RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 MFAP1P55081 439 aaKnown RBP19.39■□□□□ 0.69
CASC4-208ENST00000559151 ARID5BQ14865 1188 aa19.39■□□□□ 0.69
CASC4-208ENST00000559151 SWI5Q1ZZU3 235 aa19.39■□□□□ 0.69
CASC4-208ENST00000559151 RC3H1Q5TC82 1133 aaKnown RBP19.39■□□□□ 0.69
CASC4-208ENST00000559151 SFI1A8K8P3 1242 aa19.38■□□□□ 0.69
CASC4-208ENST00000559151 ERVH48-1M5A8F1 160 aa19.38■□□□□ 0.69
CASC4-208ENST00000559151 LIAT1Q6ZQX7 453 aa19.38■□□□□ 0.69
CASC4-208ENST00000559151 GNEQ9Y223 722 aaKnown RBP19.38■□□□□ 0.69
CASC4-208ENST00000559151 SEC13P55735 322 aa19.37■□□□□ 0.69
CASC4-208ENST00000559151 CD2BP2O95400 341 aaKnown RBP19.36■□□□□ 0.69
CASC4-208ENST00000559151 ATP2B4P23634 1241 aa19.36■□□□□ 0.69
CASC4-208ENST00000559151 SCTRP47872 440 aa19.36■□□□□ 0.69
CASC4-208ENST00000559151 EMID1Q96A84 441 aaPredicted RBP19.36■□□□□ 0.69
CASC4-208ENST00000559151 RBM19Q9Y4C8 960 aaKnown RBP19.36■□□□□ 0.69
CASC4-208ENST00000559151 TLL2Q9Y6L7 1015 aa19.36■□□□□ 0.69
CASC4-208ENST00000559151 MYCP01106 439 aaPredicted RBP19.34■□□□□ 0.69
CASC4-208ENST00000559151 TXNDC2Q86VQ3 553 aa19.34■□□□□ 0.69
CASC4-208ENST00000559151 FSHRP23945 695 aa19.33■□□□□ 0.68
CASC4-208ENST00000559151 CDK15Q96Q40 435 aa19.33■□□□□ 0.68
CASC4-208ENST00000559151 PRMT3O60678 531 aa19.3■□□□□ 0.68
CASC4-208ENST00000559151 CCER1Q8TC90 406 aaPredicted RBP19.3■□□□□ 0.68
CASC4-208ENST00000559151 TMPRSS4Q9NRS4 437 aa19.3■□□□□ 0.68
CASC4-208ENST00000559151 SND1Q7KZF4 910 aaKnown RBP eCLIP19.29■□□□□ 0.68
CASC4-208ENST00000559151 LGR5O75473 907 aa19.28■□□□□ 0.68
CASC4-208ENST00000559151 GRM5P41594 1212 aa19.28■□□□□ 0.68
CASC4-208ENST00000559151 ERVK-9P63128 1117 aa19.28■□□□□ 0.68
CASC4-208ENST00000559151 NPM2Q86SE8 214 aaKnown RBP19.28■□□□□ 0.68
CASC4-208ENST00000559151 SCNN1AP37088 669 aa19.27■□□□□ 0.68
CASC4-208ENST00000559151 RGS22Q8NE09 1264 aa19.27■□□□□ 0.68
CASC4-208ENST00000559151 PRIMPOLQ96LW4 560 aa19.27■□□□□ 0.68
CASC4-208ENST00000559151 SIAH2O43255 324 aa19.26■□□□□ 0.67
CASC4-208ENST00000559151 ARID4AP29374 1257 aaPredicted RBP19.26■□□□□ 0.67
CASC4-208ENST00000559151 CC2D2BQ6DHV5 1058 aa19.26■□□□□ 0.67
CASC4-208ENST00000559151 CYLDQ9NQC7 956 aa19.26■□□□□ 0.67
CASC4-208ENST00000559151 MTMR7Q9Y216 660 aa19.26■□□□□ 0.67
CASC4-208ENST00000559151 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.24■□□□□ 0.67
CASC4-208ENST00000559151 OCLNQ16625 522 aa19.23■□□□□ 0.67
CASC4-208ENST00000559151 MPNDQ8N594 471 aa19.23■□□□□ 0.67
CASC4-208ENST00000559151 HINFPQ9BQA5 517 aa19.23■□□□□ 0.67
CASC4-208ENST00000559151 OSBPL3Q9H4L5 887 aa19.23■□□□□ 0.67
CASC4-208ENST00000559151 ESF1Q9H501 851 aaKnown RBP19.23■□□□□ 0.67
CASC4-208ENST00000559151 ADH1CP00326 375 aa19.22■□□□□ 0.67
CASC4-208ENST00000559151 DHX9Q08211 1270 aaKnown RBP19.22■□□□□ 0.67
CASC4-208ENST00000559151 ZNF784Q8NCA9 323 aaPredicted RBP19.22■□□□□ 0.67
CASC4-208ENST00000559151 TSEN2Q8NCE0 465 aaKnown RBP19.22■□□□□ 0.67
CASC4-208ENST00000559151 CXXC1Q9P0U4 656 aaPredicted RBP19.22■□□□□ 0.67
CASC4-208ENST00000559151 SLC19A1P41440 591 aa19.21■□□□□ 0.67
CASC4-208ENST00000559151 MRGPRX2Q96LB1 330 aa19.21■□□□□ 0.67
CASC4-208ENST00000559151 ZNF358Q9NW07 568 aa19.21■□□□□ 0.67
CASC4-208ENST00000559151 WNT7AO00755 349 aa19.2■□□□□ 0.66
CASC4-208ENST00000559151 STAU1O95793 577 aaKnown RBP19.2■□□□□ 0.66
CASC4-208ENST00000559151 CCDC27Q2M243 656 aa19.2■□□□□ 0.66
CASC4-208ENST00000559151 SERPINB4P48594 390 aa19.19■□□□□ 0.66
CASC4-208ENST00000559151 CCDC116Q8IYX3 515 aa19.19■□□□□ 0.66
CASC4-208ENST00000559151 C1orf216Q8TAB5 229 aa19.19■□□□□ 0.66
CASC4-208ENST00000559151 TMEM229AB2RXF0 380 aa19.18■□□□□ 0.66
CASC4-208ENST00000559151 PPP1R26Q5T8A7 1209 aaPredicted RBP19.18■□□□□ 0.66
CASC4-208ENST00000559151 M0R2N6 131 aa19.17■□□□□ 0.66
CASC4-208ENST00000559151 SCNN1DP51172 638 aa19.16■□□□□ 0.66
CASC4-208ENST00000559151 MMRN1Q13201 1228 aa19.16■□□□□ 0.66
CASC4-208ENST00000559151 NR3C2P08235 984 aa19.15■□□□□ 0.66
CASC4-208ENST00000559151 NR5A1Q13285 461 aa19.15■□□□□ 0.66
CASC4-208ENST00000559151 LILRA1O75019 489 aa19.14■□□□□ 0.65
CASC4-208ENST00000559151 GDF10P55107 478 aa19.14■□□□□ 0.65
CASC4-208ENST00000559151 IFFO2Q5TF58 517 aa19.14■□□□□ 0.65
CASC4-208ENST00000559151 MYT1Q01538 1121 aa19.13■□□□□ 0.65
CASC4-208ENST00000559151 FOXD4L5Q5VV16 416 aaPredicted RBP19.13■□□□□ 0.65
CASC4-208ENST00000559151 TAS1R3Q7RTX0 852 aa19.13■□□□□ 0.65
CASC4-208ENST00000559151 FOXD4L4Q8WXT5 416 aaPredicted RBP19.13■□□□□ 0.65
CASC4-208ENST00000559151 SPRYD7Q5W111 196 aa19.12■□□□□ 0.65
CASC4-208ENST00000559151 WEE1P30291 646 aa19.11■□□□□ 0.65
CASC4-208ENST00000559151 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
CASC4-208ENST00000559151 SOWAHDA6NJG2 315 aa19.1■□□□□ 0.65
CASC4-208ENST00000559151 GAS2L2Q8NHY3 880 aa19.1■□□□□ 0.65
CASC4-208ENST00000559151 ETNK1Q9HBU6 452 aa19.1■□□□□ 0.65
CASC4-208ENST00000559151 ADD1P35611 737 aaKnown RBP19.09■□□□□ 0.65
CASC4-208ENST00000559151 MKNK1Q9BUB5 465 aa19.09■□□□□ 0.65
CASC4-208ENST00000559151 RANGAP1P46060 587 aaPredicted RBP19.08■□□□□ 0.64
CASC4-208ENST00000559151 CYP2U1Q7Z449 544 aa19.08■□□□□ 0.64
CASC4-208ENST00000559151 PURBQ96QR8 312 aaKnown RBP19.08■□□□□ 0.64
CASC4-208ENST00000559151 SERTAD1Q9UHV2 236 aa19.08■□□□□ 0.64
CASC4-208ENST00000559151 WASLO00401 505 aaPredicted RBP19.07■□□□□ 0.64
CASC4-208ENST00000559151 INHAP05111 366 aa19.07■□□□□ 0.64
CASC4-208ENST00000559151 FKBP5Q13451 457 aaPredicted RBP19.07■□□□□ 0.64
CASC4-208ENST00000559151 ZNF697Q5TEC3 545 aa19.07■□□□□ 0.64
CASC4-208ENST00000559151 TNS4Q8IZW8 715 aa19.06■□□□□ 0.64
CASC4-208ENST00000559151 PGPEP1Q9NXJ5 209 aa19.06■□□□□ 0.64
CASC4-208ENST00000559151 BACH1O14867 736 aa19.05■□□□□ 0.64
CASC4-208ENST00000559151 ALDH1A1P00352 501 aa19.05■□□□□ 0.64
CASC4-208ENST00000559151 FOXC1Q12948 553 aa19.04■□□□□ 0.64
CASC4-208ENST00000559151 EMILIN1Q9Y6C2 1016 aa19.04■□□□□ 0.64
CASC4-208ENST00000559151 ABL1P00519 1130 aa19.03■□□□□ 0.64
CASC4-208ENST00000559151 NNTQ13423 1086 aa19.03■□□□□ 0.64
CASC4-208ENST00000559151 CAPN12Q6ZSI9 719 aa19.03■□□□□ 0.64
CASC4-208ENST00000559151 RAB6BQ9NRW1 208 aa19.03■□□□□ 0.64
CASC4-208ENST00000559151 SEPT3Q9UH03 358 aa19.03■□□□□ 0.64
CASC4-208ENST00000559151 GNRH1P01148 92 aa19.02■□□□□ 0.64
CASC4-208ENST00000559151 ZNF598Q86UK7 904 aaKnown RBP19.02■□□□□ 0.64
CASC4-208ENST00000559151 IGFBP4P22692 258 aa19.01■□□□□ 0.63
CASC4-208ENST00000559151 EPHA4P54764 986 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms