RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 ANKRD36BQ8N2N9 1353 aa15.68■□□□□ 0.1
HERC1-204ENST00000559715 FYB1O15117 783 aa15.68■□□□□ 0.1
HERC1-204ENST00000559715 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
HERC1-204ENST00000559715 PRIM1P49642 420 aaKnown RBP15.67■□□□□ 0.1
HERC1-204ENST00000559715 NBPF6Q5VWK0 638 aa15.67■□□□□ 0.1
HERC1-204ENST00000559715 NBPF4Q96M43 638 aa15.67■□□□□ 0.1
HERC1-204ENST00000559715 ARXQ96QS3 562 aa15.67■□□□□ 0.1
HERC1-204ENST00000559715 SLC27A3Q5K4L6 730 aa15.66■□□□□ 0.1
HERC1-204ENST00000559715 ZNF784Q8NCA9 323 aaPredicted RBP15.66■□□□□ 0.1
HERC1-204ENST00000559715 COG3Q96JB2 828 aa15.66■□□□□ 0.1
HERC1-204ENST00000559715 RRS1Q15050 365 aaKnown RBP15.65■□□□□ 0.1
HERC1-204ENST00000559715 RTL1A6NKG5 1358 aa15.64■□□□□ 0.09
HERC1-204ENST00000559715 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
HERC1-204ENST00000559715 KIF20BQ96Q89 1820 aa15.64■□□□□ 0.09
HERC1-204ENST00000559715 DCAF8L1A6NGE4 600 aa15.64■□□□□ 0.09
HERC1-204ENST00000559715 ZCRB1Q8TBF4 217 aaKnown RBP15.64■□□□□ 0.09
HERC1-204ENST00000559715 SLC16A10Q8TF71 515 aa15.64■□□□□ 0.09
HERC1-204ENST00000559715 GGNBP2Q9H3C7 697 aa15.63■□□□□ 0.09
HERC1-204ENST00000559715 TOGARAM1Q9Y4F4 1720 aa15.63■□□□□ 0.09
HERC1-204ENST00000559715 ITGB4P16144 1822 aa15.62■□□□□ 0.09
HERC1-204ENST00000559715 AMPHP49418 695 aa15.62■□□□□ 0.09
HERC1-204ENST00000559715 CARD14Q9BXL6 1004 aa15.62■□□□□ 0.09
HERC1-204ENST00000559715 HSP90AB2PQ58FF8 381 aa15.61■□□□□ 0.09
HERC1-204ENST00000559715 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
HERC1-204ENST00000559715 USP47Q96K76 1375 aa15.61■□□□□ 0.09
HERC1-204ENST00000559715 ANKRD26Q9UPS8 1709 aa15.6■□□□□ 0.09
HERC1-204ENST00000559715 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
HERC1-204ENST00000559715 C5P01031 1676 aa15.6■□□□□ 0.09
HERC1-204ENST00000559715 INSRP06213 1382 aa15.6■□□□□ 0.09
HERC1-204ENST00000559715 PKD1L3Q7Z443 1732 aa15.6■□□□□ 0.09
HERC1-204ENST00000559715 NCAPD2Q15021 1401 aa15.6■□□□□ 0.09
HERC1-204ENST00000559715 SYTL4Q96C24 671 aaPredicted RBP15.59■□□□□ 0.09
HERC1-204ENST00000559715 MAP2P11137 1827 aaKnown RBP15.59■□□□□ 0.09
HERC1-204ENST00000559715 COL23A1Q86Y22 540 aaPredicted RBP15.58■□□□□ 0.08
HERC1-204ENST00000559715 NLGN2Q8NFZ4 835 aa15.58■□□□□ 0.08
HERC1-204ENST00000559715 CGNL1Q0VF96 1302 aa15.58■□□□□ 0.08
HERC1-204ENST00000559715 CYP27B1O15528 508 aa15.57■□□□□ 0.08
HERC1-204ENST00000559715 TMF1P82094 1093 aa15.57■□□□□ 0.08
HERC1-204ENST00000559715 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
HERC1-204ENST00000559715 KIF24Q5T7B8 1368 aa15.57■□□□□ 0.08
HERC1-204ENST00000559715 AMIGO3Q86WK7 504 aa15.56■□□□□ 0.08
HERC1-204ENST00000559715 CCNL1Q9UK58 526 aaPredicted RBP15.56■□□□□ 0.08
HERC1-204ENST00000559715 UBR3Q6ZT12 1888 aa15.55■□□□□ 0.08
HERC1-204ENST00000559715 FLT4P35916 1363 aa15.55■□□□□ 0.08
HERC1-204ENST00000559715 EMILIN1Q9Y6C2 1016 aa15.54■□□□□ 0.08
HERC1-204ENST00000559715 YBX3P16989 372 aaKnown RBP eCLIP15.53■□□□□ 0.08
HERC1-204ENST00000559715 RAPGEF4Q8WZA2 1011 aa15.53■□□□□ 0.08
HERC1-204ENST00000559715 C4BP0C0L5 1744 aa15.53■□□□□ 0.08
HERC1-204ENST00000559715 TATP17735 454 aaPredicted RBP15.52■□□□□ 0.08
HERC1-204ENST00000559715 POLD1P28340 1107 aa15.52■□□□□ 0.08
HERC1-204ENST00000559715 NKX1-1Q15270 411 aaPredicted RBP15.52■□□□□ 0.08
HERC1-204ENST00000559715 NSD3Q9BZ95 1437 aa15.51■□□□□ 0.07
HERC1-204ENST00000559715 PCDH11XQ9BZA7 1347 aa15.51■□□□□ 0.07
HERC1-204ENST00000559715 PCDH11YQ9BZA8 1340 aa15.51■□□□□ 0.07
HERC1-204ENST00000559715 GPR162Q16538 588 aa15.51■□□□□ 0.07
HERC1-204ENST00000559715 SMG6Q86US8 1419 aaKnown RBP15.51■□□□□ 0.07
HERC1-204ENST00000559715 PALLDQ8WX93 1383 aa15.5■□□□□ 0.07
HERC1-204ENST00000559715 C1QTNF8P60827 252 aa15.5■□□□□ 0.07
HERC1-204ENST00000559715 WASHC2AQ641Q2 1341 aa15.49■□□□□ 0.07
HERC1-204ENST00000559715 MSH5O43196 834 aa15.49■□□□□ 0.07
HERC1-204ENST00000559715 MSL1Q68DK7 614 aa15.49■□□□□ 0.07
HERC1-204ENST00000559715 MPRIPQ6WCQ1 1025 aa15.49■□□□□ 0.07
HERC1-204ENST00000559715 SMIM5Q71RC9 77 aa15.49■□□□□ 0.07
HERC1-204ENST00000559715 PIGBQ92521 554 aa15.49■□□□□ 0.07
HERC1-204ENST00000559715 KLHL34Q8N239 644 aa15.48■□□□□ 0.07
HERC1-204ENST00000559715 EYA1Q99502 592 aa15.48■□□□□ 0.07
HERC1-204ENST00000559715 TRIM26Q12899 539 aaPredicted RBP15.47■□□□□ 0.07
HERC1-204ENST00000559715 CDCA8Q53HL2 280 aa15.47■□□□□ 0.07
HERC1-204ENST00000559715 POLKQ9UBT6 870 aa15.47■□□□□ 0.07
HERC1-204ENST00000559715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.45■□□□□ 0.068e-6■■■□□ 14.7
HERC1-204ENST00000559715 KIAA1551Q9HCM1 1747 aa15.44■□□□□ 0.06
HERC1-204ENST00000559715 ITPK1Q13572 414 aa15.44■□□□□ 0.06
HERC1-204ENST00000559715 LINC00116Q8NCU8 138 aa15.44■□□□□ 0.06
HERC1-204ENST00000559715 CD2APQ9Y5K6 639 aa15.44■□□□□ 0.06
HERC1-204ENST00000559715 FLAD1Q8NFF5 587 aa15.43■□□□□ 0.06
HERC1-204ENST00000559715 SMARCC1Q92922 1105 aaPredicted RBP15.43■□□□□ 0.06
HERC1-204ENST00000559715 ASAP1Q9ULH1 1129 aa15.43■□□□□ 0.06
HERC1-204ENST00000559715 TIMELESSQ9UNS1 1208 aa15.43■□□□□ 0.06
HERC1-204ENST00000559715 ZNF831Q5JPB2 1677 aa15.43■□□□□ 0.06
HERC1-204ENST00000559715 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
HERC1-204ENST00000559715 LOC102724428A0A0B4J2F2 783 aa15.42■□□□□ 0.06
HERC1-204ENST00000559715 PHKG2P15735 406 aa15.42■□□□□ 0.06
HERC1-204ENST00000559715 SIK1P57059 783 aa15.42■□□□□ 0.06
HERC1-204ENST00000559715 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
HERC1-204ENST00000559715 SLC4A9Q96Q91 983 aa15.42■□□□□ 0.06
HERC1-204ENST00000559715 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
HERC1-204ENST00000559715 ADCY9O60503 1353 aa15.41■□□□□ 0.06
HERC1-204ENST00000559715 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.41■□□□□ 0.06
HERC1-204ENST00000559715 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
HERC1-204ENST00000559715 GRIN3BO60391 1043 aa15.41■□□□□ 0.06
HERC1-204ENST00000559715 EIF4A2Q14240 407 aaKnown RBP15.41■□□□□ 0.06
HERC1-204ENST00000559715 ATG3Q9NT62 314 aa15.41■□□□□ 0.06
HERC1-204ENST00000559715 SPG7Q9UQ90 795 aa15.41■□□□□ 0.06
HERC1-204ENST00000559715 COL5A3P25940 1745 aaPredicted RBP15.4■□□□□ 0.06
HERC1-204ENST00000559715 KDRP35968 1356 aa15.4■□□□□ 0.06
HERC1-204ENST00000559715 SENP3-EIF4A1A0A087X0R7 540 aa15.39■□□□□ 0.05
HERC1-204ENST00000559715 SSFA2P28290 1259 aa15.39■□□□□ 0.05
HERC1-204ENST00000559715 IGSF1Q8N6C5 1336 aa15.39■□□□□ 0.05
HERC1-204ENST00000559715 PLEKHG2Q9H7P9 1386 aa15.38■□□□□ 0.05
HERC1-204ENST00000559715 IFNL2Q8IZJ0 200 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms