RNA–Protein interactions for RNA: ENST00000559145.1

RORA-209, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-209ENST00000559145 SPATA31A5Q5VU36 1347 aa13.49□□□□□ -0.25
RORA-209ENST00000559145 SPATA31A7Q8IWB4 1347 aa13.49□□□□□ -0.25
RORA-209ENST00000559145 LMOD3Q0VAK6 560 aa13.49□□□□□ -0.25
RORA-209ENST00000559145 VPS72Q15906 364 aa13.49□□□□□ -0.25
RORA-209ENST00000559145 MTHFSDQ2M296 383 aaKnown RBP13.49□□□□□ -0.25
RORA-209ENST00000559145 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
RORA-209ENST00000559145 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.49□□□□□ -0.25
RORA-209ENST00000559145 OVOS2A0A0G2JMS6 1433 aa13.48□□□□□ -0.25
RORA-209ENST00000559145 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
RORA-209ENST00000559145 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
RORA-209ENST00000559145 THRAP3Q9Y2W1 955 aaKnown RBP13.48□□□□□ -0.25
RORA-209ENST00000559145 PLEKHG2Q9H7P9 1386 aa13.47□□□□□ -0.25
RORA-209ENST00000559145 A0A0G2JS52 829 aa13.47□□□□□ -0.25
RORA-209ENST00000559145 MYT1Q01538 1121 aa13.47□□□□□ -0.25
RORA-209ENST00000559145 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
RORA-209ENST00000559145 TRPC5Q9UL62 973 aaPredicted RBP13.47□□□□□ -0.25
RORA-209ENST00000559145 CDCA7Q9BWT1 371 aaPredicted RBP13.46□□□□□ -0.25
RORA-209ENST00000559145 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
RORA-209ENST00000559145 GNAT3A8MTJ3 354 aa13.45□□□□□ -0.26
RORA-209ENST00000559145 CCDC27Q2M243 656 aa13.45□□□□□ -0.26
RORA-209ENST00000559145 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
RORA-209ENST00000559145 ZCRB1Q8TBF4 217 aaKnown RBP13.45□□□□□ -0.26
RORA-209ENST00000559145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.45□□□□□ -0.26
RORA-209ENST00000559145 WNK3Q9BYP7 1800 aa13.45□□□□□ -0.26
RORA-209ENST00000559145 ATRNO75882 1429 aa13.45□□□□□ -0.26
RORA-209ENST00000559145 PCDH11XQ9BZA7 1347 aa13.44□□□□□ -0.26
RORA-209ENST00000559145 PCDH11YQ9BZA8 1340 aa13.44□□□□□ -0.26
RORA-209ENST00000559145 FAM98CQ17RN3 349 aaKnown RBP13.44□□□□□ -0.26
RORA-209ENST00000559145 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
RORA-209ENST00000559145 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
RORA-209ENST00000559145 WWC1Q8IX03 1113 aa13.44□□□□□ -0.26
RORA-209ENST00000559145 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
RORA-209ENST00000559145 TRIM35Q9UPQ4 493 aa13.44□□□□□ -0.26
RORA-209ENST00000559145 DISP2A7MBM2 1401 aa13.44□□□□□ -0.26
RORA-209ENST00000559145 PKD1L3Q7Z443 1732 aa13.44□□□□□ -0.26
RORA-209ENST00000559145 CALD1Q05682 793 aaKnown RBP13.43□□□□□ -0.26
RORA-209ENST00000559145 BARGINQ6ZT62 677 aa13.43□□□□□ -0.26
RORA-209ENST00000559145 IFNL2Q8IZJ0 200 aa13.43□□□□□ -0.26
RORA-209ENST00000559145 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
RORA-209ENST00000559145 GJD4Q96KN9 370 aaPredicted RBP13.43□□□□□ -0.26
RORA-209ENST00000559145 QTRT2Q9H974 415 aaKnown RBP13.43□□□□□ -0.26
RORA-209ENST00000559145 TNS2Q63HR2 1409 aa13.42□□□□□ -0.26
RORA-209ENST00000559145 EXOC5O00471 708 aa13.42□□□□□ -0.26
RORA-209ENST00000559145 HTATSF1O43719 755 aaKnown RBP13.42□□□□□ -0.26
RORA-209ENST00000559145 CENPBP07199 599 aaPredicted RBP13.42□□□□□ -0.26
RORA-209ENST00000559145 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
RORA-209ENST00000559145 PDE3BQ13370 1112 aa13.42□□□□□ -0.26
RORA-209ENST00000559145 DCTN1Q14203 1278 aa13.42□□□□□ -0.26
RORA-209ENST00000559145 DDB1Q16531 1140 aa13.42□□□□□ -0.26
RORA-209ENST00000559145 MCM10Q7L590 875 aa13.42□□□□□ -0.26
RORA-209ENST00000559145 ILDR1Q86SU0 546 aaPredicted RBP13.42□□□□□ -0.26
RORA-209ENST00000559145 WDR63Q8IWG1 891 aa13.42□□□□□ -0.26
RORA-209ENST00000559145 THUMPD2Q9BTF0 503 aaKnown RBP13.42□□□□□ -0.26
RORA-209ENST00000559145 GLI3P10071 1580 aa13.41□□□□□ -0.26
RORA-209ENST00000559145 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
RORA-209ENST00000559145 HSP90AB1P08238 724 aaKnown RBP13.41□□□□□ -0.26
RORA-209ENST00000559145 PHKG2P15735 406 aa13.41□□□□□ -0.26
RORA-209ENST00000559145 LAS1LQ9Y4W2 734 aaKnown RBP13.41□□□□□ -0.26
RORA-209ENST00000559145 ZNF521Q96K83 1311 aa13.4□□□□□ -0.26
RORA-209ENST00000559145 LRRC37A3O60309 1634 aa13.4□□□□□ -0.26
RORA-209ENST00000559145 CYP27B1O15528 508 aa13.4□□□□□ -0.26
RORA-209ENST00000559145 MPRIPQ6WCQ1 1025 aa13.4□□□□□ -0.26
RORA-209ENST00000559145 E9PSI1 815 aa13.39□□□□□ -0.27
RORA-209ENST00000559145 TEFQ10587 303 aa13.39□□□□□ -0.27
RORA-209ENST00000559145 IL16Q14005 1332 aa13.39□□□□□ -0.27
RORA-209ENST00000559145 CDCA7LQ96GN5 454 aa13.38□□□□□ -0.27
RORA-209ENST00000559145 MYH16Q9H6N6 1097 aa13.38□□□□□ -0.27
RORA-209ENST00000559145 SHANK3Q9BYB0 1731 aa13.38□□□□□ -0.27
RORA-209ENST00000559145 RNMTO43148 476 aaKnown RBP13.37□□□□□ -0.27
RORA-209ENST00000559145 GNAI1P63096 354 aa13.37□□□□□ -0.27
RORA-209ENST00000559145 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
RORA-209ENST00000559145 IL17REQ8NFR9 667 aa13.37□□□□□ -0.27
RORA-209ENST00000559145 DCAF5Q96JK2 942 aa13.37□□□□□ -0.27
RORA-209ENST00000559145 THSD7AQ9UPZ6 1657 aa13.37□□□□□ -0.27
RORA-209ENST00000559145 SLFN5Q08AF3 891 aa13.36□□□□□ -0.27
RORA-209ENST00000559145 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
RORA-209ENST00000559145 IFT57Q9NWB7 429 aa13.36□□□□□ -0.27
RORA-209ENST00000559145 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
RORA-209ENST00000559145 CABP4P57796 275 aa13.35□□□□□ -0.27
RORA-209ENST00000559145 SEPT12Q8IYM1 358 aa13.35□□□□□ -0.27
RORA-209ENST00000559145 TSR2Q969E8 191 aaKnown RBP13.35□□□□□ -0.27
RORA-209ENST00000559145 CEMIPQ8WUJ3 1361 aa13.34□□□□□ -0.27
RORA-209ENST00000559145 RXRBP28702 533 aa13.34□□□□□ -0.27
RORA-209ENST00000559145 TAF7Q15545 349 aaPredicted RBP13.34□□□□□ -0.27
RORA-209ENST00000559145 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
RORA-209ENST00000559145 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
RORA-209ENST00000559145 TSPYL4Q9UJ04 414 aa13.34□□□□□ -0.27
RORA-209ENST00000559145 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
RORA-209ENST00000559145 SCN11AQ9UI33 1791 aa13.33□□□□□ -0.28
RORA-209ENST00000559145 NKX1-1Q15270 411 aaPredicted RBP13.33□□□□□ -0.28
RORA-209ENST00000559145 MARCH10Q8NA82 808 aaPredicted RBP13.33□□□□□ -0.28
RORA-209ENST00000559145 ADAMTS7Q9UKP4 1686 aa13.33□□□□□ -0.28
RORA-209ENST00000559145 BTBD11A6QL63 1104 aa13.32□□□□□ -0.28
RORA-209ENST00000559145 ERVV-2B6SEH9 535 aa13.32□□□□□ -0.28
RORA-209ENST00000559145 ONECUT3O60422 494 aaPredicted RBP13.32□□□□□ -0.28
RORA-209ENST00000559145 DUSP27Q5VZP5 1158 aa13.32□□□□□ -0.28
RORA-209ENST00000559145 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
RORA-209ENST00000559145 MBIPQ9NS73 344 aa13.32□□□□□ -0.28
RORA-209ENST00000559145 MIS18AQ9NYP9 233 aa13.32□□□□□ -0.28
RORA-209ENST00000559145 MRC1P22897 1456 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms