RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 DOT1LQ8TEK3 1739 aa33.42■■■□□ 2.94
PBX1-217ENST00000559578 AKT1S1Q96B36 256 aa33.42■■■□□ 2.94
PBX1-217ENST00000559578 ARXQ96QS3 562 aa33.42■■■□□ 2.94
PBX1-217ENST00000559578 MEGF6O75095 1541 aa33.42■■■□□ 2.94
PBX1-217ENST00000559578 SMG6Q86US8 1419 aaKnown RBP33.41■■■□□ 2.94
PBX1-217ENST00000559578 SHANK3Q9BYB0 1731 aa33.39■■■□□ 2.94
PBX1-217ENST00000559578 CGNL1Q0VF96 1302 aa33.39■■■□□ 2.94
PBX1-217ENST00000559578 NBPF6Q5VWK0 638 aa33.39■■■□□ 2.94
PBX1-217ENST00000559578 NBPF4Q96M43 638 aa33.39■■■□□ 2.94
PBX1-217ENST00000559578 SLC16A10Q8TF71 515 aa33.38■■■□□ 2.93
PBX1-217ENST00000559578 QSER1Q2KHR3 1735 aa33.38■■■□□ 2.93
PBX1-217ENST00000559578 KIF20BQ96Q89 1820 aa33.37■■■□□ 2.93
PBX1-217ENST00000559578 RAPGEF4Q8WZA2 1011 aa33.36■■■□□ 2.93
PBX1-217ENST00000559578 USHBP1Q8N6Y0 703 aa33.35■■■□□ 2.93
PBX1-217ENST00000559578 TFCP2L1Q9NZI6 479 aa33.35■■■□□ 2.93
PBX1-217ENST00000559578 NSD2O96028 1365 aa33.34■■■□□ 2.93
PBX1-217ENST00000559578 LY75O60449 1722 aa33.34■■■□□ 2.93
PBX1-217ENST00000559578 MAP3K5Q99683 1374 aa33.34■■■□□ 2.93
PBX1-217ENST00000559578 PNPLA7Q6ZV29 1317 aa33.33■■■□□ 2.93
PBX1-217ENST00000559578 KCNQ4P56696 695 aa33.33■■■□□ 2.93
PBX1-217ENST00000559578 INSRP06213 1382 aa33.33■■■□□ 2.93
PBX1-217ENST00000559578 TATP17735 454 aaPredicted RBP33.32■■■□□ 2.92
PBX1-217ENST00000559578 POLD1P28340 1107 aa33.32■■■□□ 2.92
PBX1-217ENST00000559578 HSP90AB2PQ58FF8 381 aa33.31■■■□□ 2.92
PBX1-217ENST00000559578 CCNL1Q9UK58 526 aaPredicted RBP33.31■■■□□ 2.92
PBX1-217ENST00000559578 FLT4P35916 1363 aa33.31■■■□□ 2.92
PBX1-217ENST00000559578 KIF24Q5T7B8 1368 aa33.31■■■□□ 2.92
PBX1-217ENST00000559578 TUBGCP6Q96RT7 1819 aa33.28■■■□□ 2.92
PBX1-217ENST00000559578 PCDH11XQ9BZA7 1347 aa33.27■■■□□ 2.92
PBX1-217ENST00000559578 PCDH11YQ9BZA8 1340 aa33.27■■■□□ 2.92
PBX1-217ENST00000559578 CHD4Q14839 1912 aa33.26■■■□□ 2.91
PBX1-217ENST00000559578 COL24A1Q17RW2 1714 aa33.25■■■□□ 2.91
PBX1-217ENST00000559578 KLHL34Q8N239 644 aa33.24■■■□□ 2.91
PBX1-217ENST00000559578 CARD14Q9BXL6 1004 aa33.24■■■□□ 2.91
PBX1-217ENST00000559578 NSD3Q9BZ95 1437 aa33.24■■■□□ 2.91
PBX1-217ENST00000559578 TIMELESSQ9UNS1 1208 aa33.23■■■□□ 2.91
PBX1-217ENST00000559578 ZNF784Q8NCA9 323 aaPredicted RBP33.21■■■□□ 2.91
PBX1-217ENST00000559578 HMGB2P26583 209 aaKnown RBP33.2■■■□□ 2.91
PBX1-217ENST00000559578 GPR162Q16538 588 aa33.2■■■□□ 2.91
PBX1-217ENST00000559578 EMILIN1Q9Y6C2 1016 aa33.19■■■□□ 2.9
PBX1-217ENST00000559578 MSH5O43196 834 aa33.18■■■□□ 2.9
PBX1-217ENST00000559578 UTRNP46939 3433 aa33.17■■■□□ 2.9
PBX1-217ENST00000559578 PPM1GO15355 546 aaPredicted RBP33.16■■■□□ 2.9
PBX1-217ENST00000559578 MPRIPQ6WCQ1 1025 aa33.16■■■□□ 2.9
PBX1-217ENST00000559578 CYP27B1O15528 508 aa33.15■■■□□ 2.9
PBX1-217ENST00000559578 C5P01031 1676 aa33.14■■■□□ 2.9
PBX1-217ENST00000559578 COL23A1Q86Y22 540 aaPredicted RBP33.14■■■□□ 2.9
PBX1-217ENST00000559578 PALLDQ8WX93 1383 aa33.13■■■□□ 2.89
PBX1-217ENST00000559578 PKD1L3Q7Z443 1732 aa33.11■■■□□ 2.89
PBX1-217ENST00000559578 PELP1Q8IZL8 1130 aaKnown RBP33.11■■■□□ 2.89
PBX1-217ENST00000559578 WASHC2AQ641Q2 1341 aa33.1■■■□□ 2.89
PBX1-217ENST00000559578 SMARCC1Q92922 1105 aaPredicted RBP33.1■■■□□ 2.89
PBX1-217ENST00000559578 ANKRD26Q9UPS8 1709 aa33.1■■■□□ 2.89
PBX1-217ENST00000559578 ITGB4P16144 1822 aa33.09■■■□□ 2.89
PBX1-217ENST00000559578 CLSPNQ9HAW4 1339 aa33.09■■■□□ 2.89
PBX1-217ENST00000559578 FLAD1Q8NFF5 587 aa33.09■■■□□ 2.89
PBX1-217ENST00000559578 SPG7Q9UQ90 795 aa33.09■■■□□ 2.89
PBX1-217ENST00000559578 NCAPD2Q15021 1401 aa33.09■■■□□ 2.89
PBX1-217ENST00000559578 MAP2P11137 1827 aaKnown RBP33.09■■■□□ 2.89
PBX1-217ENST00000559578 TAF1LQ8IZX4 1826 aa33.08■■■□□ 2.89
PBX1-217ENST00000559578 TOGARAM1Q9Y4F4 1720 aa33.08■■■□□ 2.89
PBX1-217ENST00000559578 NLGN2Q8NFZ4 835 aa33.07■■■□□ 2.88
PBX1-217ENST00000559578 NKX1-1Q15270 411 aaPredicted RBP33.05■■■□□ 2.88
PBX1-217ENST00000559578 POLR3GLQ9BT43 218 aa33.05■■■□□ 2.88
PBX1-217ENST00000559578 MSL1Q68DK7 614 aa33.04■■■□□ 2.88
PBX1-217ENST00000559578 PIGBQ92521 554 aa33.03■■■□□ 2.88
PBX1-217ENST00000559578 EYA1Q99502 592 aa33.03■■■□□ 2.88
PBX1-217ENST00000559578 PCGF6Q9BYE7 350 aa33.03■■■□□ 2.88
PBX1-217ENST00000559578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.02■■■□□ 2.88
PBX1-217ENST00000559578 POLKQ9UBT6 870 aa33.02■■■□□ 2.88
PBX1-217ENST00000559578 AK7Q96M32 723 aa33.01■■■□□ 2.87
PBX1-217ENST00000559578 C4BP0C0L5 1744 aa33■■■□□ 2.87
PBX1-217ENST00000559578 GRIN3BO60391 1043 aa32.97■■■□□ 2.87
PBX1-217ENST00000559578 TMOD3Q9NYL9 352 aa32.97■■■□□ 2.87
PBX1-217ENST00000559578 TNNT2P45379 298 aaPredicted RBP32.96■■■□□ 2.87
PBX1-217ENST00000559578 IFNL2Q8IZJ0 200 aa32.96■■■□□ 2.87
PBX1-217ENST00000559578 CD2APQ9Y5K6 639 aa32.95■■■□□ 2.87
PBX1-217ENST00000559578 LOC102724428A0A0B4J2F2 783 aa32.93■■■□□ 2.86
PBX1-217ENST00000559578 PHKG2P15735 406 aa32.93■■■□□ 2.86
PBX1-217ENST00000559578 YBX3P16989 372 aaKnown RBP eCLIP32.93■■■□□ 2.86
PBX1-217ENST00000559578 SIK1P57059 783 aa32.93■■■□□ 2.86
PBX1-217ENST00000559578 UBR3Q6ZT12 1888 aa32.93■■■□□ 2.86
PBX1-217ENST00000559578 EIF4G2P78344 907 aaKnown RBP eCLIP32.92■■■□□ 2.86
PBX1-217ENST00000559578 EIF4A2Q14240 407 aaKnown RBP32.92■■■□□ 2.86
PBX1-217ENST00000559578 PHF14O94880 888 aa32.91■■■□□ 2.86
PBX1-217ENST00000559578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.9■■■□□ 2.86
PBX1-217ENST00000559578 C1QTNF8P60827 252 aa32.9■■■□□ 2.86
PBX1-217ENST00000559578 PLEKHG2Q9H7P9 1386 aa32.89■■■□□ 2.86
PBX1-217ENST00000559578 SSFA2P28290 1259 aa32.88■■■□□ 2.85
PBX1-217ENST00000559578 AMIGO3Q86WK7 504 aa32.88■■■□□ 2.85
PBX1-217ENST00000559578 LINC00116Q8NCU8 138 aa32.88■■■□□ 2.85
PBX1-217ENST00000559578 ASAP1Q9ULH1 1129 aa32.88■■■□□ 2.85
PBX1-217ENST00000559578 GOLGB1Q14789 3259 aaKnown RBP32.86■■■□□ 2.85
PBX1-217ENST00000559578 ATP6V1AP38606 617 aa32.86■■■□□ 2.85
PBX1-217ENST00000559578 PANK3Q9H999 370 aa32.86■■■□□ 2.85
PBX1-217ENST00000559578 HSPA5P11021 654 aaKnown RBP32.85■■■□□ 2.85
PBX1-217ENST00000559578 IGSF1Q8N6C5 1336 aa32.84■■■□□ 2.85
PBX1-217ENST00000559578 GIGYF1O75420 1035 aaPredicted RBP32.84■■■□□ 2.85
PBX1-217ENST00000559578 SMIM5Q71RC9 77 aa32.84■■■□□ 2.85
PBX1-217ENST00000559578 ATG3Q9NT62 314 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms