RNA–Protein interactions for RNA: ENST00000560033.5

PSMA4-217, Transcript of proteasome subunit alpha 4, humanhuman

TSL 4

Gene PSMA4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-217ENST00000560033 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
PSMA4-217ENST00000560033 ADGBQ8N7X0 1667 aa10.29□□□□□ -0.76
PSMA4-217ENST00000560033 NUTM2BA6NNL0 878 aaPredicted RBP10.29□□□□□ -0.76
PSMA4-217ENST00000560033 NUTM2EB1AL46 878 aaPredicted RBP10.29□□□□□ -0.76
PSMA4-217ENST00000560033 WNT7AO00755 349 aa10.29□□□□□ -0.76
PSMA4-217ENST00000560033 WNT7BP56706 349 aa10.29□□□□□ -0.76
PSMA4-217ENST00000560033 NUTM2DQ5VT03 806 aaPredicted RBP10.29□□□□□ -0.76
PSMA4-217ENST00000560033 NUTM2AQ8IVF1 878 aaPredicted RBP10.29□□□□□ -0.76
PSMA4-217ENST00000560033 CCDC141Q6ZP82 1450 aa10.29□□□□□ -0.76
PSMA4-217ENST00000560033 KDM6BO15054 1643 aa10.29□□□□□ -0.76
PSMA4-217ENST00000560033 KIAA1107Q9UPP5 1409 aa10.28□□□□□ -0.76
PSMA4-217ENST00000560033 CYB5RLQ6IPT4 315 aa10.28□□□□□ -0.76
PSMA4-217ENST00000560033 UNC93B1Q9H1C4 597 aa10.28□□□□□ -0.76
PSMA4-217ENST00000560033 TOR4AQ9NXH8 423 aa10.28□□□□□ -0.76
PSMA4-217ENST00000560033 SYCP2Q9BX26 1530 aa10.28□□□□□ -0.76
PSMA4-217ENST00000560033 RIMBP3CA6NJZ7 1639 aa10.27□□□□□ -0.77
PSMA4-217ENST00000560033 RIMBP3BA6NNM3 1639 aa10.27□□□□□ -0.77
PSMA4-217ENST00000560033 RIMBP3Q9UFD9 1639 aa10.27□□□□□ -0.77
PSMA4-217ENST00000560033 ARAP3Q8WWN8 1544 aa10.27□□□□□ -0.77
PSMA4-217ENST00000560033 TNFRSF10AO00220 468 aa10.26□□□□□ -0.77
PSMA4-217ENST00000560033 ABCA9Q8IUA7 1624 aa10.25□□□□□ -0.77
PSMA4-217ENST00000560033 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
PSMA4-217ENST00000560033 SIN3AQ96ST3 1273 aa10.25□□□□□ -0.77
PSMA4-217ENST00000560033 MAP10Q9P2G4 905 aa10.25□□□□□ -0.77
PSMA4-217ENST00000560033 ARHGEF12Q9NZN5 1544 aa10.24□□□□□ -0.77
PSMA4-217ENST00000560033 SH3BP2P78314 561 aa10.24□□□□□ -0.77
PSMA4-217ENST00000560033 CTDSPL2Q05D32 466 aa10.24□□□□□ -0.77
PSMA4-217ENST00000560033 FOXC1Q12948 553 aa10.24□□□□□ -0.77
PSMA4-217ENST00000560033 HELBQ8NG08 1087 aaPredicted RBP10.24□□□□□ -0.77
PSMA4-217ENST00000560033 MPHOSPH9Q99550 1183 aa10.24□□□□□ -0.77
PSMA4-217ENST00000560033 KIF15Q9NS87 1388 aa10.24□□□□□ -0.77
PSMA4-217ENST00000560033 ANKRD50Q9ULJ7 1429 aa10.24□□□□□ -0.77
PSMA4-217ENST00000560033 ABCC1P33527 1531 aa10.23□□□□□ -0.77
PSMA4-217ENST00000560033 MAST1Q9Y2H9 1570 aa10.23□□□□□ -0.77
PSMA4-217ENST00000560033 RC3H1Q5TC82 1133 aaKnown RBP10.23□□□□□ -0.77
PSMA4-217ENST00000560033 MRGPRX2Q96LB1 330 aa10.23□□□□□ -0.77
PSMA4-217ENST00000560033 FANCAO15360 1455 aa10.23□□□□□ -0.77
PSMA4-217ENST00000560033 SIAH2O43255 324 aa10.22□□□□□ -0.77
PSMA4-217ENST00000560033 BAP1Q92560 729 aa10.22□□□□□ -0.77
PSMA4-217ENST00000560033 PCMTD1Q96MG8 357 aaPredicted RBP10.22□□□□□ -0.77
PSMA4-217ENST00000560033 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
PSMA4-217ENST00000560033 TRAPPC8Q9Y2L5 1435 aa10.22□□□□□ -0.77
PSMA4-217ENST00000560033 DGAT1O75907 488 aa10.21□□□□□ -0.77
PSMA4-217ENST00000560033 RFC5P40937 340 aa10.21□□□□□ -0.77
PSMA4-217ENST00000560033 Q6ZNB5 142 aa10.21□□□□□ -0.77
PSMA4-217ENST00000560033 ZNF511Q8NB15 262 aa10.21□□□□□ -0.77
PSMA4-217ENST00000560033 CD109Q6YHK3 1445 aa10.21□□□□□ -0.78
PSMA4-217ENST00000560033 SPAG9O60271 1321 aaKnown RBP10.2□□□□□ -0.78
PSMA4-217ENST00000560033 TSC1Q92574 1164 aa10.2□□□□□ -0.78
PSMA4-217ENST00000560033 DENND4BO75064 1496 aaPredicted RBP10.19□□□□□ -0.78
PSMA4-217ENST00000560033 ADGRL1O94910 1474 aa10.19□□□□□ -0.78
PSMA4-217ENST00000560033 PZPP20742 1482 aa10.19□□□□□ -0.78
PSMA4-217ENST00000560033 SCAPERQ9BY12 1400 aa10.19□□□□□ -0.78
PSMA4-217ENST00000560033 CTHP32929 405 aa10.19□□□□□ -0.78
PSMA4-217ENST00000560033 AFAP1Q8N556 730 aa10.19□□□□□ -0.78
PSMA4-217ENST00000560033 SNIP1Q8TAD8 396 aaKnown RBP10.19□□□□□ -0.78
PSMA4-217ENST00000560033 LRRN4Q8WUT4 740 aa10.19□□□□□ -0.78
PSMA4-217ENST00000560033 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
PSMA4-217ENST00000560033 NUP155O75694 1391 aa10.18□□□□□ -0.78
PSMA4-217ENST00000560033 TONSLQ96HA7 1378 aa10.18□□□□□ -0.78
PSMA4-217ENST00000560033 AVPP01185 164 aa10.18□□□□□ -0.78
PSMA4-217ENST00000560033 TRAF7Q6Q0C0 670 aa10.18□□□□□ -0.78
PSMA4-217ENST00000560033 RTEL1-TNFRSF6BF6WH68 1400 aa10.17□□□□□ -0.78
PSMA4-217ENST00000560033 SMPD1P17405 629 aa10.17□□□□□ -0.78
PSMA4-217ENST00000560033 LINC01559Q495D7 138 aa10.17□□□□□ -0.78
PSMA4-217ENST00000560033 DUOX2Q9NRD8 1548 aa10.17□□□□□ -0.78
PSMA4-217ENST00000560033 MYT1Q01538 1121 aa10.16□□□□□ -0.78
PSMA4-217ENST00000560033 CYP4X1Q8N118 509 aa10.16□□□□□ -0.78
PSMA4-217ENST00000560033 CFAP74Q9C0B2 1584 aa10.16□□□□□ -0.78
PSMA4-217ENST00000560033 FAM187AA6NFU0 413 aa10.15□□□□□ -0.78
PSMA4-217ENST00000560033 AP1G2O75843 785 aa10.15□□□□□ -0.78
PSMA4-217ENST00000560033 MPNDQ8N594 471 aa10.15□□□□□ -0.78
PSMA4-217ENST00000560033 KDM5DQ9BY66 1539 aa10.15□□□□□ -0.78
PSMA4-217ENST00000560033 ERBINQ96RT1 1412 aa10.15□□□□□ -0.79
PSMA4-217ENST00000560033 ANKRD30BQ9BXX2 1392 aa10.14□□□□□ -0.79
PSMA4-217ENST00000560033 ZFYVE16Q7Z3T8 1539 aa10.14□□□□□ -0.79
PSMA4-217ENST00000560033 J3QL48 77 aa10.14□□□□□ -0.79
PSMA4-217ENST00000560033 PPP1R15AO75807 674 aaPredicted RBP10.14□□□□□ -0.79
PSMA4-217ENST00000560033 USP17L8P0C7I0 530 aa10.14□□□□□ -0.79
PSMA4-217ENST00000560033 VARSP26640 1264 aaKnown RBP10.14□□□□□ -0.79
PSMA4-217ENST00000560033 TMEM259Q4ZIN3 620 aa10.14□□□□□ -0.79
PSMA4-217ENST00000560033 C4orf48Q5BLP8 95 aa10.14□□□□□ -0.79
PSMA4-217ENST00000560033 SH3RF1Q7Z6J0 888 aa10.14□□□□□ -0.79
PSMA4-217ENST00000560033 CRIPAKQ8N1N5 446 aa10.14□□□□□ -0.79
PSMA4-217ENST00000560033 HMX1Q9NP08 348 aaPredicted RBP10.14□□□□□ -0.79
PSMA4-217ENST00000560033 GLI2P10070 1586 aa10.14□□□□□ -0.79
PSMA4-217ENST00000560033 ATP7AQ04656 1500 aa10.13□□□□□ -0.79
PSMA4-217ENST00000560033 NEO1Q92859 1461 aa10.13□□□□□ -0.79
PSMA4-217ENST00000560033 FAM69CQ0P6D2 419 aa10.13□□□□□ -0.79
PSMA4-217ENST00000560033 PKDCCQ504Y2 493 aa10.13□□□□□ -0.79
PSMA4-217ENST00000560033 SH3BP5LQ7L8J4 393 aa10.13□□□□□ -0.79
PSMA4-217ENST00000560033 EHBP1Q8NDI1 1231 aa10.13□□□□□ -0.79
PSMA4-217ENST00000560033 ARMC2Q8NEN0 867 aa10.13□□□□□ -0.79
PSMA4-217ENST00000560033 FOXJ1Q92949 421 aa10.13□□□□□ -0.79
PSMA4-217ENST00000560033 ZNF518AQ6AHZ1 1483 aa10.12□□□□□ -0.79
PSMA4-217ENST00000560033 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.793e-6■□□□□ 9.4
PSMA4-217ENST00000560033 UNC13BO14795 1591 aa10.12□□□□□ -0.79
PSMA4-217ENST00000560033 INO80Q9ULG1 1556 aaPredicted RBP10.12□□□□□ -0.79
PSMA4-217ENST00000560033 MAP3K4Q9Y6R4 1608 aa10.11□□□□□ -0.79
PSMA4-217ENST00000560033 POGZQ7Z3K3 1410 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms