RNA–Protein interactions for RNA: ENST00000560356.5

CPNE6-215, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-215ENST00000560356 NSD2O96028 1365 aa21.57■■□□□ 1.04
CPNE6-215ENST00000560356 TAF1LQ8IZX4 1826 aa21.54■■□□□ 1.04
CPNE6-215ENST00000560356 EDC4Q6P2E9 1401 aaKnown RBP21.54■■□□□ 1.04
CPNE6-215ENST00000560356 MSH5O43196 834 aa21.53■■□□□ 1.04
CPNE6-215ENST00000560356 PRIM1P49642 420 aaKnown RBP21.53■■□□□ 1.04
CPNE6-215ENST00000560356 LTV1Q96GA3 475 aaPredicted RBP21.52■■□□□ 1.04
CPNE6-215ENST00000560356 CCNL1Q9UK58 526 aaPredicted RBP21.52■■□□□ 1.04
CPNE6-215ENST00000560356 MEGF6O75095 1541 aa21.5■■□□□ 1.03
CPNE6-215ENST00000560356 ADCY9O60503 1353 aa21.5■■□□□ 1.03
CPNE6-215ENST00000560356 MSL1Q68DK7 614 aa21.5■■□□□ 1.03
CPNE6-215ENST00000560356 HDGFL2Q7Z4V5 671 aaPredicted RBP21.5■■□□□ 1.03
CPNE6-215ENST00000560356 COL23A1Q86Y22 540 aaPredicted RBP21.5■■□□□ 1.03
CPNE6-215ENST00000560356 TMC1Q8TDI8 760 aa21.5■■□□□ 1.03
CPNE6-215ENST00000560356 GPBP1L1Q9HC44 474 aaPredicted RBP21.5■■□□□ 1.03
CPNE6-215ENST00000560356 IP6K1Q92551 441 aa21.49■■□□□ 1.03
CPNE6-215ENST00000560356 A0A1W2PP64 1363 aa21.48■■□□□ 1.03
CPNE6-215ENST00000560356 USP47Q96K76 1375 aa21.48■■□□□ 1.03
CPNE6-215ENST00000560356 HSPA6P17066 643 aa21.46■■□□□ 1.03
CPNE6-215ENST00000560356 TOGARAM1Q9Y4F4 1720 aa21.46■■□□□ 1.03
CPNE6-215ENST00000560356 ZNF526Q8TF50 670 aaPredicted RBP21.45■■□□□ 1.02
CPNE6-215ENST00000560356 SLC12A5Q9H2X9 1139 aa21.45■■□□□ 1.02
CPNE6-215ENST00000560356 ZCRB1Q8TBF4 217 aaKnown RBP21.44■■□□□ 1.02
CPNE6-215ENST00000560356 CD2APQ9Y5K6 639 aa21.44■■□□□ 1.02
CPNE6-215ENST00000560356 C4BP0C0L5 1744 aa21.43■■□□□ 1.02
CPNE6-215ENST00000560356 UBR3Q6ZT12 1888 aa21.43■■□□□ 1.02
CPNE6-215ENST00000560356 ITGB4P16144 1822 aa21.42■■□□□ 1.02
CPNE6-215ENST00000560356 TERF2IPQ9NYB0 399 aa21.42■■□□□ 1.02
CPNE6-215ENST00000560356 MAP3K19Q56UN5 1328 aa21.41■■□□□ 1.02
CPNE6-215ENST00000560356 HOXC9P31274 260 aa21.41■■□□□ 1.02
CPNE6-215ENST00000560356 SIN3AQ96ST3 1273 aa21.41■■□□□ 1.02
CPNE6-215ENST00000560356 AMPHP49418 695 aa21.38■■□□□ 1.01
CPNE6-215ENST00000560356 RTL1A6NKG5 1358 aa21.37■■□□□ 1.01
CPNE6-215ENST00000560356 PALLDQ8WX93 1383 aa21.37■■□□□ 1.01
CPNE6-215ENST00000560356 CICQ96RK0 1608 aaPredicted RBP21.37■■□□□ 1.01
CPNE6-215ENST00000560356 FLAD1Q8NFF5 587 aa21.37■■□□□ 1.01
CPNE6-215ENST00000560356 IGSF1Q8N6C5 1336 aa21.36■■□□□ 1.01
CPNE6-215ENST00000560356 NEUROD1Q13562 356 aa21.36■■□□□ 1.01
CPNE6-215ENST00000560356 COG3Q96JB2 828 aa21.36■■□□□ 1.01
CPNE6-215ENST00000560356 CARD11Q9BXL7 1154 aa21.36■■□□□ 1.01
CPNE6-215ENST00000560356 WWC3Q9ULE0 1092 aa21.36■■□□□ 1.01
CPNE6-215ENST00000560356 CGNL1Q0VF96 1302 aa21.34■■□□□ 1.01
CPNE6-215ENST00000560356 FBLN1P23142 703 aa21.34■■□□□ 1.01
CPNE6-215ENST00000560356 USHBP1Q8N6Y0 703 aa21.34■■□□□ 1.01
CPNE6-215ENST00000560356 SMG6Q86US8 1419 aaKnown RBP21.34■■□□□ 1.01
CPNE6-215ENST00000560356 PKD1L3Q7Z443 1732 aa21.33■■□□□ 1.01
CPNE6-215ENST00000560356 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1.01
CPNE6-215ENST00000560356 MAP2P11137 1827 aaKnown RBP21.32■■□□□ 1
CPNE6-215ENST00000560356 HMGB2P26583 209 aaKnown RBP21.32■■□□□ 1
CPNE6-215ENST00000560356 NBPF6Q5VWK0 638 aa21.32■■□□□ 1
CPNE6-215ENST00000560356 RAPGEF4Q8WZA2 1011 aa21.32■■□□□ 1
CPNE6-215ENST00000560356 AK7Q96M32 723 aa21.32■■□□□ 1
CPNE6-215ENST00000560356 NBPF4Q96M43 638 aa21.32■■□□□ 1
CPNE6-215ENST00000560356 KIF20BQ96Q89 1820 aa21.32■■□□□ 1
CPNE6-215ENST00000560356 KIF13BQ9NQT8 1826 aa21.32■■□□□ 1
CPNE6-215ENST00000560356 PCDH11XQ9BZA7 1347 aa21.31■■□□□ 1
CPNE6-215ENST00000560356 PCDH11YQ9BZA8 1340 aa21.31■■□□□ 1
CPNE6-215ENST00000560356 NSD3Q9BZ95 1437 aa21.31■■□□□ 1
CPNE6-215ENST00000560356 KIF3CO14782 793 aa21.31■■□□□ 1
CPNE6-215ENST00000560356 KIAA1551Q9HCM1 1747 aa21.31■■□□□ 1
CPNE6-215ENST00000560356 AMIGO3Q86WK7 504 aa21.3■■□□□ 1
CPNE6-215ENST00000560356 PUS7Q96PZ0 661 aaKnown RBP21.3■■□□□ 1
CPNE6-215ENST00000560356 N4BP2Q86UW6 1770 aaPredicted RBP21.29■■□□□ 1
CPNE6-215ENST00000560356 PHF14O94880 888 aa21.29■■□□□ 1
CPNE6-215ENST00000560356 TATP17735 454 aaPredicted RBP21.29■■□□□ 1
CPNE6-215ENST00000560356 RRS1Q15050 365 aaKnown RBP21.29■■□□□ 1
CPNE6-215ENST00000560356 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
CPNE6-215ENST00000560356 WDR90Q96KV7 1748 aa21.28■■□□□ 1
CPNE6-215ENST00000560356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.26■□□□□ 0.99
CPNE6-215ENST00000560356 APLP1P51693 650 aa21.26■□□□□ 0.99
CPNE6-215ENST00000560356 SMIM5Q71RC9 77 aa21.26■□□□□ 0.99
CPNE6-215ENST00000560356 SMARCC1Q92922 1105 aaPredicted RBP21.25■□□□□ 0.99
CPNE6-215ENST00000560356 BRCA1P38398 1863 aaKnown RBP21.24■□□□□ 0.99
CPNE6-215ENST00000560356 CYP27B1O15528 508 aa21.23■□□□□ 0.99
CPNE6-215ENST00000560356 SSFA2P28290 1259 aa21.23■□□□□ 0.99
CPNE6-215ENST00000560356 PXDNLA1KZ92 1463 aa21.22■□□□□ 0.99
CPNE6-215ENST00000560356 INSRP06213 1382 aa21.22■□□□□ 0.99
CPNE6-215ENST00000560356 FLT4P35916 1363 aa21.21■□□□□ 0.99
CPNE6-215ENST00000560356 LINC00116Q8NCU8 138 aa21.2■□□□□ 0.98
CPNE6-215ENST00000560356 GGNBP2Q9H3C7 697 aa21.2■□□□□ 0.98
CPNE6-215ENST00000560356 HSP90AB2PQ58FF8 381 aa21.19■□□□□ 0.98
CPNE6-215ENST00000560356 PIGBQ92521 554 aa21.19■□□□□ 0.98
CPNE6-215ENST00000560356 TESK2Q96S53 571 aa21.19■□□□□ 0.98
CPNE6-215ENST00000560356 ARFGEF1Q9Y6D6 1849 aa21.18■□□□□ 0.98
CPNE6-215ENST00000560356 TOMM70O94826 608 aa21.18■□□□□ 0.98
CPNE6-215ENST00000560356 ANKRD26Q9UPS8 1709 aa21.18■□□□□ 0.98
CPNE6-215ENST00000560356 LOC102724428A0A0B4J2F2 783 aa21.17■□□□□ 0.98
CPNE6-215ENST00000560356 FYB1O15117 783 aa21.17■□□□□ 0.98
CPNE6-215ENST00000560356 GNPATO15228 680 aa21.17■□□□□ 0.98
CPNE6-215ENST00000560356 SIK1P57059 783 aa21.17■□□□□ 0.98
CPNE6-215ENST00000560356 DNAJC5GQ8N7S2 189 aa21.17■□□□□ 0.98
CPNE6-215ENST00000560356 C4AP0C0L4 1744 aa21.16■□□□□ 0.98
CPNE6-215ENST00000560356 C10orf71Q711Q0 1435 aa21.16■□□□□ 0.98
CPNE6-215ENST00000560356 KIF24Q5T7B8 1368 aa21.16■□□□□ 0.98
CPNE6-215ENST00000560356 MMP10P09238 476 aa21.16■□□□□ 0.98
CPNE6-215ENST00000560356 NCAPD2Q15021 1401 aa21.15■□□□□ 0.98
CPNE6-215ENST00000560356 BCS1LQ9Y276 419 aa21.15■□□□□ 0.98
CPNE6-215ENST00000560356 COL5A3P25940 1745 aaPredicted RBP21.15■□□□□ 0.98
CPNE6-215ENST00000560356 ST20-MTHFSA0A0A6YYL1 179 aa21.14■□□□□ 0.97
CPNE6-215ENST00000560356 NMRK2Q9NPI5 230 aa21.14■□□□□ 0.97
CPNE6-215ENST00000560356 ITPK1Q13572 414 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms