□ 0.88
LYSMD2-204ENST00000560491 NFATC2IPQ8NCF5 419 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms