RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	VPS9D1	Q9Y2B5	631 aa		10.2	□□□□□ -0.78
MARK3-215	ENST00000558787	ATRN	O75882	1429 aa		10.19	□□□□□ -0.78
MARK3-215	ENST00000558787	PRR36	Q9H6K5	1346 aa		10.19	□□□□□ -0.78
MARK3-215	ENST00000558787	HAP1	P54257	671 aa	Predicted RBP	10.18	□□□□□ -0.78
MARK3-215	ENST00000558787	DLC1	Q96QB1	1528 aa		10.17	□□□□□ -0.78
MARK3-215	ENST00000558787	WASL	O00401	505 aa	Predicted RBP	10.17	□□□□□ -0.78
MARK3-215	ENST00000558787	CAMK2B	Q13554	666 aa		10.17	□□□□□ -0.78
MARK3-215	ENST00000558787	KCTD12	Q96CX2	325 aa	Known RBP	10.17	□□□□□ -0.78
MARK3-215	ENST00000558787	GJD4	Q96KN9	370 aa	Predicted RBP	10.17	□□□□□ -0.78
MARK3-215	ENST00000558787	ADAM33	Q9BZ11	813 aa		10.17	□□□□□ -0.78
MARK3-215	ENST00000558787	KIF1A	Q12756	1690 aa		10.17	□□□□□ -0.78
MARK3-215	ENST00000558787	USP32	Q8NFA0	1604 aa		10.17	□□□□□ -0.78
MARK3-215	ENST00000558787	TNS3	Q68CZ2	1445 aa		10.16	□□□□□ -0.78
MARK3-215	ENST00000558787	NBPF1	Q3BBV0	1214 aa		10.16	□□□□□ -0.78
MARK3-215	ENST00000558787	UNC5CL	Q8IV45	518 aa		10.16	□□□□□ -0.78
MARK3-215	ENST00000558787	SBNO1	A3KN83	1393 aa		10.15	□□□□□ -0.78
MARK3-215	ENST00000558787	FAM83G	A6ND36	823 aa		10.15	□□□□□ -0.78
MARK3-215	ENST00000558787	NGDN	Q8NEJ9	315 aa	Known RBP	10.15	□□□□□ -0.78
MARK3-215	ENST00000558787	ANKAR	Q7Z5J8	1434 aa		10.15	□□□□□ -0.79
MARK3-215	ENST00000558787	SLIT2	O94813	1529 aa		10.14	□□□□□ -0.79
MARK3-215	ENST00000558787	MARF1	Q9Y4F3	1742 aa	Known RBP	10.14	□□□□□ -0.79
MARK3-215	ENST00000558787	FBXW7	Q969H0	707 aa		10.14	□□□□□ -0.79
MARK3-215	ENST00000558787	NUDT16	Q96DE0	195 aa	Known RBP	10.14	□□□□□ -0.79
MARK3-215	ENST00000558787	ZBED2	Q9BTP6	218 aa		10.14	□□□□□ -0.79
MARK3-215	ENST00000558787	CDK19	Q9BWU1	502 aa		10.14	□□□□□ -0.79
MARK3-215	ENST00000558787	CCDC9	Q9Y3X0	531 aa	Known RBP	10.14	□□□□□ -0.79
MARK3-215	ENST00000558787	PCDHGA10	Q9Y5H3	936 aa		10.14	□□□□□ -0.79
MARK3-215	ENST00000558787	ATAD2	Q6PL18	1390 aa		10.14	□□□□□ -0.79
MARK3-215	ENST00000558787	RALGAPB	Q86X10	1494 aa		10.13	□□□□□ -0.79
MARK3-215	ENST00000558787	PHF14	O94880	888 aa		10.13	□□□□□ -0.79
MARK3-215	ENST00000558787	TYW1B	Q6NUM6	668 aa		10.13	□□□□□ -0.79
MARK3-215	ENST00000558787	ADGRB2	O60241	1585 aa		10.13	□□□□□ -0.79
MARK3-215	ENST00000558787	ARHGEF10	O15013	1369 aa		10.13	□□□□□ -0.79
MARK3-215	ENST00000558787	GPRASP1	Q5JY77	1395 aa		10.13	□□□□□ -0.79
MARK3-215	ENST00000558787	GOLGA8CP	A6NN73	597 aa		10.12	□□□□□ -0.79
MARK3-215	ENST00000558787	DPYSL4	O14531	572 aa		10.12	□□□□□ -0.79
MARK3-215	ENST00000558787	NUTM2G	Q5VZR2	741 aa		10.12	□□□□□ -0.79
MARK3-215	ENST00000558787	SEPT12	Q8IYM1	358 aa		10.12	□□□□□ -0.79
MARK3-215	ENST00000558787	CFAP44	Q96MT7	982 aa		10.12	□□□□□ -0.79
MARK3-215	ENST00000558787	SIN3A	Q96ST3	1273 aa		10.12	□□□□□ -0.79
MARK3-215	ENST00000558787	GLI3	P10071	1580 aa		10.12	□□□□□ -0.79
MARK3-215	ENST00000558787	TULP4	Q9NRJ4	1543 aa		10.12	□□□□□ -0.79
MARK3-215	ENST00000558787	VPS72	Q15906	364 aa		10.11	□□□□□ -0.79
MARK3-215	ENST00000558787	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.11	□□□□□ -0.79
MARK3-215	ENST00000558787	BTG4	Q9NY30	223 aa		10.11	□□□□□ -0.79
MARK3-215	ENST00000558787	PLA2G2E	Q9NZK7	142 aa		10.11	□□□□□ -0.79
MARK3-215	ENST00000558787	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.1	□□□□□ -0.79
MARK3-215	ENST00000558787	EP400	Q96L91	3159 aa		10.1	□□□□□ -0.79
MARK3-215	ENST00000558787	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.1	□□□□□ -0.79
MARK3-215	ENST00000558787	NEUROD1	Q13562	356 aa		10.1	□□□□□ -0.79
MARK3-215	ENST00000558787	MRPL50	Q8N5N7	158 aa	Known RBP	10.1	□□□□□ -0.79
MARK3-215	ENST00000558787	L3MBTL2	Q969R5	705 aa		10.1	□□□□□ -0.79
MARK3-215	ENST00000558787	EPAS1	Q99814	870 aa		10.1	□□□□□ -0.79
MARK3-215	ENST00000558787	EIF3A	Q14152	1382 aa	Known RBP	10.1	□□□□□ -0.79
MARK3-215	ENST00000558787	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.1	□□□□□ -0.79
MARK3-215	ENST00000558787	PPP1R3G	B7ZBB8	358 aa		10.09	□□□□□ -0.79
MARK3-215	ENST00000558787	NBPF8	Q3BBV2	869 aa		10.09	□□□□□ -0.79
MARK3-215	ENST00000558787	NBPF3	Q9H094	633 aa		10.09	□□□□□ -0.79
MARK3-215	ENST00000558787	ABCA3	Q99758	1704 aa		10.09	□□□□□ -0.79
MARK3-215	ENST00000558787	ATP7B	P35670	1465 aa		10.09	□□□□□ -0.79
MARK3-215	ENST00000558787	ACE	P12821	1306 aa		10.08	□□□□□ -0.8
MARK3-215	ENST00000558787	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.08	□□□□□ -0.8
MARK3-215	ENST00000558787		A0A0G2JS52	829 aa		10.08	□□□□□ -0.8
MARK3-215	ENST00000558787	ZC3H6	P61129	1189 aa	Known RBP	10.08	□□□□□ -0.8
MARK3-215	ENST00000558787	MYT1	Q01538	1121 aa		10.08	□□□□□ -0.8
MARK3-215	ENST00000558787	CHRNA2	Q15822	529 aa		10.08	□□□□□ -0.8
MARK3-215	ENST00000558787	FAM98C	Q17RN3	349 aa	Known RBP	10.08	□□□□□ -0.8
MARK3-215	ENST00000558787	DEFB132	Q7Z7B7	95 aa		10.08	□□□□□ -0.8
MARK3-215	ENST00000558787	PLCH1	Q4KWH8	1693 aa		10.08	□□□□□ -0.8
MARK3-215	ENST00000558787	ALS2	Q96Q42	1657 aa		10.08	□□□□□ -0.8
MARK3-215	ENST00000558787	ONECUT3	O60422	494 aa	Predicted RBP	10.07	□□□□□ -0.8
MARK3-215	ENST00000558787	PTPN5	P54829	565 aa		10.07	□□□□□ -0.8
MARK3-215	ENST00000558787	SRPK2	P78362	688 aa	Known RBP	10.07	□□□□□ -0.8
MARK3-215	ENST00000558787	FAM182B	Q5T319	152 aa		10.07	□□□□□ -0.8
MARK3-215	ENST00000558787	PRDM11	Q9NQV5	511 aa		10.07	□□□□□ -0.8
MARK3-215	ENST00000558787	WDR70	Q9NW82	654 aa		10.07	□□□□□ -0.8
MARK3-215	ENST00000558787	SRCAP	Q6ZRS2	3230 aa		10.07	□□□□□ -0.8
MARK3-215	ENST00000558787	BRWD3	Q6RI45	1802 aa		10.06	□□□□□ -0.8
MARK3-215	ENST00000558787	PLEKHG3	A1L390	1219 aa		10.06	□□□□□ -0.8
MARK3-215	ENST00000558787	KRT27	Q7Z3Y8	459 aa		10.06	□□□□□ -0.8
MARK3-215	ENST00000558787	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.06	□□□□□ -0.8
MARK3-215	ENST00000558787	KIAA0232	Q92628	1395 aa		10.05	□□□□□ -0.8
MARK3-215	ENST00000558787	CCDC125	Q86Z20	511 aa		10.05	□□□□□ -0.8
MARK3-215	ENST00000558787	WNT2B	Q93097	391 aa		10.05	□□□□□ -0.8
MARK3-215	ENST00000558787	STRN4	Q9NRL3	753 aa		10.05	□□□□□ -0.8
MARK3-215	ENST00000558787	SPATA31A5	Q5VU36	1347 aa		10.05	□□□□□ -0.8
MARK3-215	ENST00000558787	SPATA31A7	Q8IWB4	1347 aa		10.05	□□□□□ -0.8
MARK3-215	ENST00000558787	NWD2	Q9ULI1	1742 aa		10.04	□□□□□ -0.8
MARK3-215	ENST00000558787	POLR3A	O14802	1390 aa	Predicted RBP	10.04	□□□□□ -0.8
MARK3-215	ENST00000558787	COL9A1	P20849	921 aa		10.04	□□□□□ -0.8
MARK3-215	ENST00000558787	E2F4	Q16254	413 aa		10.04	□□□□□ -0.8
MARK3-215	ENST00000558787	C6orf132	Q5T0Z8	1188 aa		10.04	□□□□□ -0.8
MARK3-215	ENST00000558787	ABTB2	Q8N961	1025 aa		10.04	□□□□□ -0.8
MARK3-215	ENST00000558787	RABGEF1	Q9UJ41	708 aa		10.04	□□□□□ -0.8
MARK3-215	ENST00000558787	KIAA1210	Q9ULL0	1709 aa		10.04	□□□□□ -0.8
MARK3-215	ENST00000558787	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.03	□□□□□ -0.8
MARK3-215	ENST00000558787	BLM	P54132	1417 aa	Predicted RBP	10.03	□□□□□ -0.8
MARK3-215	ENST00000558787	PPIP5K1	Q6PFW1	1433 aa		10.03	□□□□□ -0.8
MARK3-215	ENST00000558787	NRAP	Q86VF7	1730 aa		10.03	□□□□□ -0.8
MARK3-215	ENST00000558787	DDX12P	Q92771	950 aa		10.03	□□□□□ -0.8

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