RNA–Protein interactions for RNA: ENST00000559143.1

MFGE8-209, Transcript of milk fat globule-EGF factor 8 protein, humanhuman

TSL 3

Gene MFGE8, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFGE8-209ENST00000559143 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
MFGE8-209ENST00000559143 USHBP1Q8N6Y0 703 aa12.44□□□□□ -0.42
MFGE8-209ENST00000559143 MARCH10Q8NA82 808 aaPredicted RBP12.44□□□□□ -0.42
MFGE8-209ENST00000559143 NUDCQ9Y266 331 aa12.44□□□□□ -0.42
MFGE8-209ENST00000559143 PKD1L3Q7Z443 1732 aa12.44□□□□□ -0.42
MFGE8-209ENST00000559143 PCDH11XQ9BZA7 1347 aa12.43□□□□□ -0.42
MFGE8-209ENST00000559143 PCDH11YQ9BZA8 1340 aa12.43□□□□□ -0.42
MFGE8-209ENST00000559143 AMOTQ4VCS5 1084 aa12.43□□□□□ -0.42
MFGE8-209ENST00000559143 SPG7Q9UQ90 795 aa12.43□□□□□ -0.42
MFGE8-209ENST00000559143 CNGB1Q14028 1251 aaPredicted RBP12.42□□□□□ -0.42
MFGE8-209ENST00000559143 SULT6B1Q6IMI4 303 aa12.42□□□□□ -0.42
MFGE8-209ENST00000559143 SHANK3Q9BYB0 1731 aa12.41□□□□□ -0.42
MFGE8-209ENST00000559143 NKX1-1Q15270 411 aaPredicted RBP12.4□□□□□ -0.42
MFGE8-209ENST00000559143 PLEKHO1Q53GL0 409 aaPredicted RBP12.4□□□□□ -0.42
MFGE8-209ENST00000559143 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
MFGE8-209ENST00000559143 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
MFGE8-209ENST00000559143 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
MFGE8-209ENST00000559143 BCL11BQ9C0K0 894 aaPredicted RBP12.39□□□□□ -0.43
MFGE8-209ENST00000559143 CYP27B1O15528 508 aa12.38□□□□□ -0.43
MFGE8-209ENST00000559143 ANP32CO43423 234 aa12.38□□□□□ -0.43
MFGE8-209ENST00000559143 FCHSD2O94868 740 aa12.38□□□□□ -0.43
MFGE8-209ENST00000559143 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
MFGE8-209ENST00000559143 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
MFGE8-209ENST00000559143 DDX54Q8TDD1 881 aaKnown RBP12.38□□□□□ -0.43
MFGE8-209ENST00000559143 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
MFGE8-209ENST00000559143 U2SURPO15042 1029 aaKnown RBP12.37□□□□□ -0.43
MFGE8-209ENST00000559143 PHKG2P15735 406 aa12.37□□□□□ -0.43
MFGE8-209ENST00000559143 RSPH6AQ9H0K4 717 aa12.37□□□□□ -0.43
MFGE8-209ENST00000559143 PNNQ9H307 717 aaKnown RBP12.37□□□□□ -0.43
MFGE8-209ENST00000559143 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
MFGE8-209ENST00000559143 PLSCR1O15162 318 aa12.36□□□□□ -0.43
MFGE8-209ENST00000559143 TRIM37O94972 964 aa12.36□□□□□ -0.43
MFGE8-209ENST00000559143 HMOX1P09601 288 aa12.36□□□□□ -0.43
MFGE8-209ENST00000559143 U2AF1L5P0DN76 240 aaPredicted RBP12.36□□□□□ -0.43
MFGE8-209ENST00000559143 BAG6P46379 1132 aa12.36□□□□□ -0.43
MFGE8-209ENST00000559143 U2AF1Q01081 240 aaKnown RBP eCLIP12.36□□□□□ -0.43
MFGE8-209ENST00000559143 SBF2Q86WG5 1849 aa12.36□□□□□ -0.43
MFGE8-209ENST00000559143 RGPD3A6NKT7 1758 aaPredicted RBP12.35□□□□□ -0.43
MFGE8-209ENST00000559143 RGPD4Q7Z3J3 1758 aa12.35□□□□□ -0.43
MFGE8-209ENST00000559143 AKAP4Q5JQC9 854 aa12.35□□□□□ -0.43
MFGE8-209ENST00000559143 GAS2L2Q8NHY3 880 aa12.35□□□□□ -0.43
MFGE8-209ENST00000559143 C1orf141Q5JVX7 400 aa12.34□□□□□ -0.43
MFGE8-209ENST00000559143 ZNF530Q6P9A1 599 aaPredicted RBP12.34□□□□□ -0.43
MFGE8-209ENST00000559143 DCAF5Q96JK2 942 aa12.34□□□□□ -0.43
MFGE8-209ENST00000559143 EP400Q96L91 3159 aa12.33□□□□□ -0.44
MFGE8-209ENST00000559143 PRKAR2BP31323 418 aa12.33□□□□□ -0.44
MFGE8-209ENST00000559143 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
MFGE8-209ENST00000559143 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
MFGE8-209ENST00000559143 APBA3O96018 575 aa12.32□□□□□ -0.44
MFGE8-209ENST00000559143 NEFMP07197 916 aa12.32□□□□□ -0.44
MFGE8-209ENST00000559143 HMGB2P26583 209 aaKnown RBP12.32□□□□□ -0.44
MFGE8-209ENST00000559143 MTHFSDQ2M296 383 aaKnown RBP12.32□□□□□ -0.44
MFGE8-209ENST00000559143 KDM6AO15550 1401 aaPredicted RBP12.31□□□□□ -0.44
MFGE8-209ENST00000559143 KCNQ2O43526 872 aa12.31□□□□□ -0.44
MFGE8-209ENST00000559143 PRIM1P49642 420 aaKnown RBP12.31□□□□□ -0.44
MFGE8-209ENST00000559143 CAMKK2Q96RR4 588 aa12.31□□□□□ -0.44
MFGE8-209ENST00000559143 PLEKHF1Q96S99 279 aa12.31□□□□□ -0.44
MFGE8-209ENST00000559143 MRC1P22897 1456 aa12.31□□□□□ -0.44
MFGE8-209ENST00000559143 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
MFGE8-209ENST00000559143 HTATSF1O43719 755 aaKnown RBP12.3□□□□□ -0.44
MFGE8-209ENST00000559143 WDR43Q15061 677 aaKnown RBP eCLIP12.3□□□□□ -0.44
MFGE8-209ENST00000559143 ACSBG1Q96GR2 724 aa12.3□□□□□ -0.44
MFGE8-209ENST00000559143 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
MFGE8-209ENST00000559143 TOGARAM1Q9Y4F4 1720 aa12.29□□□□□ -0.44
MFGE8-209ENST00000559143 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
MFGE8-209ENST00000559143 SMARCC1Q92922 1105 aaPredicted RBP12.29□□□□□ -0.44
MFGE8-209ENST00000559143 BTAF1O14981 1849 aa12.28□□□□□ -0.44
MFGE8-209ENST00000559143 GNAT3A8MTJ3 354 aa12.28□□□□□ -0.44
MFGE8-209ENST00000559143 EN1Q05925 392 aaPredicted RBP12.28□□□□□ -0.44
MFGE8-209ENST00000559143 SLC27A3Q5K4L6 730 aa12.28□□□□□ -0.44
MFGE8-209ENST00000559143 PTF1AQ7RTS3 328 aa12.28□□□□□ -0.44
MFGE8-209ENST00000559143 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
MFGE8-209ENST00000559143 TMOD3Q9NYL9 352 aa12.28□□□□□ -0.44
MFGE8-209ENST00000559143 RREB1Q92766 1687 aa12.28□□□□□ -0.44
MFGE8-209ENST00000559143 CEMIPQ8WUJ3 1361 aa12.28□□□□□ -0.44
MFGE8-209ENST00000559143 RNMTO43148 476 aaKnown RBP12.27□□□□□ -0.45
MFGE8-209ENST00000559143 SYTL4Q96C24 671 aaPredicted RBP12.27□□□□□ -0.45
MFGE8-209ENST00000559143 MAPK8IP3Q9UPT6 1336 aa12.27□□□□□ -0.45
MFGE8-209ENST00000559143 SCN11AQ9UI33 1791 aa12.26□□□□□ -0.45
MFGE8-209ENST00000559143 CABP4P57796 275 aa12.26□□□□□ -0.45
MFGE8-209ENST00000559143 EZH2Q15910 746 aaKnown RBP12.26□□□□□ -0.45
MFGE8-209ENST00000559143 PIGBQ92521 554 aa12.26□□□□□ -0.45
MFGE8-209ENST00000559143 SLC52A2Q9HAB3 445 aa12.26□□□□□ -0.45
MFGE8-209ENST00000559143 ITGB4P16144 1822 aa12.25□□□□□ -0.45
MFGE8-209ENST00000559143 NFE2L2Q16236 605 aa12.25□□□□□ -0.45
MFGE8-209ENST00000559143 TXNRD1Q16881 649 aa12.25□□□□□ -0.45
MFGE8-209ENST00000559143 MPRIPQ6WCQ1 1025 aa12.25□□□□□ -0.45
MFGE8-209ENST00000559143 PNISRQ8TF01 805 aaKnown RBP12.25□□□□□ -0.45
MFGE8-209ENST00000559143 RUNDC1Q96C34 613 aa12.25□□□□□ -0.45
MFGE8-209ENST00000559143 MRS2Q9HD23 443 aa12.25□□□□□ -0.45
MFGE8-209ENST00000559143 ADAMTS8Q9UP79 889 aa12.25□□□□□ -0.45
MFGE8-209ENST00000559143 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
MFGE8-209ENST00000559143 CCER2I3L3R5 266 aa12.24□□□□□ -0.45
MFGE8-209ENST00000559143 LY75O60449 1722 aa12.24□□□□□ -0.45
MFGE8-209ENST00000559143 LMOD3Q0VAK6 560 aa12.24□□□□□ -0.45
MFGE8-209ENST00000559143 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
MFGE8-209ENST00000559143 PROM2Q8N271 834 aa12.24□□□□□ -0.45
MFGE8-209ENST00000559143 IL17REQ8NFR9 667 aa12.24□□□□□ -0.45
MFGE8-209ENST00000559143 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
MFGE8-209ENST00000559143 ZNF831Q5JPB2 1677 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms