RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 TESK2Q96S53 571 aa11.1□□□□□ -0.63
LRRC28-219ENST00000560483 USP6P35125 1406 aa11.09□□□□□ -0.63
LRRC28-219ENST00000560483 MARF1Q9Y4F3 1742 aaKnown RBP11.09□□□□□ -0.63
LRRC28-219ENST00000560483 ALS2Q96Q42 1657 aa11.09□□□□□ -0.63
LRRC28-219ENST00000560483 POTEEQ6S8J3 1075 aa11.09□□□□□ -0.63
LRRC28-219ENST00000560483 TRPC5Q9UL62 973 aaPredicted RBP11.09□□□□□ -0.63
LRRC28-219ENST00000560483 AKAP12Q02952 1782 aa11.08□□□□□ -0.64
LRRC28-219ENST00000560483 TTC21BQ7Z4L5 1316 aa11.08□□□□□ -0.64
LRRC28-219ENST00000560483 EVA1CP58658 441 aa11.07□□□□□ -0.64
LRRC28-219ENST00000560483 CHRNA2Q15822 529 aa11.07□□□□□ -0.64
LRRC28-219ENST00000560483 STRN4Q9NRL3 753 aa11.07□□□□□ -0.64
LRRC28-219ENST00000560483 BTG4Q9NY30 223 aa11.07□□□□□ -0.64
LRRC28-219ENST00000560483 ABCA3Q99758 1704 aa11.06□□□□□ -0.64
LRRC28-219ENST00000560483 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
LRRC28-219ENST00000560483 RBM6P78332 1123 aaKnown RBP11.06□□□□□ -0.64
LRRC28-219ENST00000560483 ANKRD13DQ6ZTN6 518 aa11.06□□□□□ -0.64
LRRC28-219ENST00000560483 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
LRRC28-219ENST00000560483 TTC21AQ8NDW8 1320 aa11.06□□□□□ -0.64
LRRC28-219ENST00000560483 A0A1W2PP64 1363 aa11.05□□□□□ -0.64
LRRC28-219ENST00000560483 KIAA0232Q92628 1395 aa11.05□□□□□ -0.64
LRRC28-219ENST00000560483 NINLQ9Y2I6 1382 aa11.05□□□□□ -0.64
LRRC28-219ENST00000560483 FAM83GA6ND36 823 aa11.05□□□□□ -0.64
LRRC28-219ENST00000560483 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-219ENST00000560483 NME9Q86XW9 330 aa11.05□□□□□ -0.64
LRRC28-219ENST00000560483 FNBP4Q8N3X1 1017 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-219ENST00000560483 PUS7Q96PZ0 661 aaKnown RBP11.05□□□□□ -0.64
LRRC28-219ENST00000560483 PLCH1Q4KWH8 1693 aa11.04□□□□□ -0.64
LRRC28-219ENST00000560483 GCP02774 474 aa11.04□□□□□ -0.64
LRRC28-219ENST00000560483 MFRPQ9BY79 579 aa11.04□□□□□ -0.64
LRRC28-219ENST00000560483 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
LRRC28-219ENST00000560483 USP35Q9P2H5 1018 aa11.04□□□□□ -0.64
LRRC28-219ENST00000560483 PHRF1Q9P1Y6 1649 aaKnown RBP11.04□□□□□ -0.64
LRRC28-219ENST00000560483 MON2Q7Z3U7 1717 aa11.04□□□□□ -0.64
LRRC28-219ENST00000560483 KCNH5Q8NCM2 988 aa11.03□□□□□ -0.64
LRRC28-219ENST00000560483 COG3Q96JB2 828 aa11.03□□□□□ -0.64
LRRC28-219ENST00000560483 COL14A1Q05707 1796 aaKnown RBP11.03□□□□□ -0.64
LRRC28-219ENST00000560483 CPSF1Q10570 1443 aaKnown RBP11.02□□□□□ -0.64
LRRC28-219ENST00000560483 EDC4Q6P2E9 1401 aaKnown RBP11.02□□□□□ -0.64
LRRC28-219ENST00000560483 PIK3C2AO00443 1686 aa11.02□□□□□ -0.64
LRRC28-219ENST00000560483 SOCS7O14512 581 aa11.02□□□□□ -0.65
LRRC28-219ENST00000560483 KIF3CO14782 793 aa11.02□□□□□ -0.65
LRRC28-219ENST00000560483 CSB-PGBD3P0DP91 1061 aa11.02□□□□□ -0.65
LRRC28-219ENST00000560483 GJD4Q96KN9 370 aaPredicted RBP11.02□□□□□ -0.65
LRRC28-219ENST00000560483 ANKRD36BQ8N2N9 1353 aa11.02□□□□□ -0.65
LRRC28-219ENST00000560483 C2orf72A6NCS6 295 aa11.01□□□□□ -0.65
LRRC28-219ENST00000560483 NUDT7P0C024 238 aa11.01□□□□□ -0.65
LRRC28-219ENST00000560483 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.65
LRRC28-219ENST00000560483 AXIN2Q9Y2T1 843 aa11.01□□□□□ -0.65
LRRC28-219ENST00000560483 NRKQ7Z2Y5 1582 aa11.01□□□□□ -0.65
LRRC28-219ENST00000560483 NWD2Q9ULI1 1742 aa11.01□□□□□ -0.65
LRRC28-219ENST00000560483 BCL9LQ86UU0 1499 aa11□□□□□ -0.65
LRRC28-219ENST00000560483 VPS72Q15906 364 aa11□□□□□ -0.65
LRRC28-219ENST00000560483 GGNBP2Q9H3C7 697 aa11□□□□□ -0.65
LRRC28-219ENST00000560483 USP19O94966 1318 aa11□□□□□ -0.65
LRRC28-219ENST00000560483 CRYBG1Q9Y4K1 1723 aa11□□□□□ -0.65
LRRC28-219ENST00000560483 ATRNO75882 1429 aa11□□□□□ -0.65
LRRC28-219ENST00000560483 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
LRRC28-219ENST00000560483 SLIT2O94813 1529 aa10.99□□□□□ -0.65
LRRC28-219ENST00000560483 CNGB1Q14028 1251 aaPredicted RBP10.99□□□□□ -0.65
LRRC28-219ENST00000560483 FAM98CQ17RN3 349 aaKnown RBP10.99□□□□□ -0.65
LRRC28-219ENST00000560483 NSD3Q9BZ95 1437 aa10.99□□□□□ -0.65
LRRC28-219ENST00000560483 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.98□□□□□ -0.65
LRRC28-219ENST00000560483 TOM1L2Q6ZVM7 507 aa10.98□□□□□ -0.65
LRRC28-219ENST00000560483 SSH2Q76I76 1423 aa10.98□□□□□ -0.65
LRRC28-219ENST00000560483 AMPHP49418 695 aa10.97□□□□□ -0.65
LRRC28-219ENST00000560483 LTV1Q96GA3 475 aaPredicted RBP10.97□□□□□ -0.65
LRRC28-219ENST00000560483 PANK3Q9H999 370 aa10.97□□□□□ -0.65
LRRC28-219ENST00000560483 RGS12O14924 1447 aa10.97□□□□□ -0.65
LRRC28-219ENST00000560483 KIF20BQ96Q89 1820 aa10.96□□□□□ -0.65
LRRC28-219ENST00000560483 SLIT3O75094 1523 aa10.96□□□□□ -0.65
LRRC28-219ENST00000560483 CPDO75976 1380 aa10.96□□□□□ -0.65
LRRC28-219ENST00000560483 CGNL1Q0VF96 1302 aa10.96□□□□□ -0.65
LRRC28-219ENST00000560483 PPM1GO15355 546 aaPredicted RBP10.96□□□□□ -0.65
LRRC28-219ENST00000560483 TNNT2P45379 298 aaPredicted RBP10.96□□□□□ -0.65
LRRC28-219ENST00000560483 LARP1Q6PKG0 1096 aaKnown RBP10.96□□□□□ -0.65
LRRC28-219ENST00000560483 SEPT12Q8IYM1 358 aa10.96□□□□□ -0.65
LRRC28-219ENST00000560483 LHX6Q9UPM6 363 aa10.96□□□□□ -0.65
LRRC28-219ENST00000560483 STK24Q9Y6E0 443 aa10.96□□□□□ -0.65
LRRC28-219ENST00000560483 LTN1O94822 1766 aa10.95□□□□□ -0.66
LRRC28-219ENST00000560483 NRAPQ86VF7 1730 aa10.95□□□□□ -0.66
LRRC28-219ENST00000560483 MYOM1P52179 1685 aa10.95□□□□□ -0.66
LRRC28-219ENST00000560483 USP31Q70CQ4 1352 aa10.95□□□□□ -0.66
LRRC28-219ENST00000560483 KNSTRNQ9Y448 316 aa10.95□□□□□ -0.66
LRRC28-219ENST00000560483 CDK12Q9NYV4 1490 aaPredicted RBP10.94□□□□□ -0.66
LRRC28-219ENST00000560483 AATKQ6ZMQ8 1374 aa10.94□□□□□ -0.66
LRRC28-219ENST00000560483 KIF7Q2M1P5 1343 aa10.94□□□□□ -0.66
LRRC28-219ENST00000560483 SPATA31A5Q5VU36 1347 aa10.94□□□□□ -0.66
LRRC28-219ENST00000560483 SPATA31A7Q8IWB4 1347 aa10.94□□□□□ -0.66
LRRC28-219ENST00000560483 C11orf95C9JLR9 678 aaPredicted RBP10.94□□□□□ -0.66
LRRC28-219ENST00000560483 FYB1O15117 783 aa10.94□□□□□ -0.66
LRRC28-219ENST00000560483 ARHGEF25Q86VW2 580 aa10.94□□□□□ -0.66
LRRC28-219ENST00000560483 NLRP2Q9NX02 1062 aa10.94□□□□□ -0.66
LRRC28-219ENST00000560483 RGPD5Q99666 1765 aa10.94□□□□□ -0.66
LRRC28-219ENST00000560483 GLI3P10071 1580 aa10.94□□□□□ -0.66
LRRC28-219ENST00000560483 CAMTA1Q9Y6Y1 1673 aa10.93□□□□□ -0.66
LRRC28-219ENST00000560483 FBLN1P23142 703 aa10.93□□□□□ -0.66
LRRC28-219ENST00000560483 RRS1Q15050 365 aaKnown RBP10.93□□□□□ -0.66
LRRC28-219ENST00000560483 KRT27Q7Z3Y8 459 aa10.93□□□□□ -0.66
LRRC28-219ENST00000560483 TCP11L2Q8N4U5 519 aa10.93□□□□□ -0.66
LRRC28-219ENST00000560483 CARD14Q9BXL6 1004 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms