RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 NBPF14Q5TI25 921 aa23.56■■□□□ 1.36
LRRC28-210ENST00000558879 PROM2Q8N271 834 aa23.56■■□□□ 1.36
LRRC28-210ENST00000558879 HSP90AB2PQ58FF8 381 aa23.55■■□□□ 1.36
LRRC28-210ENST00000558879 NBPF6Q5VWK0 638 aa23.55■■□□□ 1.36
LRRC28-210ENST00000558879 NBPF4Q96M43 638 aa23.55■■□□□ 1.36
LRRC28-210ENST00000558879 ANO8Q9HCE9 1232 aaPredicted RBP23.55■■□□□ 1.36
LRRC28-210ENST00000558879 EMILIN1Q9Y6C2 1016 aa23.55■■□□□ 1.36
LRRC28-210ENST00000558879 ACSBG1Q96GR2 724 aa23.53■■□□□ 1.36
LRRC28-210ENST00000558879 POLR3GLQ9BT43 218 aa23.52■■□□□ 1.36
LRRC28-210ENST00000558879 NSD2O96028 1365 aa23.52■■□□□ 1.36
LRRC28-210ENST00000558879 TXNRD1Q16881 649 aa23.51■■□□□ 1.35
LRRC28-210ENST00000558879 TAF1LQ8IZX4 1826 aa23.51■■□□□ 1.35
LRRC28-210ENST00000558879 USHBP1Q8N6Y0 703 aa23.5■■□□□ 1.35
LRRC28-210ENST00000558879 WASHC2AQ641Q2 1341 aa23.49■■□□□ 1.35
LRRC28-210ENST00000558879 COL24A1Q17RW2 1714 aa23.48■■□□□ 1.35
LRRC28-210ENST00000558879 ZCRB1Q8TBF4 217 aaKnown RBP23.48■■□□□ 1.35
LRRC28-210ENST00000558879 DDX54Q8TDD1 881 aaKnown RBP23.48■■□□□ 1.35
LRRC28-210ENST00000558879 PANK3Q9H999 370 aa23.47■■□□□ 1.35
LRRC28-210ENST00000558879 C5P01031 1676 aa23.46■■□□□ 1.35
LRRC28-210ENST00000558879 POLKQ9UBT6 870 aa23.46■■□□□ 1.35
LRRC28-210ENST00000558879 RAPGEF4Q8WZA2 1011 aa23.45■■□□□ 1.34
LRRC28-210ENST00000558879 TATP17735 454 aaPredicted RBP23.44■■□□□ 1.34
LRRC28-210ENST00000558879 KIF7Q2M1P5 1343 aa23.43■■□□□ 1.34
LRRC28-210ENST00000558879 PCDH11XQ9BZA7 1347 aa23.43■■□□□ 1.34
LRRC28-210ENST00000558879 PCDH11YQ9BZA8 1340 aa23.43■■□□□ 1.34
LRRC28-210ENST00000558879 PLEKHG2Q9H7P9 1386 aa23.41■■□□□ 1.34
LRRC28-210ENST00000558879 VIRMAQ69YN4 1812 aaKnown RBP23.41■■□□□ 1.34
LRRC28-210ENST00000558879 SLC15A2Q16348 729 aa23.41■■□□□ 1.34
LRRC28-210ENST00000558879 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
LRRC28-210ENST00000558879 LRRC4BQ9NT99 713 aa23.39■■□□□ 1.33
LRRC28-210ENST00000558879 STK32BQ9NY57 414 aa23.39■■□□□ 1.33
LRRC28-210ENST00000558879 PRIM1P49642 420 aaKnown RBP23.38■■□□□ 1.33
LRRC28-210ENST00000558879 EYA1Q99502 592 aa23.38■■□□□ 1.33
LRRC28-210ENST00000558879 PDGFDQ9GZP0 370 aaPredicted RBP23.38■■□□□ 1.33
LRRC28-210ENST00000558879 SPON1Q9HCB6 807 aa23.38■■□□□ 1.33
LRRC28-210ENST00000558879 CYP27B1O15528 508 aa23.36■■□□□ 1.33
LRRC28-210ENST00000558879 TNNT2P45379 298 aaPredicted RBP23.36■■□□□ 1.33
LRRC28-210ENST00000558879 EIF4A2Q14240 407 aaKnown RBP23.36■■□□□ 1.33
LRRC28-210ENST00000558879 SLC27A3Q5K4L6 730 aa23.36■■□□□ 1.33
LRRC28-210ENST00000558879 IGSF1Q8N6C5 1336 aa23.35■■□□□ 1.33
LRRC28-210ENST00000558879 SYTL4Q96C24 671 aaPredicted RBP23.35■■□□□ 1.33
LRRC28-210ENST00000558879 ZNF827Q17R98 1081 aa23.34■■□□□ 1.33
LRRC28-210ENST00000558879 AMER1Q5JTC6 1135 aaPredicted RBP23.34■■□□□ 1.33
LRRC28-210ENST00000558879 UBR3Q6ZT12 1888 aa23.33■■□□□ 1.33
LRRC28-210ENST00000558879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.32■■□□□ 1.321e-7■■■□□ 18.9
LRRC28-210ENST00000558879 KNSTRNQ9Y448 316 aa23.32■■□□□ 1.32
LRRC28-210ENST00000558879 C4BP0C0L5 1744 aa23.31■■□□□ 1.32
LRRC28-210ENST00000558879 AKT1S1Q96B36 256 aa23.31■■□□□ 1.32
LRRC28-210ENST00000558879 SCN11AQ9UI33 1791 aa23.31■■□□□ 1.32
LRRC28-210ENST00000558879 ZNF831Q5JPB2 1677 aa23.31■■□□□ 1.32
LRRC28-210ENST00000558879 NKX1-1Q15270 411 aaPredicted RBP23.3■■□□□ 1.32
LRRC28-210ENST00000558879 MORC1Q86VD1 984 aa23.3■■□□□ 1.32
LRRC28-210ENST00000558879 PTGER2P43116 358 aa23.29■■□□□ 1.32
LRRC28-210ENST00000558879 PER1O15534 1290 aaPredicted RBP23.28■■□□□ 1.32
LRRC28-210ENST00000558879 ZBTB7AO95365 584 aa23.28■■□□□ 1.32
LRRC28-210ENST00000558879 SPG7Q9UQ90 795 aa23.28■■□□□ 1.32
LRRC28-210ENST00000558879 SGIP1Q9BQI5 828 aa23.27■■□□□ 1.32
LRRC28-210ENST00000558879 PALLDQ8WX93 1383 aa23.27■■□□□ 1.31
LRRC28-210ENST00000558879 COL5A3P25940 1745 aaPredicted RBP23.26■■□□□ 1.31
LRRC28-210ENST00000558879 MTFR1LQ9H019 292 aa23.26■■□□□ 1.31
LRRC28-210ENST00000558879 KDRP35968 1356 aa23.26■■□□□ 1.31
LRRC28-210ENST00000558879 NPC1L1Q9UHC9 1359 aa23.26■■□□□ 1.31
LRRC28-210ENST00000558879 KCNQ4P56696 695 aa23.25■■□□□ 1.31
LRRC28-210ENST00000558879 PPP1R1BQ9UD71 204 aaPredicted RBP23.25■■□□□ 1.31
LRRC28-210ENST00000558879 PNPLA7Q6ZV29 1317 aa23.25■■□□□ 1.31
LRRC28-210ENST00000558879 PHKG2P15735 406 aa23.24■■□□□ 1.31
LRRC28-210ENST00000558879 CCNL1Q9UK58 526 aaPredicted RBP23.24■■□□□ 1.31
LRRC28-210ENST00000558879 CICQ96RK0 1608 aaPredicted RBP23.23■■□□□ 1.31
LRRC28-210ENST00000558879 IFNL2Q8IZJ0 200 aa23.22■■□□□ 1.31
LRRC28-210ENST00000558879 ADAMTS7Q9UKP4 1686 aa23.22■■□□□ 1.31
LRRC28-210ENST00000558879 MPRIPQ6WCQ1 1025 aa23.21■■□□□ 1.31
LRRC28-210ENST00000558879 ATF5Q9Y2D1 282 aaPredicted RBP23.21■■□□□ 1.31
LRRC28-210ENST00000558879 KDM6AO15550 1401 aaPredicted RBP23.21■■□□□ 1.31
LRRC28-210ENST00000558879 COL3A1P02461 1466 aaPredicted RBP23.21■■□□□ 1.31
LRRC28-210ENST00000558879 IL13P35225 146 aa23.19■■□□□ 1.3
LRRC28-210ENST00000558879 SLC16A10Q8TF71 515 aa23.19■■□□□ 1.3
LRRC28-210ENST00000558879 PIGBQ92521 554 aa23.19■■□□□ 1.3
LRRC28-210ENST00000558879 AEBP1Q8IUX7 1158 aa23.18■■□□□ 1.3
LRRC28-210ENST00000558879 SMARCC1Q92922 1105 aaPredicted RBP23.18■■□□□ 1.3
LRRC28-210ENST00000558879 CHD4Q14839 1912 aa23.18■■□□□ 1.3
LRRC28-210ENST00000558879 MAP3K5Q99683 1374 aa23.17■■□□□ 1.3
LRRC28-210ENST00000558879 TFCP2L1Q9NZI6 479 aa23.16■■□□□ 1.3
LRRC28-210ENST00000558879 TJP1Q07157 1748 aa23.16■■□□□ 1.3
LRRC28-210ENST00000558879 TMOD3Q9NYL9 352 aa23.15■■□□□ 1.3
LRRC28-210ENST00000558879 MTHFSP49914 203 aa23.14■■□□□ 1.29
LRRC28-210ENST00000558879 PLEKHO1Q53GL0 409 aaPredicted RBP23.14■■□□□ 1.29
LRRC28-210ENST00000558879 MYH14Q7Z406 1995 aaKnown RBP23.14■■□□□ 1.29
LRRC28-210ENST00000558879 C4AP0C0L4 1744 aa23.13■■□□□ 1.29
LRRC28-210ENST00000558879 MRC1P22897 1456 aa23.13■■□□□ 1.29
LRRC28-210ENST00000558879 AMOTQ4VCS5 1084 aa23.13■■□□□ 1.29
LRRC28-210ENST00000558879 CC2D1BQ5T0F9 858 aaKnown RBP23.13■■□□□ 1.29
LRRC28-210ENST00000558879 SULT6B1Q6IMI4 303 aa23.13■■□□□ 1.29
LRRC28-210ENST00000558879 HMGB2P26583 209 aaKnown RBP23.12■■□□□ 1.29
LRRC28-210ENST00000558879 FHDC1Q9C0D6 1143 aaPredicted RBP23.12■■□□□ 1.29
LRRC28-210ENST00000558879 SIPA1L3O60292 1781 aaPredicted RBP23.12■■□□□ 1.29
LRRC28-210ENST00000558879 HSP90AB1P08238 724 aaKnown RBP23.11■■□□□ 1.29
LRRC28-210ENST00000558879 ZNF530Q6P9A1 599 aaPredicted RBP23.11■■□□□ 1.29
LRRC28-210ENST00000558879 DCAF5Q96JK2 942 aa23.11■■□□□ 1.29
LRRC28-210ENST00000558879 UBR2Q8IWV8 1755 aa23.11■■□□□ 1.29
LRRC28-210ENST00000558879 LOC102724428A0A0B4J2F2 783 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms