RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 BTAF1O14981 1849 aa28.5■■■□□ 2.15
ETFA-213ENST00000560309 RGPD2P0DJD1 1756 aa28.49■■■□□ 2.15
ETFA-213ENST00000560309 HMGB2P26583 209 aaKnown RBP28.48■■■□□ 2.15
ETFA-213ENST00000560309 MEGF6O75095 1541 aa28.47■■■□□ 2.15
ETFA-213ENST00000560309 CASZ1Q86V15 1759 aa28.47■■■□□ 2.15
ETFA-213ENST00000560309 PRIM1P49642 420 aaKnown RBP28.46■■■□□ 2.15
ETFA-213ENST00000560309 DCAF8L1A6NGE4 600 aa28.45■■■□□ 2.14
ETFA-213ENST00000560309 HSPA5P11021 654 aaKnown RBP28.45■■■□□ 2.14
ETFA-213ENST00000560309 SYTL4Q96C24 671 aaPredicted RBP28.45■■■□□ 2.14
ETFA-213ENST00000560309 POLR3GLQ9BT43 218 aa28.45■■■□□ 2.14
ETFA-213ENST00000560309 WASHC2AQ641Q2 1341 aa28.44■■■□□ 2.14
ETFA-213ENST00000560309 USHBP1Q8N6Y0 703 aa28.43■■■□□ 2.14
ETFA-213ENST00000560309 MTFR1LQ9H019 292 aa28.43■■■□□ 2.14
ETFA-213ENST00000560309 EMILIN1Q9Y6C2 1016 aa28.43■■■□□ 2.14
ETFA-213ENST00000560309 PCDH11XQ9BZA7 1347 aa28.43■■■□□ 2.14
ETFA-213ENST00000560309 PCDH11YQ9BZA8 1340 aa28.43■■■□□ 2.14
ETFA-213ENST00000560309 PPM1GO15355 546 aaPredicted RBP28.41■■■□□ 2.14
ETFA-213ENST00000560309 ZBTB7AO95365 584 aa28.41■■■□□ 2.14
ETFA-213ENST00000560309 PDGFDQ9GZP0 370 aaPredicted RBP28.4■■■□□ 2.14
ETFA-213ENST00000560309 LRRC4BQ9NT99 713 aa28.4■■■□□ 2.14
ETFA-213ENST00000560309 MAP2P11137 1827 aaKnown RBP28.39■■■□□ 2.14
ETFA-213ENST00000560309 SHANK3Q9BYB0 1731 aa28.39■■■□□ 2.14
ETFA-213ENST00000560309 POLKQ9UBT6 870 aa28.38■■■□□ 2.13
ETFA-213ENST00000560309 PAPPAQ13219 1627 aa28.38■■■□□ 2.13
ETFA-213ENST00000560309 PTGER2P43116 358 aa28.37■■■□□ 2.13
ETFA-213ENST00000560309 SLC16A10Q8TF71 515 aa28.37■■■□□ 2.13
ETFA-213ENST00000560309 AKT1S1Q96B36 256 aa28.37■■■□□ 2.13
ETFA-213ENST00000560309 PANK3Q9H999 370 aa28.37■■■□□ 2.13
ETFA-213ENST00000560309 ATF5Q9Y2D1 282 aaPredicted RBP28.37■■■□□ 2.13
ETFA-213ENST00000560309 NSD2O96028 1365 aa28.37■■■□□ 2.13
ETFA-213ENST00000560309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.36■■■□□ 2.131e-9■□□□□ 10.4
ETFA-213ENST00000560309 DOT1LQ8TEK3 1739 aa28.35■■■□□ 2.13
ETFA-213ENST00000560309 ANKRD26Q9UPS8 1709 aa28.35■■■□□ 2.13
ETFA-213ENST00000560309 SPG7Q9UQ90 795 aa28.35■■■□□ 2.13
ETFA-213ENST00000560309 NCAPD2Q15021 1401 aa28.35■■■□□ 2.13
ETFA-213ENST00000560309 ZNF827Q17R98 1081 aa28.32■■■□□ 2.12
ETFA-213ENST00000560309 EYA1Q99502 592 aa28.32■■■□□ 2.12
ETFA-213ENST00000560309 CCNL1Q9UK58 526 aaPredicted RBP28.32■■■□□ 2.12
ETFA-213ENST00000560309 PLEKHG2Q9H7P9 1386 aa28.31■■■□□ 2.12
ETFA-213ENST00000560309 LY75O60449 1722 aa28.31■■■□□ 2.12
ETFA-213ENST00000560309 CYP27B1O15528 508 aa28.3■■■□□ 2.12
ETFA-213ENST00000560309 NKX1-1Q15270 411 aaPredicted RBP28.3■■■□□ 2.12
ETFA-213ENST00000560309 SGIP1Q9BQI5 828 aa28.3■■■□□ 2.12
ETFA-213ENST00000560309 TFCP2L1Q9NZI6 479 aa28.3■■■□□ 2.12
ETFA-213ENST00000560309 QSER1Q2KHR3 1735 aa28.29■■■□□ 2.12
ETFA-213ENST00000560309 SMARCC1Q92922 1105 aaPredicted RBP28.28■■■□□ 2.12
ETFA-213ENST00000560309 KNSTRNQ9Y448 316 aa28.28■■■□□ 2.12
ETFA-213ENST00000560309 TNNT2P45379 298 aaPredicted RBP28.26■■■□□ 2.11
ETFA-213ENST00000560309 MPRIPQ6WCQ1 1025 aa28.26■■■□□ 2.11
ETFA-213ENST00000560309 ARXQ96QS3 562 aa28.26■■■□□ 2.11
ETFA-213ENST00000560309 PKD1L3Q7Z443 1732 aa28.26■■■□□ 2.11
ETFA-213ENST00000560309 POLD1P28340 1107 aa28.24■■■□□ 2.11
ETFA-213ENST00000560309 EIF4A2Q14240 407 aaKnown RBP28.24■■■□□ 2.11
ETFA-213ENST00000560309 MORC1Q86VD1 984 aa28.24■■■□□ 2.11
ETFA-213ENST00000560309 IFNL2Q8IZJ0 200 aa28.24■■■□□ 2.11
ETFA-213ENST00000560309 SYT17Q9BSW7 474 aa28.24■■■□□ 2.11
ETFA-213ENST00000560309 PNPLA7Q6ZV29 1317 aa28.23■■■□□ 2.11
ETFA-213ENST00000560309 FHDC1Q9C0D6 1143 aaPredicted RBP28.22■■■□□ 2.11
ETFA-213ENST00000560309 KCNQ4P56696 695 aa28.21■■■□□ 2.11
ETFA-213ENST00000560309 FLAD1Q8NFF5 587 aa28.21■■■□□ 2.11
ETFA-213ENST00000560309 MAP3K5Q99683 1374 aa28.21■■■□□ 2.11
ETFA-213ENST00000560309 PALLDQ8WX93 1383 aa28.2■■■□□ 2.1
ETFA-213ENST00000560309 IGSF1Q8N6C5 1336 aa28.18■■■□□ 2.1
ETFA-213ENST00000560309 HSP90AB1P08238 724 aaKnown RBP28.17■■■□□ 2.1
ETFA-213ENST00000560309 PHKG2P15735 406 aa28.17■■■□□ 2.1
ETFA-213ENST00000560309 YY1P25490 414 aa28.17■■■□□ 2.1
ETFA-213ENST00000560309 PIGBQ92521 554 aa28.17■■■□□ 2.1
ETFA-213ENST00000560309 ITGB4P16144 1822 aa28.17■■■□□ 2.1
ETFA-213ENST00000560309 TMOD3Q9NYL9 352 aa28.16■■■□□ 2.1
ETFA-213ENST00000560309 AMOTQ4VCS5 1084 aa28.15■■■□□ 2.1
ETFA-213ENST00000560309 PLEKHO1Q53GL0 409 aaPredicted RBP28.15■■■□□ 2.1
ETFA-213ENST00000560309 COL24A1Q17RW2 1714 aa28.13■■■□□ 2.09
ETFA-213ENST00000560309 KIF7Q2M1P5 1343 aa28.13■■■□□ 2.09
ETFA-213ENST00000560309 COL23A1Q86Y22 540 aaPredicted RBP28.12■■■□□ 2.09
ETFA-213ENST00000560309 ERVV-2B6SEH9 535 aa28.11■■■□□ 2.09
ETFA-213ENST00000560309 MSH5O43196 834 aa28.11■■■□□ 2.09
ETFA-213ENST00000560309 AMER1Q5JTC6 1135 aaPredicted RBP28.11■■■□□ 2.09
ETFA-213ENST00000560309 TOGARAM1Q9Y4F4 1720 aa28.11■■■□□ 2.09
ETFA-213ENST00000560309 C5P01031 1676 aa28.1■■■□□ 2.09
ETFA-213ENST00000560309 DCAF5Q96JK2 942 aa28.1■■■□□ 2.09
ETFA-213ENST00000560309 TUBGCP6Q96RT7 1819 aa28.1■■■□□ 2.09
ETFA-213ENST00000560309 TAF1LQ8IZX4 1826 aa28.08■■■□□ 2.09
ETFA-213ENST00000560309 LOC102724428A0A0B4J2F2 783 aa28.08■■■□□ 2.09
ETFA-213ENST00000560309 SIK1P57059 783 aa28.08■■■□□ 2.09
ETFA-213ENST00000560309 AK7Q96M32 723 aa28.08■■■□□ 2.09
ETFA-213ENST00000560309 PER1O15534 1290 aaPredicted RBP28.05■■■□□ 2.08
ETFA-213ENST00000560309 IL13P35225 146 aa28.04■■■□□ 2.08
ETFA-213ENST00000560309 C1orf141Q5JVX7 400 aa28.03■■■□□ 2.08
ETFA-213ENST00000560309 ZNF530Q6P9A1 599 aaPredicted RBP28.03■■■□□ 2.08
ETFA-213ENST00000560309 ASAP1Q9ULH1 1129 aa28.03■■■□□ 2.08
ETFA-213ENST00000560309 C4BP0C0L5 1744 aa28.02■■■□□ 2.08
ETFA-213ENST00000560309 SSFA2P28290 1259 aa28.02■■■□□ 2.08
ETFA-213ENST00000560309 ATP6V1AP38606 617 aa28.02■■■□□ 2.08
ETFA-213ENST00000560309 SULT6B1Q6IMI4 303 aa28.02■■■□□ 2.08
ETFA-213ENST00000560309 ATG3Q9NT62 314 aa28.02■■■□□ 2.08
ETFA-213ENST00000560309 KDRP35968 1356 aa28.01■■■□□ 2.07
ETFA-213ENST00000560309 KLHL34Q8N239 644 aa28.01■■■□□ 2.07
ETFA-213ENST00000560309 MTHFSP49914 203 aa28■■■□□ 2.07
ETFA-213ENST00000560309 GPR162Q16538 588 aa27.99■■■□□ 2.07
ETFA-213ENST00000560309 NPC1L1Q9UHC9 1359 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms