RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 ACSBG1Q96GR2 724 aa17.66■□□□□ 0.42
BMP4-208ENST00000559642 BCL11BQ9C0K0 894 aaPredicted RBP17.66■□□□□ 0.42
BMP4-208ENST00000559642 NCAPD2Q15021 1401 aa17.65■□□□□ 0.42
BMP4-208ENST00000559642 PKD1L3Q7Z443 1732 aa17.65■□□□□ 0.42
BMP4-208ENST00000559642 PSDA5PKW4 1024 aaPredicted RBP17.65■□□□□ 0.42
BMP4-208ENST00000559642 KCNQ2O43526 872 aa17.65■□□□□ 0.42
BMP4-208ENST00000559642 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.41
BMP4-208ENST00000559642 PER1O15534 1290 aaPredicted RBP17.62■□□□□ 0.41
BMP4-208ENST00000559642 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
BMP4-208ENST00000559642 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
BMP4-208ENST00000559642 ZCRB1Q8TBF4 217 aaKnown RBP17.62■□□□□ 0.41
BMP4-208ENST00000559642 KAT6BQ8WYB5 2073 aa17.62■□□□□ 0.41
BMP4-208ENST00000559642 CC2D1BQ5T0F9 858 aaKnown RBP17.61■□□□□ 0.41
BMP4-208ENST00000559642 EYA1Q99502 592 aa17.61■□□□□ 0.41
BMP4-208ENST00000559642 CNGB1Q14028 1251 aaPredicted RBP17.6■□□□□ 0.41
BMP4-208ENST00000559642 R3HDM1Q15032 1099 aaKnown RBP17.6■□□□□ 0.41
BMP4-208ENST00000559642 TOGARAM1Q9Y4F4 1720 aa17.6■□□□□ 0.41
BMP4-208ENST00000559642 PLSCR1O15162 318 aa17.59■□□□□ 0.41
BMP4-208ENST00000559642 PCDH11XQ9BZA7 1347 aa17.57■□□□□ 0.4
BMP4-208ENST00000559642 PCDH11YQ9BZA8 1340 aa17.57■□□□□ 0.4
BMP4-208ENST00000559642 IGSF1Q8N6C5 1336 aa17.56■□□□□ 0.4
BMP4-208ENST00000559642 PROM2Q8N271 834 aa17.56■□□□□ 0.4
BMP4-208ENST00000559642 LRP5O75197 1615 aa17.56■□□□□ 0.4
BMP4-208ENST00000559642 NPC1L1Q9UHC9 1359 aa17.55■□□□□ 0.4
BMP4-208ENST00000559642 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
BMP4-208ENST00000559642 ANO8Q9HCE9 1232 aaPredicted RBP17.55■□□□□ 0.4
BMP4-208ENST00000559642 PAPPAQ13219 1627 aa17.54■□□□□ 0.4
BMP4-208ENST00000559642 CYP27B1O15528 508 aa17.54■□□□□ 0.4
BMP4-208ENST00000559642 PRIM1P49642 420 aaKnown RBP17.54■□□□□ 0.4
BMP4-208ENST00000559642 TXNRD1Q16881 649 aa17.54■□□□□ 0.4
BMP4-208ENST00000559642 ITGB4P16144 1822 aa17.54■□□□□ 0.4
BMP4-208ENST00000559642 MTHFSP49914 203 aa17.53■□□□□ 0.4
BMP4-208ENST00000559642 NBPF14Q5TI25 921 aa17.53■□□□□ 0.4
BMP4-208ENST00000559642 LY75O60449 1722 aa17.52■□□□□ 0.4
BMP4-208ENST00000559642 AEBP1Q8IUX7 1158 aa17.52■□□□□ 0.4
BMP4-208ENST00000559642 IL13P35225 146 aa17.51■□□□□ 0.39
BMP4-208ENST00000559642 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
BMP4-208ENST00000559642 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
BMP4-208ENST00000559642 COL3A1P02461 1466 aaPredicted RBP17.5■□□□□ 0.39
BMP4-208ENST00000559642 SULT6B1Q6IMI4 303 aa17.48■□□□□ 0.39
BMP4-208ENST00000559642 LRRC4BQ9NT99 713 aa17.47■□□□□ 0.39
BMP4-208ENST00000559642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.47■□□□□ 0.39
BMP4-208ENST00000559642 KDRP35968 1356 aa17.47■□□□□ 0.39
BMP4-208ENST00000559642 PLEKHG2Q9H7P9 1386 aa17.47■□□□□ 0.39
BMP4-208ENST00000559642 TUBGCP6Q96RT7 1819 aa17.47■□□□□ 0.39
BMP4-208ENST00000559642 PHKG2P15735 406 aa17.46■□□□□ 0.39
BMP4-208ENST00000559642 KCNQ4P56696 695 aa17.46■□□□□ 0.39
BMP4-208ENST00000559642 STK32BQ9NY57 414 aa17.46■□□□□ 0.39
BMP4-208ENST00000559642 NKX1-1Q15270 411 aaPredicted RBP17.45■□□□□ 0.38
BMP4-208ENST00000559642 MPRIPQ6WCQ1 1025 aa17.45■□□□□ 0.38
BMP4-208ENST00000559642 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
BMP4-208ENST00000559642 PDGFDQ9GZP0 370 aaPredicted RBP17.45■□□□□ 0.38
BMP4-208ENST00000559642 DIAPH1O60610 1272 aaKnown RBP17.44■□□□□ 0.38
BMP4-208ENST00000559642 C5P01031 1676 aa17.44■□□□□ 0.38
BMP4-208ENST00000559642 SRCAPQ6ZRS2 3230 aa17.44■□□□□ 0.38
BMP4-208ENST00000559642 HMOX1P09601 288 aa17.43■□□□□ 0.38
BMP4-208ENST00000559642 SLC15A2Q16348 729 aa17.43■□□□□ 0.38
BMP4-208ENST00000559642 ZNF827Q17R98 1081 aa17.43■□□□□ 0.38
BMP4-208ENST00000559642 ZNF530Q6P9A1 599 aaPredicted RBP17.43■□□□□ 0.38
BMP4-208ENST00000559642 KDM6AO15550 1401 aaPredicted RBP17.43■□□□□ 0.38
BMP4-208ENST00000559642 PALLDQ8WX93 1383 aa17.42■□□□□ 0.38
BMP4-208ENST00000559642 QSER1Q2KHR3 1735 aa17.42■□□□□ 0.38
BMP4-208ENST00000559642 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
BMP4-208ENST00000559642 SLC27A3Q5K4L6 730 aa17.42■□□□□ 0.38
BMP4-208ENST00000559642 TAF1LQ8IZX4 1826 aa17.42■□□□□ 0.38
BMP4-208ENST00000559642 PIGBQ92521 554 aa17.41■□□□□ 0.38
BMP4-208ENST00000559642 CCNL1Q9UK58 526 aaPredicted RBP17.41■□□□□ 0.38
BMP4-208ENST00000559642 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
BMP4-208ENST00000559642 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
BMP4-208ENST00000559642 AMOTQ4VCS5 1084 aa17.4■□□□□ 0.38
BMP4-208ENST00000559642 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
BMP4-208ENST00000559642 SCN11AQ9UI33 1791 aa17.4■□□□□ 0.38
BMP4-208ENST00000559642 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
BMP4-208ENST00000559642 ZBTB7AO95365 584 aa17.38■□□□□ 0.37
BMP4-208ENST00000559642 C1orf141Q5JVX7 400 aa17.38■□□□□ 0.37
BMP4-208ENST00000559642 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
BMP4-208ENST00000559642 DCAF5Q96JK2 942 aa17.37■□□□□ 0.37
BMP4-208ENST00000559642 C4BP0C0L5 1744 aa17.36■□□□□ 0.37
BMP4-208ENST00000559642 HSP90AB1P08238 724 aaKnown RBP17.36■□□□□ 0.37
BMP4-208ENST00000559642 SMARCC1Q92922 1105 aaPredicted RBP17.36■□□□□ 0.37
BMP4-208ENST00000559642 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
BMP4-208ENST00000559642 ASAP1Q9ULH1 1129 aa17.36■□□□□ 0.37
BMP4-208ENST00000559642 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
BMP4-208ENST00000559642 SPON1Q9HCB6 807 aa17.35■□□□□ 0.37
BMP4-208ENST00000559642 PNPLA7Q6ZV29 1317 aa17.34■□□□□ 0.37
BMP4-208ENST00000559642 ADAMTS7Q9UKP4 1686 aa17.34■□□□□ 0.37
BMP4-208ENST00000559642 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
BMP4-208ENST00000559642 MTHFSDQ2M296 383 aaKnown RBP17.33■□□□□ 0.36
BMP4-208ENST00000559642 ATG3Q9NT62 314 aa17.33■□□□□ 0.36
BMP4-208ENST00000559642 TFCP2L1Q9NZI6 479 aa17.33■□□□□ 0.36
BMP4-208ENST00000559642 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.36
BMP4-208ENST00000559642 MRC1P22897 1456 aa17.32■□□□□ 0.36
BMP4-208ENST00000559642 CABP4P57796 275 aa17.32■□□□□ 0.36
BMP4-208ENST00000559642 AKAP4Q5JQC9 854 aa17.32■□□□□ 0.36
BMP4-208ENST00000559642 UBR3Q6ZT12 1888 aa17.31■□□□□ 0.36
BMP4-208ENST00000559642 LOC102724428A0A0B4J2F2 783 aa17.31■□□□□ 0.36
BMP4-208ENST00000559642 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
BMP4-208ENST00000559642 SIK1P57059 783 aa17.31■□□□□ 0.36
BMP4-208ENST00000559642 COL5A3P25940 1745 aaPredicted RBP17.3■□□□□ 0.36
BMP4-208ENST00000559642 PTGER2P43116 358 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms