RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 PPM1GO15355 546 aaPredicted RBP12.36□□□□□ -0.43
RTF1-206ENST00000560447 IGHDP01880 384 aa12.36□□□□□ -0.43
RTF1-206ENST00000560447 RLBP1P12271 317 aa12.36□□□□□ -0.43
RTF1-206ENST00000560447 CEBPAP49715 358 aaPredicted RBP12.36□□□□□ -0.43
RTF1-206ENST00000560447 C8orf34Q49A92 452 aa12.36□□□□□ -0.43
RTF1-206ENST00000560447 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
RTF1-206ENST00000560447 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
RTF1-206ENST00000560447 MARF1Q9Y4F3 1742 aaKnown RBP12.36□□□□□ -0.43
RTF1-206ENST00000560447 SLC26A8Q96RN1 970 aa12.35□□□□□ -0.43
RTF1-206ENST00000560447 PHRF1Q9P1Y6 1649 aaKnown RBP12.34□□□□□ -0.43
RTF1-206ENST00000560447 TRIM27P14373 513 aa12.34□□□□□ -0.43
RTF1-206ENST00000560447 KDRP35968 1356 aa12.33□□□□□ -0.44
RTF1-206ENST00000560447 KIAA0232Q92628 1395 aa12.33□□□□□ -0.44
RTF1-206ENST00000560447 EIF4A2Q14240 407 aaKnown RBP12.33□□□□□ -0.44
RTF1-206ENST00000560447 PHACTR3Q96KR7 559 aa12.33□□□□□ -0.44
RTF1-206ENST00000560447 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
RTF1-206ENST00000560447 RTL1A6NKG5 1358 aa12.32□□□□□ -0.44
RTF1-206ENST00000560447 VAMP4O75379 141 aa12.32□□□□□ -0.44
RTF1-206ENST00000560447 HMOX1P09601 288 aa12.32□□□□□ -0.44
RTF1-206ENST00000560447 BCL2L13Q9BXK5 485 aa12.32□□□□□ -0.44
RTF1-206ENST00000560447 NOB1Q9ULX3 412 aaKnown RBP12.32□□□□□ -0.44
RTF1-206ENST00000560447 LRRC37A3O60309 1634 aa12.32□□□□□ -0.44
RTF1-206ENST00000560447 CACNA1FO60840 1977 aa12.32□□□□□ -0.44
RTF1-206ENST00000560447 NCKAP5LQ9HCH0 1330 aa12.32□□□□□ -0.44
RTF1-206ENST00000560447 NWD1Q149M9 1564 aa12.31□□□□□ -0.44
RTF1-206ENST00000560447 RRS1Q15050 365 aaKnown RBP12.31□□□□□ -0.44
RTF1-206ENST00000560447 ANKLE2Q86XL3 938 aa12.31□□□□□ -0.44
RTF1-206ENST00000560447 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
RTF1-206ENST00000560447 API5Q9BZZ5 524 aaKnown RBP12.31□□□□□ -0.44
RTF1-206ENST00000560447 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
RTF1-206ENST00000560447 HTATSF1O43719 755 aaKnown RBP12.3□□□□□ -0.44
RTF1-206ENST00000560447 RGS3P49796 1198 aa12.3□□□□□ -0.44
RTF1-206ENST00000560447 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
RTF1-206ENST00000560447 SMC5Q8IY18 1101 aa12.3□□□□□ -0.44
RTF1-206ENST00000560447 NGDNQ8NEJ9 315 aaKnown RBP12.3□□□□□ -0.44
RTF1-206ENST00000560447 SOS1Q07889 1333 aaPredicted RBP12.3□□□□□ -0.44
RTF1-206ENST00000560447 ADGRL3Q9HAR2 1447 aa12.29□□□□□ -0.44
RTF1-206ENST00000560447 ITPRIPQ8IWB1 547 aa12.29□□□□□ -0.44
RTF1-206ENST00000560447 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
RTF1-206ENST00000560447 PDZRN3Q9UPQ7 1066 aa12.29□□□□□ -0.44
RTF1-206ENST00000560447 TNNQ9UQP3 1299 aa12.29□□□□□ -0.44
RTF1-206ENST00000560447 ABCC4O15439 1325 aa12.29□□□□□ -0.44
RTF1-206ENST00000560447 IGSF1Q8N6C5 1336 aa12.29□□□□□ -0.44
RTF1-206ENST00000560447 MAP3K13O43283 966 aa12.28□□□□□ -0.44
RTF1-206ENST00000560447 FBLN1P23142 703 aa12.28□□□□□ -0.44
RTF1-206ENST00000560447 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
RTF1-206ENST00000560447 TWISTNBQ3B726 338 aaPredicted RBP12.28□□□□□ -0.44
RTF1-206ENST00000560447 SULT6B1Q6IMI4 303 aa12.28□□□□□ -0.44
RTF1-206ENST00000560447 NPM2Q86SE8 214 aaKnown RBP12.28□□□□□ -0.44
RTF1-206ENST00000560447 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
RTF1-206ENST00000560447 GAS2L2Q8NHY3 880 aa12.28□□□□□ -0.44
RTF1-206ENST00000560447 BABAM1Q9NWV8 329 aa12.28□□□□□ -0.44
RTF1-206ENST00000560447 USP35Q9P2H5 1018 aa12.28□□□□□ -0.44
RTF1-206ENST00000560447 MAP3K19Q56UN5 1328 aa12.28□□□□□ -0.44
RTF1-206ENST00000560447 LTN1O94822 1766 aa12.28□□□□□ -0.44
RTF1-206ENST00000560447 KIF1AQ12756 1690 aa12.27□□□□□ -0.45
RTF1-206ENST00000560447 CHL1O00533 1208 aa12.27□□□□□ -0.45
RTF1-206ENST00000560447 ATMINO43313 823 aaPredicted RBP12.27□□□□□ -0.45
RTF1-206ENST00000560447 KCNA6P17658 529 aa12.27□□□□□ -0.45
RTF1-206ENST00000560447 N4BP2Q86UW6 1770 aaPredicted RBP12.27□□□□□ -0.45
RTF1-206ENST00000560447 EIF5BO60841 1220 aaKnown RBP12.26□□□□□ -0.45
RTF1-206ENST00000560447 GCC1Q96CN9 775 aa12.26□□□□□ -0.45
RTF1-206ENST00000560447 UPF2Q9HAU5 1272 aaKnown RBP12.26□□□□□ -0.45
RTF1-206ENST00000560447 CRB1P82279 1406 aa12.26□□□□□ -0.45
RTF1-206ENST00000560447 SKAP1Q86WV1 359 aa12.25□□□□□ -0.45
RTF1-206ENST00000560447 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
RTF1-206ENST00000560447 LAS1LQ9Y4W2 734 aaKnown RBP12.25□□□□□ -0.45
RTF1-206ENST00000560447 PTPRCP08575 1304 aa12.25□□□□□ -0.45
RTF1-206ENST00000560447 NPHP4O75161 1426 aaPredicted RBP12.25□□□□□ -0.45
RTF1-206ENST00000560447 ZBTB7BO15156 539 aaPredicted RBP12.24□□□□□ -0.45
RTF1-206ENST00000560447 NFAT5O94916 1531 aa12.24□□□□□ -0.45
RTF1-206ENST00000560447 AMPHP49418 695 aa12.24□□□□□ -0.45
RTF1-206ENST00000560447 HSP90AB2PQ58FF8 381 aa12.24□□□□□ -0.45
RTF1-206ENST00000560447 PHF8Q9UPP1 1060 aa12.23□□□□□ -0.45
RTF1-206ENST00000560447 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
RTF1-206ENST00000560447 LMTK3Q96Q04 1460 aa12.22□□□□□ -0.45
RTF1-206ENST00000560447 MST1RQ04912 1400 aa12.22□□□□□ -0.45
RTF1-206ENST00000560447 NLRP6P59044 892 aa12.22□□□□□ -0.45
RTF1-206ENST00000560447 NUCB1Q02818 461 aa12.22□□□□□ -0.45
RTF1-206ENST00000560447 BECN1Q14457 450 aa12.22□□□□□ -0.45
RTF1-206ENST00000560447 INTS3Q68E01 1043 aaKnown RBP12.22□□□□□ -0.45
RTF1-206ENST00000560447 AEBP1Q8IUX7 1158 aa12.22□□□□□ -0.45
RTF1-206ENST00000560447 TSPYL6Q8N831 410 aa12.22□□□□□ -0.45
RTF1-206ENST00000560447 C8orf58Q8NAV2 365 aa12.22□□□□□ -0.45
RTF1-206ENST00000560447 RTF1Q92541 710 aaKnown RBP12.22□□□□□ -0.45
RTF1-206ENST00000560447 SGIP1Q9BQI5 828 aa12.22□□□□□ -0.45
RTF1-206ENST00000560447 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
RTF1-206ENST00000560447 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
RTF1-206ENST00000560447 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
RTF1-206ENST00000560447 SLIT3O75094 1523 aa12.21□□□□□ -0.45
RTF1-206ENST00000560447 USP19O94966 1318 aa12.21□□□□□ -0.45
RTF1-206ENST00000560447 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
RTF1-206ENST00000560447 HOXC9P31274 260 aa12.21□□□□□ -0.45
RTF1-206ENST00000560447 RTL5Q5HYW3 569 aaPredicted RBP12.21□□□□□ -0.45
RTF1-206ENST00000560447 KCNH5Q8NCM2 988 aa12.21□□□□□ -0.45
RTF1-206ENST00000560447 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
RTF1-206ENST00000560447 CAMTA1Q9Y6Y1 1673 aa12.21□□□□□ -0.45
RTF1-206ENST00000560447 TRPM3Q9HCF6 1732 aaPredicted RBP12.2□□□□□ -0.46
RTF1-206ENST00000560447 LMO7Q8WWI1 1683 aa12.2□□□□□ -0.46
RTF1-206ENST00000560447 EYA1Q99502 592 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms