RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 USHBP1Q8N6Y0 703 aa12.51□□□□□ -0.41
IDH3A-217ENST00000559889 POLR3GLQ9BT43 218 aa12.51□□□□□ -0.41
IDH3A-217ENST00000559889 CGNL1Q0VF96 1302 aa12.51□□□□□ -0.41
IDH3A-217ENST00000559889 SMG6Q86US8 1419 aaKnown RBP12.49□□□□□ -0.41
IDH3A-217ENST00000559889 SHANK3Q9BYB0 1731 aa12.49□□□□□ -0.41
IDH3A-217ENST00000559889 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
IDH3A-217ENST00000559889 ZCRB1Q8TBF4 217 aaKnown RBP12.49□□□□□ -0.41
IDH3A-217ENST00000559889 PDGFDQ9GZP0 370 aaPredicted RBP12.48□□□□□ -0.41
IDH3A-217ENST00000559889 PANK3Q9H999 370 aa12.48□□□□□ -0.41
IDH3A-217ENST00000559889 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
IDH3A-217ENST00000559889 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
IDH3A-217ENST00000559889 BTAF1O14981 1849 aa12.47□□□□□ -0.41
IDH3A-217ENST00000559889 NCAPD2Q15021 1401 aa12.47□□□□□ -0.41
IDH3A-217ENST00000559889 WASHC2AQ641Q2 1341 aa12.47□□□□□ -0.41
IDH3A-217ENST00000559889 NSD2O96028 1365 aa12.46□□□□□ -0.41
IDH3A-217ENST00000559889 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
IDH3A-217ENST00000559889 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
IDH3A-217ENST00000559889 RAPGEF4Q8WZA2 1011 aa12.46□□□□□ -0.41
IDH3A-217ENST00000559889 LRRC4BQ9NT99 713 aa12.46□□□□□ -0.41
IDH3A-217ENST00000559889 SLC15A2Q16348 729 aa12.46□□□□□ -0.42
IDH3A-217ENST00000559889 CASZ1Q86V15 1759 aa12.46□□□□□ -0.42
IDH3A-217ENST00000559889 PAPPAQ13219 1627 aa12.45□□□□□ -0.42
IDH3A-217ENST00000559889 SPON1Q9HCB6 807 aa12.45□□□□□ -0.42
IDH3A-217ENST00000559889 TATP17735 454 aaPredicted RBP12.44□□□□□ -0.42
IDH3A-217ENST00000559889 TNNT2P45379 298 aaPredicted RBP12.44□□□□□ -0.42
IDH3A-217ENST00000559889 MSH5O43196 834 aa12.44□□□□□ -0.42
IDH3A-217ENST00000559889 DOT1LQ8TEK3 1739 aa12.44□□□□□ -0.42
IDH3A-217ENST00000559889 EYA1Q99502 592 aa12.44□□□□□ -0.42
IDH3A-217ENST00000559889 STK32BQ9NY57 414 aa12.44□□□□□ -0.42
IDH3A-217ENST00000559889 MAP2P11137 1827 aaKnown RBP12.43□□□□□ -0.42
IDH3A-217ENST00000559889 CYP27B1O15528 508 aa12.43□□□□□ -0.42
IDH3A-217ENST00000559889 SYTL4Q96C24 671 aaPredicted RBP12.43□□□□□ -0.42
IDH3A-217ENST00000559889 ZNF827Q17R98 1081 aa12.43□□□□□ -0.42
IDH3A-217ENST00000559889 KIF7Q2M1P5 1343 aa12.42□□□□□ -0.42
IDH3A-217ENST00000559889 PCDH11XQ9BZA7 1347 aa12.42□□□□□ -0.42
IDH3A-217ENST00000559889 PCDH11YQ9BZA8 1340 aa12.42□□□□□ -0.42
IDH3A-217ENST00000559889 ZBTB7AO95365 584 aa12.42□□□□□ -0.42
IDH3A-217ENST00000559889 EIF4A2Q14240 407 aaKnown RBP12.42□□□□□ -0.42
IDH3A-217ENST00000559889 PTGER2P43116 358 aa12.41□□□□□ -0.42
IDH3A-217ENST00000559889 KCNQ4P56696 695 aa12.41□□□□□ -0.42
IDH3A-217ENST00000559889 SLC27A3Q5K4L6 730 aa12.41□□□□□ -0.42
IDH3A-217ENST00000559889 UTRNP46939 3433 aa12.41□□□□□ -0.42
IDH3A-217ENST00000559889 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
IDH3A-217ENST00000559889 PKD1L3Q7Z443 1732 aa12.4□□□□□ -0.42
IDH3A-217ENST00000559889 KAT6BQ8WYB5 2073 aa12.4□□□□□ -0.42
IDH3A-217ENST00000559889 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
IDH3A-217ENST00000559889 LY75O60449 1722 aa12.39□□□□□ -0.43
IDH3A-217ENST00000559889 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
IDH3A-217ENST00000559889 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
IDH3A-217ENST00000559889 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
IDH3A-217ENST00000559889 KNSTRNQ9Y448 316 aa12.38□□□□□ -0.43
IDH3A-217ENST00000559889 MORC1Q86VD1 984 aa12.38□□□□□ -0.43
IDH3A-217ENST00000559889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
IDH3A-217ENST00000559889 PPP1R1BQ9UD71 204 aaPredicted RBP12.38□□□□□ -0.43
IDH3A-217ENST00000559889 IGSF1Q8N6C5 1336 aa12.38□□□□□ -0.43
IDH3A-217ENST00000559889 TOGARAM1Q9Y4F4 1720 aa12.37□□□□□ -0.43
IDH3A-217ENST00000559889 PER1O15534 1290 aaPredicted RBP12.37□□□□□ -0.43
IDH3A-217ENST00000559889 MTFR1LQ9H019 292 aa12.37□□□□□ -0.43
IDH3A-217ENST00000559889 SPG7Q9UQ90 795 aa12.37□□□□□ -0.43
IDH3A-217ENST00000559889 MPRIPQ6WCQ1 1025 aa12.36□□□□□ -0.43
IDH3A-217ENST00000559889 CCNL1Q9UK58 526 aaPredicted RBP12.36□□□□□ -0.43
IDH3A-217ENST00000559889 GOLGB1Q14789 3259 aaKnown RBP12.36□□□□□ -0.43
IDH3A-217ENST00000559889 PNPLA7Q6ZV29 1317 aa12.36□□□□□ -0.43
IDH3A-217ENST00000559889 PLEKHG2Q9H7P9 1386 aa12.35□□□□□ -0.43
IDH3A-217ENST00000559889 PHKG2P15735 406 aa12.35□□□□□ -0.43
IDH3A-217ENST00000559889 PIGBQ92521 554 aa12.35□□□□□ -0.43
IDH3A-217ENST00000559889 PALLDQ8WX93 1383 aa12.34□□□□□ -0.43
IDH3A-217ENST00000559889 TFCP2L1Q9NZI6 479 aa12.34□□□□□ -0.43
IDH3A-217ENST00000559889 QSER1Q2KHR3 1735 aa12.33□□□□□ -0.44
IDH3A-217ENST00000559889 IFNL2Q8IZJ0 200 aa12.33□□□□□ -0.44
IDH3A-217ENST00000559889 ANP32CO43423 234 aa12.33□□□□□ -0.44
IDH3A-217ENST00000559889 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
IDH3A-217ENST00000559889 GTF3C3Q9Y5Q9 886 aa12.33□□□□□ -0.44
IDH3A-217ENST00000559889 ITGB4P16144 1822 aa12.33□□□□□ -0.44
IDH3A-217ENST00000559889 TUBGCP6Q96RT7 1819 aa12.33□□□□□ -0.44
IDH3A-217ENST00000559889 IL13P35225 146 aa12.32□□□□□ -0.44
IDH3A-217ENST00000559889 SLC16A10Q8TF71 515 aa12.32□□□□□ -0.44
IDH3A-217ENST00000559889 FHDC1Q9C0D6 1143 aaPredicted RBP12.32□□□□□ -0.44
IDH3A-217ENST00000559889 KDRP35968 1356 aa12.31□□□□□ -0.44
IDH3A-217ENST00000559889 MTHFSP49914 203 aa12.31□□□□□ -0.44
IDH3A-217ENST00000559889 SMARCC1Q92922 1105 aaPredicted RBP12.31□□□□□ -0.44
IDH3A-217ENST00000559889 ARXQ96QS3 562 aa12.31□□□□□ -0.44
IDH3A-217ENST00000559889 SYT17Q9BSW7 474 aa12.31□□□□□ -0.44
IDH3A-217ENST00000559889 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
IDH3A-217ENST00000559889 COL23A1Q86Y22 540 aaPredicted RBP12.3□□□□□ -0.44
IDH3A-217ENST00000559889 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
IDH3A-217ENST00000559889 ASAP1Q9ULH1 1129 aa12.3□□□□□ -0.44
IDH3A-217ENST00000559889 C5P01031 1676 aa12.3□□□□□ -0.44
IDH3A-217ENST00000559889 SULT6B1Q6IMI4 303 aa12.3□□□□□ -0.44
IDH3A-217ENST00000559889 AMIGO3Q86WK7 504 aa12.3□□□□□ -0.44
IDH3A-217ENST00000559889 COL24A1Q17RW2 1714 aa12.29□□□□□ -0.44
IDH3A-217ENST00000559889 PLEKHO1Q53GL0 409 aaPredicted RBP12.29□□□□□ -0.44
IDH3A-217ENST00000559889 NPC1L1Q9UHC9 1359 aa12.29□□□□□ -0.44
IDH3A-217ENST00000559889 KDM6AO15550 1401 aaPredicted RBP12.29□□□□□ -0.44
IDH3A-217ENST00000559889 AMOTQ4VCS5 1084 aa12.29□□□□□ -0.44
IDH3A-217ENST00000559889 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
IDH3A-217ENST00000559889 MAP3K5Q99683 1374 aa12.28□□□□□ -0.44
IDH3A-217ENST00000559889 LOC102724428A0A0B4J2F2 783 aa12.28□□□□□ -0.44
IDH3A-217ENST00000559889 SIK1P57059 783 aa12.28□□□□□ -0.44
IDH3A-217ENST00000559889 DCAF5Q96JK2 942 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms