RNA–Protein interactions for RNA: ENST00000560097.1

AC104041.1-202, humanhuman

TSL 4 BASIC

Gene AC104041.1, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-202ENST00000560097 PLSCR1O15162 318 aa16.27■□□□□ 0.2
AC104041.1-202ENST00000560097 AMPHP49418 695 aa16.26■□□□□ 0.19
AC104041.1-202ENST00000560097 EIF4G2P78344 907 aaKnown RBP eCLIP16.26■□□□□ 0.19
AC104041.1-202ENST00000560097 CDCA8Q53HL2 280 aa16.25■□□□□ 0.19
AC104041.1-202ENST00000560097 LY75O60449 1722 aa16.25■□□□□ 0.19
AC104041.1-202ENST00000560097 FLT4P35916 1363 aa16.25■□□□□ 0.19
AC104041.1-202ENST00000560097 LRRC4BQ9NT99 713 aa16.23■□□□□ 0.19
AC104041.1-202ENST00000560097 POLKQ9UBT6 870 aa16.23■□□□□ 0.19
AC104041.1-202ENST00000560097 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
AC104041.1-202ENST00000560097 SMG6Q86US8 1419 aaKnown RBP16.22■□□□□ 0.19
AC104041.1-202ENST00000560097 TXNRD1Q16881 649 aa16.22■□□□□ 0.19
AC104041.1-202ENST00000560097 PANK3Q9H999 370 aa16.22■□□□□ 0.19
AC104041.1-202ENST00000560097 KIF24Q5T7B8 1368 aa16.22■□□□□ 0.19
AC104041.1-202ENST00000560097 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.19
AC104041.1-202ENST00000560097 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
AC104041.1-202ENST00000560097 ITGB4P16144 1822 aa16.21■□□□□ 0.19
AC104041.1-202ENST00000560097 DDX54Q8TDD1 881 aaKnown RBP16.2■□□□□ 0.18
AC104041.1-202ENST00000560097 ZNF827Q17R98 1081 aa16.19■□□□□ 0.18
AC104041.1-202ENST00000560097 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
AC104041.1-202ENST00000560097 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
AC104041.1-202ENST00000560097 CYP27B1O15528 508 aa16.18■□□□□ 0.18
AC104041.1-202ENST00000560097 KCNQ4P56696 695 aa16.18■□□□□ 0.18
AC104041.1-202ENST00000560097 EYA1Q99502 592 aa16.18■□□□□ 0.18
AC104041.1-202ENST00000560097 ZCRB1Q8TBF4 217 aaKnown RBP16.17■□□□□ 0.18
AC104041.1-202ENST00000560097 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
AC104041.1-202ENST00000560097 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
AC104041.1-202ENST00000560097 TNNT2P45379 298 aaPredicted RBP16.16■□□□□ 0.18
AC104041.1-202ENST00000560097 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
AC104041.1-202ENST00000560097 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
AC104041.1-202ENST00000560097 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
AC104041.1-202ENST00000560097 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
AC104041.1-202ENST00000560097 PER1O15534 1290 aaPredicted RBP16.14■□□□□ 0.17
AC104041.1-202ENST00000560097 PPM1GO15355 546 aaPredicted RBP16.13■□□□□ 0.17
AC104041.1-202ENST00000560097 MSH5O43196 834 aa16.13■□□□□ 0.17
AC104041.1-202ENST00000560097 PTGER2P43116 358 aa16.13■□□□□ 0.17
AC104041.1-202ENST00000560097 SLC15A2Q16348 729 aa16.13■□□□□ 0.17
AC104041.1-202ENST00000560097 SGIP1Q9BQI5 828 aa16.13■□□□□ 0.17
AC104041.1-202ENST00000560097 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
AC104041.1-202ENST00000560097 NBPF14Q5TI25 921 aa16.11■□□□□ 0.17
AC104041.1-202ENST00000560097 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
AC104041.1-202ENST00000560097 C5P01031 1676 aa16.11■□□□□ 0.17
AC104041.1-202ENST00000560097 ZBTB7AO95365 584 aa16.1■□□□□ 0.17
AC104041.1-202ENST00000560097 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
AC104041.1-202ENST00000560097 AMIGO3Q86WK7 504 aa16.1■□□□□ 0.17
AC104041.1-202ENST00000560097 AEBP1Q8IUX7 1158 aa16.09■□□□□ 0.17
AC104041.1-202ENST00000560097 RAPGEF4Q8WZA2 1011 aa16.09■□□□□ 0.17
AC104041.1-202ENST00000560097 COL3A1P02461 1466 aaPredicted RBP16.09■□□□□ 0.17
AC104041.1-202ENST00000560097 PCDH11XQ9BZA7 1347 aa16.08■□□□□ 0.16
AC104041.1-202ENST00000560097 PCDH11YQ9BZA8 1340 aa16.08■□□□□ 0.16
AC104041.1-202ENST00000560097 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
AC104041.1-202ENST00000560097 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
AC104041.1-202ENST00000560097 PNPLA7Q6ZV29 1317 aa16.07■□□□□ 0.16
AC104041.1-202ENST00000560097 KDM6AO15550 1401 aaPredicted RBP16.07■□□□□ 0.16
AC104041.1-202ENST00000560097 ATF5Q9Y2D1 282 aaPredicted RBP16.06■□□□□ 0.16
AC104041.1-202ENST00000560097 PIGBQ92521 554 aa16.05■□□□□ 0.16
AC104041.1-202ENST00000560097 SPON1Q9HCB6 807 aa16.05■□□□□ 0.16
AC104041.1-202ENST00000560097 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
AC104041.1-202ENST00000560097 UBR3Q6ZT12 1888 aa16.05■□□□□ 0.16
AC104041.1-202ENST00000560097 PHKG2P15735 406 aa16.04■□□□□ 0.16
AC104041.1-202ENST00000560097 IL13P35225 146 aa16.04■□□□□ 0.16
AC104041.1-202ENST00000560097 SMIM5Q71RC9 77 aa16.04■□□□□ 0.16
AC104041.1-202ENST00000560097 C4BP0C0L5 1744 aa16.04■□□□□ 0.16
AC104041.1-202ENST00000560097 UTRNP46939 3433 aa16.03■□□□□ 0.16
AC104041.1-202ENST00000560097 KDRP35968 1356 aa16.03■□□□□ 0.16
AC104041.1-202ENST00000560097 PALLDQ8WX93 1383 aa16.03■□□□□ 0.16
AC104041.1-202ENST00000560097 MORC1Q86VD1 984 aa16.03■□□□□ 0.16
AC104041.1-202ENST00000560097 VIRMAQ69YN4 1812 aaKnown RBP16.03■□□□□ 0.16
AC104041.1-202ENST00000560097 SLC27A3Q5K4L6 730 aa16.02■□□□□ 0.16
AC104041.1-202ENST00000560097 SLC4A9Q96Q91 983 aa16.01■□□□□ 0.15
AC104041.1-202ENST00000560097 KNSTRNQ9Y448 316 aa16.01■□□□□ 0.15
AC104041.1-202ENST00000560097 ADAMTS7Q9UKP4 1686 aa16.01■□□□□ 0.15
AC104041.1-202ENST00000560097 SCN11AQ9UI33 1791 aa16■□□□□ 0.15
AC104041.1-202ENST00000560097 MPRIPQ6WCQ1 1025 aa16■□□□□ 0.15
AC104041.1-202ENST00000560097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16■□□□□ 0.15
AC104041.1-202ENST00000560097 CCNL1Q9UK58 526 aaPredicted RBP16■□□□□ 0.15
AC104041.1-202ENST00000560097 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
AC104041.1-202ENST00000560097 CC2D1BQ5T0F9 858 aaKnown RBP15.99■□□□□ 0.15
AC104041.1-202ENST00000560097 ASAP1Q9ULH1 1129 aa15.99■□□□□ 0.15
AC104041.1-202ENST00000560097 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
AC104041.1-202ENST00000560097 NPC1L1Q9UHC9 1359 aa15.99■□□□□ 0.15
AC104041.1-202ENST00000560097 MTHFSP49914 203 aa15.98■□□□□ 0.15
AC104041.1-202ENST00000560097 ITPK1Q13572 414 aa15.98■□□□□ 0.15
AC104041.1-202ENST00000560097 COL23A1Q86Y22 540 aaPredicted RBP15.98■□□□□ 0.15
AC104041.1-202ENST00000560097 MTFR1LQ9H019 292 aa15.98■□□□□ 0.15
AC104041.1-202ENST00000560097 MYH14Q7Z406 1995 aaKnown RBP15.98■□□□□ 0.15
AC104041.1-202ENST00000560097 GOLGB1Q14789 3259 aaKnown RBP15.97■□□□□ 0.15
AC104041.1-202ENST00000560097 TJP1Q07157 1748 aa15.97■□□□□ 0.15
AC104041.1-202ENST00000560097 LINC00116Q8NCU8 138 aa15.97■□□□□ 0.15
AC104041.1-202ENST00000560097 SPG7Q9UQ90 795 aa15.97■□□□□ 0.15
AC104041.1-202ENST00000560097 ZNF831Q5JPB2 1677 aa15.97■□□□□ 0.15
AC104041.1-202ENST00000560097 FHDC1Q9C0D6 1143 aaPredicted RBP15.96■□□□□ 0.15
AC104041.1-202ENST00000560097 ATG3Q9NT62 314 aa15.96■□□□□ 0.15
AC104041.1-202ENST00000560097 SULT6B1Q6IMI4 303 aa15.95■□□□□ 0.14
AC104041.1-202ENST00000560097 IFNL2Q8IZJ0 200 aa15.95■□□□□ 0.14
AC104041.1-202ENST00000560097 CICQ96RK0 1608 aaPredicted RBP15.94■□□□□ 0.14
AC104041.1-202ENST00000560097 MRC1P22897 1456 aa15.94■□□□□ 0.14
AC104041.1-202ENST00000560097 ZNF530Q6P9A1 599 aaPredicted RBP15.93■□□□□ 0.14
AC104041.1-202ENST00000560097 SYT17Q9BSW7 474 aa15.93■□□□□ 0.14
AC104041.1-202ENST00000560097 MAP3K5Q99683 1374 aa15.92■□□□□ 0.14
AC104041.1-202ENST00000560097 C4AP0C0L4 1744 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms