RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
TPM1-216ENST00000558910 TNNT2P45379 298 aaPredicted RBP16.59■□□□□ 0.25
TPM1-216ENST00000558910 EN1Q05925 392 aaPredicted RBP16.59■□□□□ 0.25
TPM1-216ENST00000558910 CNGB1Q14028 1251 aaPredicted RBP16.59■□□□□ 0.25
TPM1-216ENST00000558910 DDB1Q16531 1140 aa16.59■□□□□ 0.25
TPM1-216ENST00000558910 CCDC125Q86Z20 511 aa16.59■□□□□ 0.25
TPM1-216ENST00000558910 THRAP3Q9Y2W1 955 aaKnown RBP16.59■□□□□ 0.25
TPM1-216ENST00000558910 MAP3K19Q56UN5 1328 aa16.59■□□□□ 0.25
TPM1-216ENST00000558910 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
TPM1-216ENST00000558910 CARD10Q9BWT7 1032 aa16.58■□□□□ 0.24
TPM1-216ENST00000558910 BAG6P46379 1132 aa16.57■□□□□ 0.24
TPM1-216ENST00000558910 FAM196AQ6ZSG2 479 aa16.57■□□□□ 0.24
TPM1-216ENST00000558910 KLHL34Q8N239 644 aa16.57■□□□□ 0.24
TPM1-216ENST00000558910 PANK3Q9H999 370 aa16.57■□□□□ 0.24
TPM1-216ENST00000558910 LTN1O94822 1766 aa16.56■□□□□ 0.24
TPM1-216ENST00000558910 ERBB3P21860 1342 aa16.56■□□□□ 0.24
TPM1-216ENST00000558910 IP6K1Q92551 441 aa16.56■□□□□ 0.24
TPM1-216ENST00000558910 APBA3O96018 575 aa16.55■□□□□ 0.24
TPM1-216ENST00000558910 HOXC9P31274 260 aa16.55■□□□□ 0.24
TPM1-216ENST00000558910 USHBP1Q8N6Y0 703 aa16.55■□□□□ 0.24
TPM1-216ENST00000558910 MYOM1P52179 1685 aa16.55■□□□□ 0.24
TPM1-216ENST00000558910 EXOC5O00471 708 aa16.54■□□□□ 0.24
TPM1-216ENST00000558910 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
TPM1-216ENST00000558910 EZH2Q15910 746 aaKnown RBP16.53■□□□□ 0.24
TPM1-216ENST00000558910 EMILIN1Q9Y6C2 1016 aa16.53■□□□□ 0.24
TPM1-216ENST00000558910 CGNL1Q0VF96 1302 aa16.52■□□□□ 0.24
TPM1-216ENST00000558910 PSDA5PKW4 1024 aaPredicted RBP16.52■□□□□ 0.24
TPM1-216ENST00000558910 MARCH10Q8NA82 808 aaPredicted RBP16.52■□□□□ 0.24
TPM1-216ENST00000558910 USP54Q70EL1 1684 aa16.51■□□□□ 0.23
TPM1-216ENST00000558910 IL2RBP14784 551 aa16.51■□□□□ 0.23
TPM1-216ENST00000558910 HSP90AB2PQ58FF8 381 aa16.51■□□□□ 0.23
TPM1-216ENST00000558910 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
TPM1-216ENST00000558910 IFNLR1Q8IU57 520 aaPredicted RBP16.51■□□□□ 0.23
TPM1-216ENST00000558910 ACSBG1Q96GR2 724 aa16.51■□□□□ 0.23
TPM1-216ENST00000558910 CCDC7Q96M83 1385 aa16.51■□□□□ 0.23
TPM1-216ENST00000558910 KIF20BQ96Q89 1820 aa16.5■□□□□ 0.23
TPM1-216ENST00000558910 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
TPM1-216ENST00000558910 MS4A3Q96HJ5 214 aa16.5■□□□□ 0.23
TPM1-216ENST00000558910 KIF7Q2M1P5 1343 aa16.49■□□□□ 0.23
TPM1-216ENST00000558910 FAM212AQ96EL1 285 aa16.49■□□□□ 0.23
TPM1-216ENST00000558910 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
TPM1-216ENST00000558910 LRRC37A3O60309 1634 aa16.48■□□□□ 0.23
TPM1-216ENST00000558910 DCBLD2Q96PD2 775 aa16.48■□□□□ 0.23
TPM1-216ENST00000558910 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
TPM1-216ENST00000558910 OVOS2A0A0G2JMS6 1433 aa16.47■□□□□ 0.23
TPM1-216ENST00000558910 NBPF6Q5VWK0 638 aa16.47■□□□□ 0.23
TPM1-216ENST00000558910 KIF12Q96FN5 646 aa16.47■□□□□ 0.23
TPM1-216ENST00000558910 NBPF4Q96M43 638 aa16.47■□□□□ 0.23
TPM1-216ENST00000558910 DISP2A7MBM2 1401 aa16.46■□□□□ 0.23
TPM1-216ENST00000558910 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.23
TPM1-216ENST00000558910 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
TPM1-216ENST00000558910 KCNQ2O43526 872 aa16.45■□□□□ 0.22
TPM1-216ENST00000558910 MORC1Q86VD1 984 aa16.45■□□□□ 0.22
TPM1-216ENST00000558910 ABCC6O95255 1503 aa16.45■□□□□ 0.22
TPM1-216ENST00000558910 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
TPM1-216ENST00000558910 R3HDM1Q15032 1099 aaKnown RBP16.44■□□□□ 0.22
TPM1-216ENST00000558910 CAMKK2Q96RR4 588 aa16.44■□□□□ 0.22
TPM1-216ENST00000558910 SRCAPQ6ZRS2 3230 aa16.44■□□□□ 0.22
TPM1-216ENST00000558910 WNK3Q9BYP7 1800 aa16.43■□□□□ 0.22
TPM1-216ENST00000558910 RTL1A6NKG5 1358 aa16.43■□□□□ 0.22
TPM1-216ENST00000558910 FLT4P35916 1363 aa16.43■□□□□ 0.22
TPM1-216ENST00000558910 MAP3K13O43283 966 aa16.43■□□□□ 0.22
TPM1-216ENST00000558910 DCAF8Q5TAQ9 597 aa16.43■□□□□ 0.22
TPM1-216ENST00000558910 SYTL4Q96C24 671 aaPredicted RBP16.43■□□□□ 0.22
TPM1-216ENST00000558910 RGPD2P0DJD1 1756 aa16.43■□□□□ 0.22
TPM1-216ENST00000558910 TNS2Q63HR2 1409 aa16.43■□□□□ 0.22
TPM1-216ENST00000558910 PEAK1Q9H792 1746 aa16.42■□□□□ 0.22
TPM1-216ENST00000558910 CC2D1BQ5T0F9 858 aaKnown RBP16.42■□□□□ 0.22
TPM1-216ENST00000558910 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
TPM1-216ENST00000558910 POLKQ9UBT6 870 aa16.42■□□□□ 0.22
TPM1-216ENST00000558910 TNS1Q9HBL0 1735 aaKnown RBP16.42■□□□□ 0.22
TPM1-216ENST00000558910 KAT6BQ8WYB5 2073 aa16.41■□□□□ 0.22
TPM1-216ENST00000558910 INSRP06213 1382 aa16.4■□□□□ 0.22
TPM1-216ENST00000558910 TATP17735 454 aaPredicted RBP16.4■□□□□ 0.22
TPM1-216ENST00000558910 ZCRB1Q8TBF4 217 aaKnown RBP16.4■□□□□ 0.22
TPM1-216ENST00000558910 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
TPM1-216ENST00000558910 MEGF6O75095 1541 aa16.4■□□□□ 0.22
TPM1-216ENST00000558910 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.21
TPM1-216ENST00000558910 EIF4A2Q14240 407 aaKnown RBP16.37■□□□□ 0.21
TPM1-216ENST00000558910 EYA1Q99502 592 aa16.37■□□□□ 0.21
TPM1-216ENST00000558910 NBPF14Q5TI25 921 aa16.36■□□□□ 0.21
TPM1-216ENST00000558910 MAP2P11137 1827 aaKnown RBP16.35■□□□□ 0.21
TPM1-216ENST00000558910 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
TPM1-216ENST00000558910 SPOCK2Q92563 424 aa16.35■□□□□ 0.21
TPM1-216ENST00000558910 FAM208AQ9UK61 1670 aaKnown RBP16.34■□□□□ 0.21
TPM1-216ENST00000558910 AMER1Q5JTC6 1135 aaPredicted RBP16.34■□□□□ 0.21
TPM1-216ENST00000558910 SBF2Q86WG5 1849 aa16.33■□□□□ 0.21
TPM1-216ENST00000558910 KCNQ4P56696 695 aa16.33■□□□□ 0.2
TPM1-216ENST00000558910 TXNRD1Q16881 649 aa16.33■□□□□ 0.2
TPM1-216ENST00000558910 TRPC6Q9Y210 931 aa16.33■□□□□ 0.2
TPM1-216ENST00000558910 NSD2O96028 1365 aa16.32■□□□□ 0.2
TPM1-216ENST00000558910 KIF24Q5T7B8 1368 aa16.32■□□□□ 0.2
TPM1-216ENST00000558910 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
TPM1-216ENST00000558910 ANKRD26Q9UPS8 1709 aa16.31■□□□□ 0.2
TPM1-216ENST00000558910 PLSCR1O15162 318 aa16.31■□□□□ 0.2
TPM1-216ENST00000558910 PYGBP11216 843 aa16.31■□□□□ 0.2
TPM1-216ENST00000558910 PCDHB13Q9Y5F0 798 aa16.31■□□□□ 0.2
TPM1-216ENST00000558910 PARD3Q8TEW0 1356 aa16.3■□□□□ 0.2
TPM1-216ENST00000558910 PCDH11XQ9BZA7 1347 aa16.29■□□□□ 0.2
TPM1-216ENST00000558910 PCDH11YQ9BZA8 1340 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms