RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 GJD4Q96KN9 370 aaPredicted RBP20.84■□□□□ 0.93
CDC42BPB-204ENST00000559043 TRPC5Q9UL62 973 aaPredicted RBP20.83■□□□□ 0.93
CDC42BPB-204ENST00000559043 RUNDC1Q96C34 613 aa20.83■□□□□ 0.92
CDC42BPB-204ENST00000559043 GLI3P10071 1580 aa20.82■□□□□ 0.92
CDC42BPB-204ENST00000559043 IL2RBP14784 551 aa20.81■□□□□ 0.92
CDC42BPB-204ENST00000559043 RAPGEF4Q8WZA2 1011 aa20.81■□□□□ 0.92
CDC42BPB-204ENST00000559043 DISP2A7MBM2 1401 aa20.81■□□□□ 0.92
CDC42BPB-204ENST00000559043 APAF1O14727 1248 aa20.81■□□□□ 0.92
CDC42BPB-204ENST00000559043 FAM98CQ17RN3 349 aaKnown RBP20.81■□□□□ 0.92
CDC42BPB-204ENST00000559043 MTHFSDQ2M296 383 aaKnown RBP20.81■□□□□ 0.92
CDC42BPB-204ENST00000559043 ZNF772Q68DY9 489 aaPredicted RBP20.8■□□□□ 0.92
CDC42BPB-204ENST00000559043 POTEAQ6S8J7 498 aa20.8■□□□□ 0.92
CDC42BPB-204ENST00000559043 BARGINQ6ZT62 677 aa20.8■□□□□ 0.92
CDC42BPB-204ENST00000559043 THRAP3Q9Y2W1 955 aaKnown RBP20.8■□□□□ 0.92
CDC42BPB-204ENST00000559043 RRP7AQ9Y3A4 280 aaKnown RBP20.79■□□□□ 0.92
CDC42BPB-204ENST00000559043 TATP17735 454 aaPredicted RBP20.79■□□□□ 0.92
CDC42BPB-204ENST00000559043 PDE3BQ13370 1112 aa20.78■□□□□ 0.92
CDC42BPB-204ENST00000559043 OVOS2A0A0G2JMS6 1433 aa20.78■□□□□ 0.92
CDC42BPB-204ENST00000559043 PNNQ9H307 717 aaKnown RBP20.77■□□□□ 0.92
CDC42BPB-204ENST00000559043 ONECUT3O60422 494 aaPredicted RBP20.76■□□□□ 0.91
CDC42BPB-204ENST00000559043 TMPOP42166 694 aaKnown RBP20.76■□□□□ 0.91
CDC42BPB-204ENST00000559043 NEUROD2Q15784 382 aa20.76■□□□□ 0.91
CDC42BPB-204ENST00000559043 PLEKHO1Q53GL0 409 aaPredicted RBP20.75■□□□□ 0.91
CDC42BPB-204ENST00000559043 SALL2Q9Y467 1007 aaPredicted RBP20.75■□□□□ 0.91
CDC42BPB-204ENST00000559043 MAPK8IP3Q9UPT6 1336 aa20.75■□□□□ 0.91
CDC42BPB-204ENST00000559043 CYP27B1O15528 508 aa20.74■□□□□ 0.91
CDC42BPB-204ENST00000559043 ZCRB1Q8TBF4 217 aaKnown RBP20.74■□□□□ 0.91
CDC42BPB-204ENST00000559043 PHF23Q9BUL5 403 aaPredicted RBP20.74■□□□□ 0.91
CDC42BPB-204ENST00000559043 WNK3Q9BYP7 1800 aa20.74■□□□□ 0.91
CDC42BPB-204ENST00000559043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.74■□□□□ 0.913e-7■■■■□ 22.7
CDC42BPB-204ENST00000559043 NFE2L2Q16236 605 aa20.74■□□□□ 0.91
CDC42BPB-204ENST00000559043 RBM6P78332 1123 aaKnown RBP20.72■□□□□ 0.91
CDC42BPB-204ENST00000559043 AMOTQ4VCS5 1084 aa20.72■□□□□ 0.91
CDC42BPB-204ENST00000559043 PARP4Q9UKK3 1724 aaKnown RBP20.72■□□□□ 0.91
CDC42BPB-204ENST00000559043 RIPK4P57078 832 aa20.72■□□□□ 0.91
CDC42BPB-204ENST00000559043 ZNF530Q6P9A1 599 aaPredicted RBP20.72■□□□□ 0.91
CDC42BPB-204ENST00000559043 CDCA7Q9BWT1 371 aaPredicted RBP20.72■□□□□ 0.91
CDC42BPB-204ENST00000559043 TRIM35Q9UPQ4 493 aa20.72■□□□□ 0.91
CDC42BPB-204ENST00000559043 SPG7Q9UQ90 795 aa20.72■□□□□ 0.91
CDC42BPB-204ENST00000559043 PKD1L3Q7Z443 1732 aa20.71■□□□□ 0.91
CDC42BPB-204ENST00000559043 EXOC5O00471 708 aa20.71■□□□□ 0.91
CDC42BPB-204ENST00000559043 DDX54Q8TDD1 881 aaKnown RBP20.71■□□□□ 0.91
CDC42BPB-204ENST00000559043 SHANK3Q9BYB0 1731 aa20.71■□□□□ 0.91
CDC42BPB-204ENST00000559043 NEFMP07197 916 aa20.7■□□□□ 0.9
CDC42BPB-204ENST00000559043 SEPT12Q8IYM1 358 aa20.7■□□□□ 0.9
CDC42BPB-204ENST00000559043 THSD7AQ9UPZ6 1657 aa20.7■□□□□ 0.9
CDC42BPB-204ENST00000559043 DDB1Q16531 1140 aa20.7■□□□□ 0.9
CDC42BPB-204ENST00000559043 GAS2L2Q8NHY3 880 aa20.7■□□□□ 0.9
CDC42BPB-204ENST00000559043 DLG5Q8TDM6 1919 aa20.7■□□□□ 0.9
CDC42BPB-204ENST00000559043 PHKG2P15735 406 aa20.69■□□□□ 0.9
CDC42BPB-204ENST00000559043 RXRBP28702 533 aa20.69■□□□□ 0.9
CDC42BPB-204ENST00000559043 DCTN1Q14203 1278 aa20.69■□□□□ 0.9
CDC42BPB-204ENST00000559043 MARCH10Q8NA82 808 aaPredicted RBP20.68■□□□□ 0.9
CDC42BPB-204ENST00000559043 LRRC37A3O60309 1634 aa20.68■□□□□ 0.9
CDC42BPB-204ENST00000559043 A0A0G2JS52 829 aa20.68■□□□□ 0.9
CDC42BPB-204ENST00000559043 MYT1Q01538 1121 aa20.68■□□□□ 0.9
CDC42BPB-204ENST00000559043 B4GALNT3Q6L9W6 998 aa20.68■□□□□ 0.9
CDC42BPB-204ENST00000559043 THUMPD2Q9BTF0 503 aaKnown RBP20.68■□□□□ 0.9
CDC42BPB-204ENST00000559043 LGR6Q9HBX8 967 aa20.68■□□□□ 0.9
CDC42BPB-204ENST00000559043 PLEKHG2Q9H7P9 1386 aa20.68■□□□□ 0.9
CDC42BPB-204ENST00000559043 AKAP4Q5JQC9 854 aa20.67■□□□□ 0.9
CDC42BPB-204ENST00000559043 IL17REQ8NFR9 667 aa20.67■□□□□ 0.9
CDC42BPB-204ENST00000559043 RBM19Q9Y4C8 960 aaKnown RBP20.67■□□□□ 0.9
CDC42BPB-204ENST00000559043 GNAT3A8MTJ3 354 aa20.66■□□□□ 0.9
CDC42BPB-204ENST00000559043 MPRIPQ6WCQ1 1025 aa20.66■□□□□ 0.9
CDC42BPB-204ENST00000559043 MCM10Q7L590 875 aa20.66■□□□□ 0.9
CDC42BPB-204ENST00000559043 IFNL2Q8IZJ0 200 aa20.66■□□□□ 0.9
CDC42BPB-204ENST00000559043 TNS2Q63HR2 1409 aa20.66■□□□□ 0.9
CDC42BPB-204ENST00000559043 PCDH11XQ9BZA7 1347 aa20.66■□□□□ 0.9
CDC42BPB-204ENST00000559043 PCDH11YQ9BZA8 1340 aa20.66■□□□□ 0.9
CDC42BPB-204ENST00000559043 FAM182BQ5T319 152 aa20.65■□□□□ 0.9
CDC42BPB-204ENST00000559043 WWC1Q8IX03 1113 aa20.65■□□□□ 0.9
CDC42BPB-204ENST00000559043 MAP3K5Q99683 1374 aa20.65■□□□□ 0.9
CDC42BPB-204ENST00000559043 C1orf141Q5JVX7 400 aa20.65■□□□□ 0.9
CDC42BPB-204ENST00000559043 NKX1-1Q15270 411 aaPredicted RBP20.64■□□□□ 0.89
CDC42BPB-204ENST00000559043 RCAN3Q9UKA8 241 aa20.64■□□□□ 0.89
CDC42BPB-204ENST00000559043 ZNF521Q96K83 1311 aa20.64■□□□□ 0.89
CDC42BPB-204ENST00000559043 KDM6AO15550 1401 aaPredicted RBP20.63■□□□□ 0.89
CDC42BPB-204ENST00000559043 RRP1P56182 461 aaKnown RBP20.63■□□□□ 0.89
CDC42BPB-204ENST00000559043 CCDC27Q2M243 656 aa20.63■□□□□ 0.89
CDC42BPB-204ENST00000559043 NCBP3Q53F19 620 aaKnown RBP20.62■□□□□ 0.89
CDC42BPB-204ENST00000559043 CDCA7LQ96GN5 454 aa20.62■□□□□ 0.89
CDC42BPB-204ENST00000559043 BRWD3Q6RI45 1802 aa20.62■□□□□ 0.89
CDC42BPB-204ENST00000559043 RNMTO43148 476 aaKnown RBP20.61■□□□□ 0.89
CDC42BPB-204ENST00000559043 RGS12O14924 1447 aa20.61■□□□□ 0.89
CDC42BPB-204ENST00000559043 HTATSF1O43719 755 aaKnown RBP20.61■□□□□ 0.89
CDC42BPB-204ENST00000559043 SPINK5Q9NQ38 1064 aaPredicted RBP20.6■□□□□ 0.89
CDC42BPB-204ENST00000559043 CEMIPQ8WUJ3 1361 aa20.6■□□□□ 0.89
CDC42BPB-204ENST00000559043 DCAF5Q96JK2 942 aa20.59■□□□□ 0.89
CDC42BPB-204ENST00000559043 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-204ENST00000559043 NGEFQ8N5V2 710 aa20.58■□□□□ 0.89
CDC42BPB-204ENST00000559043 ADAMTS7Q9UKP4 1686 aa20.58■□□□□ 0.89
CDC42BPB-204ENST00000559043 EP400Q96L91 3159 aa20.57■□□□□ 0.88
CDC42BPB-204ENST00000559043 LMOD3Q0VAK6 560 aa20.57■□□□□ 0.88
CDC42BPB-204ENST00000559043 KRT27Q7Z3Y8 459 aa20.57■□□□□ 0.88
CDC42BPB-204ENST00000559043 VIRMAQ69YN4 1812 aaKnown RBP20.57■□□□□ 0.88
CDC42BPB-204ENST00000559043 HSP90AB1P08238 724 aaKnown RBP20.56■□□□□ 0.88
CDC42BPB-204ENST00000559043 SCN11AQ9UI33 1791 aa20.56■□□□□ 0.88
CDC42BPB-204ENST00000559043 TOGARAM1Q9Y4F4 1720 aa20.56■□□□□ 0.88
CDC42BPB-204ENST00000559043 PTF1AQ7RTS3 328 aa20.55■□□□□ 0.88
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