RNA–Protein interactions for RNA: ENST00000560240.5

COPS2-207, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-207ENST00000560240 USHBP1Q8N6Y0 703 aa10.67□□□□□ -0.7
COPS2-207ENST00000560240 BRWD3Q6RI45 1802 aa10.66□□□□□ -0.7
COPS2-207ENST00000560240 U2SURPO15042 1029 aaKnown RBP10.66□□□□□ -0.7
COPS2-207ENST00000560240 AMOTQ4VCS5 1084 aa10.66□□□□□ -0.7
COPS2-207ENST00000560240 AEBP1Q8IUX7 1158 aa10.66□□□□□ -0.7
COPS2-207ENST00000560240 RSPH6AQ9H0K4 717 aa10.66□□□□□ -0.7
COPS2-207ENST00000560240 PNNQ9H307 717 aaKnown RBP10.66□□□□□ -0.7
COPS2-207ENST00000560240 SHANK3Q9BYB0 1731 aa10.66□□□□□ -0.7
COPS2-207ENST00000560240 PCDH11XQ9BZA7 1347 aa10.65□□□□□ -0.7
COPS2-207ENST00000560240 PCDH11YQ9BZA8 1340 aa10.65□□□□□ -0.7
COPS2-207ENST00000560240 U2AF1L5P0DN76 240 aaPredicted RBP10.65□□□□□ -0.7
COPS2-207ENST00000560240 U2AF1Q01081 240 aaKnown RBP eCLIP10.65□□□□□ -0.7
COPS2-207ENST00000560240 KRT27Q7Z3Y8 459 aa10.65□□□□□ -0.7
COPS2-207ENST00000560240 ZCRB1Q8TBF4 217 aaKnown RBP10.65□□□□□ -0.7
COPS2-207ENST00000560240 SPG7Q9UQ90 795 aa10.65□□□□□ -0.7
COPS2-207ENST00000560240 HMOX1P09601 288 aa10.64□□□□□ -0.71
COPS2-207ENST00000560240 PDE3BQ13370 1112 aa10.64□□□□□ -0.71
COPS2-207ENST00000560240 WDR43Q15061 677 aaKnown RBP eCLIP10.64□□□□□ -0.71
COPS2-207ENST00000560240 PLEKHO1Q53GL0 409 aaPredicted RBP10.64□□□□□ -0.71
COPS2-207ENST00000560240 PNISRQ8TF01 805 aaKnown RBP10.64□□□□□ -0.71
COPS2-207ENST00000560240 A0A0G2JS52 829 aa10.63□□□□□ -0.71
COPS2-207ENST00000560240 MYT1Q01538 1121 aa10.63□□□□□ -0.71
COPS2-207ENST00000560240 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
COPS2-207ENST00000560240 PLEKHF1Q96S99 279 aa10.63□□□□□ -0.71
COPS2-207ENST00000560240 MRS2Q9HD23 443 aa10.63□□□□□ -0.71
COPS2-207ENST00000560240 CYP27B1O15528 508 aa10.62□□□□□ -0.71
COPS2-207ENST00000560240 PRKAR2BP31323 418 aa10.62□□□□□ -0.71
COPS2-207ENST00000560240 CCDC184Q52MB2 194 aa10.62□□□□□ -0.71
COPS2-207ENST00000560240 FAM196AQ6ZSG2 479 aa10.62□□□□□ -0.71
COPS2-207ENST00000560240 MARCH10Q8NA82 808 aaPredicted RBP10.62□□□□□ -0.71
COPS2-207ENST00000560240 HSP90AB1P08238 724 aaKnown RBP10.61□□□□□ -0.71
COPS2-207ENST00000560240 IFNL2Q8IZJ0 200 aa10.61□□□□□ -0.71
COPS2-207ENST00000560240 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
COPS2-207ENST00000560240 ADAMTS8Q9UP79 889 aa10.61□□□□□ -0.71
COPS2-207ENST00000560240 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
COPS2-207ENST00000560240 NEFMP07197 916 aa10.6□□□□□ -0.71
COPS2-207ENST00000560240 PHKG2P15735 406 aa10.6□□□□□ -0.71
COPS2-207ENST00000560240 AKAP4Q5JQC9 854 aa10.6□□□□□ -0.71
COPS2-207ENST00000560240 MIER1Q8N108 512 aa10.6□□□□□ -0.71
COPS2-207ENST00000560240 MTHFSDQ2M296 383 aaKnown RBP10.59□□□□□ -0.71
COPS2-207ENST00000560240 NCBP3Q53F19 620 aaKnown RBP10.59□□□□□ -0.71
COPS2-207ENST00000560240 C1orf141Q5JVX7 400 aa10.59□□□□□ -0.71
COPS2-207ENST00000560240 ZNF530Q6P9A1 599 aaPredicted RBP10.59□□□□□ -0.71
COPS2-207ENST00000560240 ILDR2Q71H61 639 aa10.59□□□□□ -0.71
COPS2-207ENST00000560240 RUNDC1Q96C34 613 aa10.59□□□□□ -0.71
COPS2-207ENST00000560240 DCAF5Q96JK2 942 aa10.59□□□□□ -0.71
COPS2-207ENST00000560240 PHACTR3Q96KR7 559 aa10.59□□□□□ -0.71
COPS2-207ENST00000560240 MAPK8IP3Q9UPT6 1336 aa10.58□□□□□ -0.71
COPS2-207ENST00000560240 SBF2Q86WG5 1849 aa10.58□□□□□ -0.72
COPS2-207ENST00000560240 MAP3K5Q99683 1374 aa10.58□□□□□ -0.72
COPS2-207ENST00000560240 HTATSF1O43719 755 aaKnown RBP10.58□□□□□ -0.72
COPS2-207ENST00000560240 CCDC125Q86Z20 511 aa10.58□□□□□ -0.72
COPS2-207ENST00000560240 DDX54Q8TDD1 881 aaKnown RBP10.58□□□□□ -0.72
COPS2-207ENST00000560240 NHSQ6T4R5 1651 aa10.57□□□□□ -0.72
COPS2-207ENST00000560240 MRC1P22897 1456 aa10.57□□□□□ -0.72
COPS2-207ENST00000560240 ERVV-2B6SEH9 535 aa10.57□□□□□ -0.72
COPS2-207ENST00000560240 NFE2L2Q16236 605 aa10.57□□□□□ -0.72
COPS2-207ENST00000560240 NGEFQ8N5V2 710 aa10.57□□□□□ -0.72
COPS2-207ENST00000560240 KDM6AO15550 1401 aaPredicted RBP10.57□□□□□ -0.72
COPS2-207ENST00000560240 SCN11AQ9UI33 1791 aa10.57□□□□□ -0.72
COPS2-207ENST00000560240 DOT1LQ8TEK3 1739 aa10.56□□□□□ -0.72
COPS2-207ENST00000560240 TOGARAM1Q9Y4F4 1720 aa10.56□□□□□ -0.72
COPS2-207ENST00000560240 CEMIPQ8WUJ3 1361 aa10.56□□□□□ -0.72
COPS2-207ENST00000560240 GNAT3A8MTJ3 354 aa10.56□□□□□ -0.72
COPS2-207ENST00000560240 BCL11BQ9C0K0 894 aaPredicted RBP10.56□□□□□ -0.72
COPS2-207ENST00000560240 TMPOP42166 694 aaKnown RBP10.55□□□□□ -0.72
COPS2-207ENST00000560240 FAM182BQ5T319 152 aa10.55□□□□□ -0.72
COPS2-207ENST00000560240 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
COPS2-207ENST00000560240 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
COPS2-207ENST00000560240 RGPD4Q7Z3J3 1758 aa10.54□□□□□ -0.72
COPS2-207ENST00000560240 DLG5Q8TDM6 1919 aa10.54□□□□□ -0.72
COPS2-207ENST00000560240 LMOD3Q0VAK6 560 aa10.54□□□□□ -0.72
COPS2-207ENST00000560240 ITGB4P16144 1822 aa10.54□□□□□ -0.72
COPS2-207ENST00000560240 VIRMAQ69YN4 1812 aaKnown RBP10.54□□□□□ -0.72
COPS2-207ENST00000560240 RNMTO43148 476 aaKnown RBP10.53□□□□□ -0.72
COPS2-207ENST00000560240 CCDC27Q2M243 656 aa10.53□□□□□ -0.72
COPS2-207ENST00000560240 CCDC146Q8IYE0 955 aa10.53□□□□□ -0.72
COPS2-207ENST00000560240 IL17REQ8NFR9 667 aa10.53□□□□□ -0.72
COPS2-207ENST00000560240 RTF1Q92541 710 aaKnown RBP10.53□□□□□ -0.72
COPS2-207ENST00000560240 SIPA1L3O60292 1781 aaPredicted RBP10.52□□□□□ -0.72
COPS2-207ENST00000560240 PLSCR1O15162 318 aa10.52□□□□□ -0.73
COPS2-207ENST00000560240 PRIM1P49642 420 aaKnown RBP10.52□□□□□ -0.73
COPS2-207ENST00000560240 RIPK4P57078 832 aa10.52□□□□□ -0.73
COPS2-207ENST00000560240 MPRIPQ6WCQ1 1025 aa10.52□□□□□ -0.73
COPS2-207ENST00000560240 FAM9BQ8IZU0 186 aa10.52□□□□□ -0.73
COPS2-207ENST00000560240 UPF1Q92900 1129 aaKnown RBP eCLIP10.52□□□□□ -0.732e-6■■■■■ 33.2
COPS2-207ENST00000560240 SLC52A2Q9HAB3 445 aa10.52□□□□□ -0.73
COPS2-207ENST00000560240 BTAF1O14981 1849 aa10.51□□□□□ -0.73
COPS2-207ENST00000560240 APAF1O14727 1248 aa10.51□□□□□ -0.73
COPS2-207ENST00000560240 KCNQ2O43526 872 aa10.51□□□□□ -0.73
COPS2-207ENST00000560240 TRIM37O94972 964 aa10.51□□□□□ -0.73
COPS2-207ENST00000560240 LGR6Q9HBX8 967 aa10.51□□□□□ -0.73
COPS2-207ENST00000560240 BABAM1Q9NWV8 329 aa10.51□□□□□ -0.73
COPS2-207ENST00000560240 TMOD3Q9NYL9 352 aa10.51□□□□□ -0.73
COPS2-207ENST00000560240 HMGB2P26583 209 aaKnown RBP10.5□□□□□ -0.73
COPS2-207ENST00000560240 CABP4P57796 275 aa10.5□□□□□ -0.73
COPS2-207ENST00000560240 TEFQ10587 303 aa10.5□□□□□ -0.73
COPS2-207ENST00000560240 SF3B2Q13435 895 aaKnown RBP10.5□□□□□ -0.73
COPS2-207ENST00000560240 PIGBQ92521 554 aa10.5□□□□□ -0.73
COPS2-207ENST00000560240 ACSBG1Q96GR2 724 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms