RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
CARMIL3-203ENST00000560349 C19orf44Q9H6X5 657 aa17.92■□□□□ 0.46
CARMIL3-203ENST00000560349 ZBTB47Q9UFB7 747 aaPredicted RBP17.92■□□□□ 0.46
CARMIL3-203ENST00000560349 GCP02774 474 aa17.91■□□□□ 0.46
CARMIL3-203ENST00000560349 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
CARMIL3-203ENST00000560349 LTN1O94822 1766 aa17.91■□□□□ 0.46
CARMIL3-203ENST00000560349 C8orf34Q49A92 452 aa17.91■□□□□ 0.46
CARMIL3-203ENST00000560349 NECTIN2Q92692 538 aa17.91■□□□□ 0.46
CARMIL3-203ENST00000560349 PDZRN3Q9UPQ7 1066 aa17.91■□□□□ 0.46
CARMIL3-203ENST00000560349 NWD1Q149M9 1564 aa17.9■□□□□ 0.46
CARMIL3-203ENST00000560349 CRB1P82279 1406 aa17.9■□□□□ 0.46
CARMIL3-203ENST00000560349 C1orf167Q5SNV9 1468 aa17.9■□□□□ 0.46
CARMIL3-203ENST00000560349 ATF3P18847 181 aa17.9■□□□□ 0.46
CARMIL3-203ENST00000560349 ZC3H6P61129 1189 aaKnown RBP17.9■□□□□ 0.46
CARMIL3-203ENST00000560349 IP6K1Q92551 441 aa17.9■□□□□ 0.46
CARMIL3-203ENST00000560349 NFAT5O94916 1531 aa17.89■□□□□ 0.45
CARMIL3-203ENST00000560349 RWDD1Q9H446 243 aaPredicted RBP17.89■□□□□ 0.45
CARMIL3-203ENST00000560349 ZBTB40Q9NUA8 1239 aa17.89■□□□□ 0.45
CARMIL3-203ENST00000560349 GAS2L2Q8NHY3 880 aa17.88■□□□□ 0.45
CARMIL3-203ENST00000560349 CABLES1Q8TDN4 633 aa17.88■□□□□ 0.45
CARMIL3-203ENST00000560349 STRCP1A6NGW2 1772 aa17.88■□□□□ 0.45
CARMIL3-203ENST00000560349 AXIN2Q9Y2T1 843 aa17.88■□□□□ 0.45
CARMIL3-203ENST00000560349 FAM161AQ3B820 660 aa17.87■□□□□ 0.45
CARMIL3-203ENST00000560349 GNAT3A8MTJ3 354 aa17.86■□□□□ 0.45
CARMIL3-203ENST00000560349 IL17REQ8NFR9 667 aa17.86■□□□□ 0.45
CARMIL3-203ENST00000560349 KCNH5Q8NCM2 988 aa17.86■□□□□ 0.45
CARMIL3-203ENST00000560349 ZNF428Q96B54 188 aa17.86■□□□□ 0.45
CARMIL3-203ENST00000560349 MSH6P52701 1360 aa17.85■□□□□ 0.45
CARMIL3-203ENST00000560349 KDM4FA0A1W2PPD8 638 aa17.85■□□□□ 0.45
CARMIL3-203ENST00000560349 ARHGEF25Q86VW2 580 aa17.84■□□□□ 0.45
CARMIL3-203ENST00000560349 RGPD2P0DJD1 1756 aa17.84■□□□□ 0.45
CARMIL3-203ENST00000560349 ZBTB7BO15156 539 aaPredicted RBP17.84■□□□□ 0.45
CARMIL3-203ENST00000560349 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
CARMIL3-203ENST00000560349 G2E3Q7L622 706 aa17.84■□□□□ 0.45
CARMIL3-203ENST00000560349 RTL1A6NKG5 1358 aa17.83■□□□□ 0.45
CARMIL3-203ENST00000560349 BRPF1P55201 1214 aaPredicted RBP17.83■□□□□ 0.44
CARMIL3-203ENST00000560349 AAMPQ13685 434 aa17.83■□□□□ 0.44
CARMIL3-203ENST00000560349 ANKRD24Q8TF21 1146 aa17.83■□□□□ 0.44
CARMIL3-203ENST00000560349 LGR6Q9HBX8 967 aa17.83■□□□□ 0.44
CARMIL3-203ENST00000560349 KIF24Q5T7B8 1368 aa17.83■□□□□ 0.44
CARMIL3-203ENST00000560349 ABCC4O15439 1325 aa17.83■□□□□ 0.44
CARMIL3-203ENST00000560349 MST1RQ04912 1400 aa17.83■□□□□ 0.44
CARMIL3-203ENST00000560349 USP54Q70EL1 1684 aa17.83■□□□□ 0.44
CARMIL3-203ENST00000560349 MAP3K5Q99683 1374 aa17.82■□□□□ 0.44
CARMIL3-203ENST00000560349 SEC24BO95487 1268 aa17.82■□□□□ 0.44
CARMIL3-203ENST00000560349 F6X3S4 739 aa17.82■□□□□ 0.44
CARMIL3-203ENST00000560349 CHRNA2Q15822 529 aa17.8■□□□□ 0.44
CARMIL3-203ENST00000560349 MPRIPQ6WCQ1 1025 aa17.8■□□□□ 0.44
CARMIL3-203ENST00000560349 ARHGAP45Q92619 1136 aa17.8■□□□□ 0.44
CARMIL3-203ENST00000560349 SLC4A10Q6U841 1118 aa17.8■□□□□ 0.44
CARMIL3-203ENST00000560349 ZNF335Q9H4Z2 1342 aaPredicted RBP17.8■□□□□ 0.44
CARMIL3-203ENST00000560349 HDAC1Q13547 482 aaPredicted RBP17.79■□□□□ 0.44
CARMIL3-203ENST00000560349 API5Q9BZZ5 524 aaKnown RBP17.79■□□□□ 0.44
CARMIL3-203ENST00000560349 LNPKQ9C0E8 428 aa17.79■□□□□ 0.44
CARMIL3-203ENST00000560349 ZNF530Q6P9A1 599 aaPredicted RBP17.79■□□□□ 0.44
CARMIL3-203ENST00000560349 KIAA0232Q92628 1395 aa17.78■□□□□ 0.44
CARMIL3-203ENST00000560349 SLC4A3P48751 1232 aa17.78■□□□□ 0.44
CARMIL3-203ENST00000560349 TRPM3Q9HCF6 1732 aaPredicted RBP17.78■□□□□ 0.44
CARMIL3-203ENST00000560349 RGS12O14924 1447 aa17.78■□□□□ 0.44
CARMIL3-203ENST00000560349 SIRT2Q8IXJ6 389 aa17.78■□□□□ 0.44
CARMIL3-203ENST00000560349 USP19O94966 1318 aa17.78■□□□□ 0.44
CARMIL3-203ENST00000560349 KCNQ3O43525 872 aa17.77■□□□□ 0.44
CARMIL3-203ENST00000560349 PXDNQ92626 1479 aa17.76■□□□□ 0.43
CARMIL3-203ENST00000560349 CADPS2Q86UW7 1296 aa17.76■□□□□ 0.43
CARMIL3-203ENST00000560349 TAF7Q15545 349 aaPredicted RBP17.75■□□□□ 0.43
CARMIL3-203ENST00000560349 SLIT3O75094 1523 aa17.75■□□□□ 0.43
CARMIL3-203ENST00000560349 MED1Q15648 1581 aaPredicted RBP17.75■□□□□ 0.43
CARMIL3-203ENST00000560349 SMC5Q8IY18 1101 aa17.75■□□□□ 0.43
CARMIL3-203ENST00000560349 MEIS3Q99687 375 aa17.75■□□□□ 0.43
CARMIL3-203ENST00000560349 NLRP2Q9NX02 1062 aa17.75■□□□□ 0.43
CARMIL3-203ENST00000560349 EIF2S2P20042 333 aaKnown RBP17.75■□□□□ 0.43
CARMIL3-203ENST00000560349 LMTK3Q96Q04 1460 aa17.75■□□□□ 0.43
CARMIL3-203ENST00000560349 RGPD5Q99666 1765 aa17.74■□□□□ 0.43
CARMIL3-203ENST00000560349 ANKRD45Q5TZF3 282 aa17.74■□□□□ 0.43
CARMIL3-203ENST00000560349 ERBB3P21860 1342 aa17.73■□□□□ 0.43
CARMIL3-203ENST00000560349 APBB1O00213 710 aa17.73■□□□□ 0.43
CARMIL3-203ENST00000560349 HTATSF1O43719 755 aaKnown RBP17.73■□□□□ 0.43
CARMIL3-203ENST00000560349 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
CARMIL3-203ENST00000560349 STK31Q9BXU1 1019 aa17.73■□□□□ 0.43
CARMIL3-203ENST00000560349 NPHP3Q7Z494 1330 aa17.72■□□□□ 0.43
CARMIL3-203ENST00000560349 ANXA1P04083 346 aa17.72■□□□□ 0.43
CARMIL3-203ENST00000560349 FKBP5Q13451 457 aaPredicted RBP17.72■□□□□ 0.43
CARMIL3-203ENST00000560349 KIF1AQ12756 1690 aa17.72■□□□□ 0.43
CARMIL3-203ENST00000560349 LRRC37A3O60309 1634 aa17.72■□□□□ 0.43
CARMIL3-203ENST00000560349 CSB-PGBD3P0DP91 1061 aa17.72■□□□□ 0.43
CARMIL3-203ENST00000560349 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
CARMIL3-203ENST00000560349 BRINP3Q76B58 766 aa17.72■□□□□ 0.43
CARMIL3-203ENST00000560349 TEFQ10587 303 aa17.71■□□□□ 0.43
CARMIL3-203ENST00000560349 INTS3Q68E01 1043 aaKnown RBP17.71■□□□□ 0.43
CARMIL3-203ENST00000560349 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
CARMIL3-203ENST00000560349 C1orf141Q5JVX7 400 aa17.71■□□□□ 0.43
CARMIL3-203ENST00000560349 UBE2Q2Q8WVN8 375 aa17.71■□□□□ 0.43
CARMIL3-203ENST00000560349 FLIIQ13045 1269 aa17.7■□□□□ 0.42
CARMIL3-203ENST00000560349 HDGFL1Q5TGJ6 251 aa17.7■□□□□ 0.42
CARMIL3-203ENST00000560349 PHAXQ9H814 394 aaKnown RBP17.7■□□□□ 0.42
CARMIL3-203ENST00000560349 NUCB1Q02818 461 aa17.7■□□□□ 0.42
CARMIL3-203ENST00000560349 CHD1LQ86WJ1 897 aa17.7■□□□□ 0.42
CARMIL3-203ENST00000560349 PTPRCP08575 1304 aa17.69■□□□□ 0.42
CARMIL3-203ENST00000560349 ALS2Q96Q42 1657 aa17.69■□□□□ 0.42
CARMIL3-203ENST00000560349 CEMIPQ8WUJ3 1361 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms