RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 MTHFSP49914 203 aa12.19□□□□□ -0.46
SEMA4B-214ENST00000560003 EN1Q05925 392 aaPredicted RBP12.19□□□□□ -0.46
SEMA4B-214ENST00000560003 EIF4A2Q14240 407 aaKnown RBP12.19□□□□□ -0.46
SEMA4B-214ENST00000560003 NBPF14Q5TI25 921 aa12.19□□□□□ -0.46
SEMA4B-214ENST00000560003 EYA1Q99502 592 aa12.19□□□□□ -0.46
SEMA4B-214ENST00000560003 TNS2Q63HR2 1409 aa12.19□□□□□ -0.46
SEMA4B-214ENST00000560003 USHBP1Q8N6Y0 703 aa12.18□□□□□ -0.46
SEMA4B-214ENST00000560003 CFAP53Q96M91 514 aa12.18□□□□□ -0.46
SEMA4B-214ENST00000560003 KIF20BQ96Q89 1820 aa12.18□□□□□ -0.46
SEMA4B-214ENST00000560003 LTN1O94822 1766 aa12.18□□□□□ -0.46
SEMA4B-214ENST00000560003 CAMKK2Q96RR4 588 aa12.17□□□□□ -0.46
SEMA4B-214ENST00000560003 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
SEMA4B-214ENST00000560003 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
SEMA4B-214ENST00000560003 BRWD3Q6RI45 1802 aa12.16□□□□□ -0.46
SEMA4B-214ENST00000560003 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
SEMA4B-214ENST00000560003 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
SEMA4B-214ENST00000560003 DIAPH1O60610 1272 aaKnown RBP12.16□□□□□ -0.46
SEMA4B-214ENST00000560003 AMOTQ4VCS5 1084 aa12.16□□□□□ -0.46
SEMA4B-214ENST00000560003 PLEKHO1Q53GL0 409 aaPredicted RBP12.16□□□□□ -0.46
SEMA4B-214ENST00000560003 CNGB1Q14028 1251 aaPredicted RBP12.15□□□□□ -0.46
SEMA4B-214ENST00000560003 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
SEMA4B-214ENST00000560003 FAM208AQ9UK61 1670 aaKnown RBP12.15□□□□□ -0.46
SEMA4B-214ENST00000560003 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
SEMA4B-214ENST00000560003 IL13P35225 146 aa12.14□□□□□ -0.47
SEMA4B-214ENST00000560003 IFNL2Q8IZJ0 200 aa12.14□□□□□ -0.47
SEMA4B-214ENST00000560003 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
SEMA4B-214ENST00000560003 ACSBG1Q96GR2 724 aa12.14□□□□□ -0.47
SEMA4B-214ENST00000560003 NUDCQ9Y266 331 aa12.14□□□□□ -0.47
SEMA4B-214ENST00000560003 RGPD5Q99666 1765 aa12.14□□□□□ -0.47
SEMA4B-214ENST00000560003 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
SEMA4B-214ENST00000560003 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
SEMA4B-214ENST00000560003 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
SEMA4B-214ENST00000560003 KCNQ2O43526 872 aa12.12□□□□□ -0.47
SEMA4B-214ENST00000560003 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
SEMA4B-214ENST00000560003 DDX10Q13206 875 aaKnown RBP12.11□□□□□ -0.47
SEMA4B-214ENST00000560003 RALBP1Q15311 655 aa12.11□□□□□ -0.47
SEMA4B-214ENST00000560003 C1orf141Q5JVX7 400 aa12.11□□□□□ -0.47
SEMA4B-214ENST00000560003 SLC27A3Q5K4L6 730 aa12.11□□□□□ -0.47
SEMA4B-214ENST00000560003 LRRC37A3O60309 1634 aa12.11□□□□□ -0.47
SEMA4B-214ENST00000560003 MEGF6O75095 1541 aa12.11□□□□□ -0.47
SEMA4B-214ENST00000560003 CYP27B1O15528 508 aa12.1□□□□□ -0.47
SEMA4B-214ENST00000560003 PPP2R1AP30153 589 aa12.1□□□□□ -0.47
SEMA4B-214ENST00000560003 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
SEMA4B-214ENST00000560003 SMARCC1Q92922 1105 aaPredicted RBP12.1□□□□□ -0.47
SEMA4B-214ENST00000560003 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
SEMA4B-214ENST00000560003 NCAPD2Q15021 1401 aa12.1□□□□□ -0.47
SEMA4B-214ENST00000560003 PEAK1Q9H792 1746 aa12.09□□□□□ -0.47
SEMA4B-214ENST00000560003 ANKRD26Q9UPS8 1709 aa12.09□□□□□ -0.47
SEMA4B-214ENST00000560003 U2SURPO15042 1029 aaKnown RBP12.09□□□□□ -0.47
SEMA4B-214ENST00000560003 PHKG2P15735 406 aa12.09□□□□□ -0.47
SEMA4B-214ENST00000560003 DCAF5Q96JK2 942 aa12.09□□□□□ -0.47
SEMA4B-214ENST00000560003 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
SEMA4B-214ENST00000560003 ERVV-2B6SEH9 535 aa12.08□□□□□ -0.48
SEMA4B-214ENST00000560003 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
SEMA4B-214ENST00000560003 MPRIPQ6WCQ1 1025 aa12.08□□□□□ -0.48
SEMA4B-214ENST00000560003 PTF1AQ7RTS3 328 aa12.08□□□□□ -0.48
SEMA4B-214ENST00000560003 PNNQ9H307 717 aaKnown RBP12.08□□□□□ -0.48
SEMA4B-214ENST00000560003 STK32BQ9NY57 414 aa12.08□□□□□ -0.48
SEMA4B-214ENST00000560003 MAP2P11137 1827 aaKnown RBP12.08□□□□□ -0.48
SEMA4B-214ENST00000560003 NEFMP07197 916 aa12.07□□□□□ -0.48
SEMA4B-214ENST00000560003 R3HDM1Q15032 1099 aaKnown RBP12.07□□□□□ -0.48
SEMA4B-214ENST00000560003 TMOD3Q9NYL9 352 aa12.07□□□□□ -0.48
SEMA4B-214ENST00000560003 KDRP35968 1356 aa12.06□□□□□ -0.48
SEMA4B-214ENST00000560003 HMOX1P09601 288 aa12.06□□□□□ -0.48
SEMA4B-214ENST00000560003 AKAP4Q5JQC9 854 aa12.06□□□□□ -0.48
SEMA4B-214ENST00000560003 POTEDQ86YR6 584 aa12.06□□□□□ -0.48
SEMA4B-214ENST00000560003 AEBP1Q8IUX7 1158 aa12.06□□□□□ -0.48
SEMA4B-214ENST00000560003 PROM2Q8N271 834 aa12.06□□□□□ -0.48
SEMA4B-214ENST00000560003 ZNF316A6NFI3 1004 aaPredicted RBP12.05□□□□□ -0.48
SEMA4B-214ENST00000560003 FCHSD2O94868 740 aa12.05□□□□□ -0.48
SEMA4B-214ENST00000560003 CABP4P57796 275 aa12.05□□□□□ -0.48
SEMA4B-214ENST00000560003 PSDA5PKW4 1024 aaPredicted RBP12.04□□□□□ -0.48
SEMA4B-214ENST00000560003 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
SEMA4B-214ENST00000560003 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEMA4B-214ENST00000560003 GAS2L2Q8NHY3 880 aa12.04□□□□□ -0.48
SEMA4B-214ENST00000560003 WNK3Q9BYP7 1800 aa12.04□□□□□ -0.48
SEMA4B-214ENST00000560003 SLC15A2Q16348 729 aa12.03□□□□□ -0.48
SEMA4B-214ENST00000560003 PIGBQ92521 554 aa12.03□□□□□ -0.48
SEMA4B-214ENST00000560003 CCNL1Q9UK58 526 aaPredicted RBP12.03□□□□□ -0.48
SEMA4B-214ENST00000560003 TNS1Q9HBL0 1735 aaKnown RBP12□□□□□ -0.49
SEMA4B-214ENST00000560003 GNAT3A8MTJ3 354 aa12□□□□□ -0.49
SEMA4B-214ENST00000560003 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
SEMA4B-214ENST00000560003 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
SEMA4B-214ENST00000560003 TFCP2L1Q9NZI6 479 aa12□□□□□ -0.49
SEMA4B-214ENST00000560003 MYBBP1AQ9BQG0 1328 aaKnown RBP12□□□□□ -0.49
SEMA4B-214ENST00000560003 PRKAR2BP31323 418 aa11.99□□□□□ -0.49
SEMA4B-214ENST00000560003 NFATC2IPQ8NCF5 419 aa11.99□□□□□ -0.49
SEMA4B-214ENST00000560003 RTF1Q92541 710 aaKnown RBP11.99□□□□□ -0.49
SEMA4B-214ENST00000560003 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
SEMA4B-214ENST00000560003 SPON1Q9HCB6 807 aa11.99□□□□□ -0.49
SEMA4B-214ENST00000560003 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
SEMA4B-214ENST00000560003 PALLDQ8WX93 1383 aa11.99□□□□□ -0.49
SEMA4B-214ENST00000560003 NHSQ6T4R5 1651 aa11.99□□□□□ -0.49
SEMA4B-214ENST00000560003 RGPD2P0DJD1 1756 aa11.99□□□□□ -0.49
SEMA4B-214ENST00000560003 LOC102724428A0A0B4J2F2 783 aa11.98□□□□□ -0.49
SEMA4B-214ENST00000560003 HTATSF1O43719 755 aaKnown RBP11.98□□□□□ -0.49
SEMA4B-214ENST00000560003 SIK1P57059 783 aa11.98□□□□□ -0.49
SEMA4B-214ENST00000560003 SLC16A10Q8TF71 515 aa11.98□□□□□ -0.49
SEMA4B-214ENST00000560003 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
SEMA4B-214ENST00000560003 ASAP1Q9ULH1 1129 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms