RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 MRPL50Q8N5N7 158 aaKnown RBP8.33□□□□□ -1.08
LRRC28-208ENST00000558771 CDCA7LQ96GN5 454 aa8.33□□□□□ -1.08
LRRC28-208ENST00000558771 PXDNQ92626 1479 aa8.32□□□□□ -1.08
LRRC28-208ENST00000558771 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.32□□□□□ -1.08
LRRC28-208ENST00000558771 GLI3P10071 1580 aa8.32□□□□□ -1.08
LRRC28-208ENST00000558771 XPCQ01831 940 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-208ENST00000558771 ESCO1Q5FWF5 840 aa8.32□□□□□ -1.08
LRRC28-208ENST00000558771 NBPF3Q9H094 633 aa8.32□□□□□ -1.08
LRRC28-208ENST00000558771 TSKSQ9UJT2 592 aa8.32□□□□□ -1.08
LRRC28-208ENST00000558771 RALGAPBQ86X10 1494 aa8.32□□□□□ -1.08
LRRC28-208ENST00000558771 KIF1BO60333 1816 aa8.31□□□□□ -1.08
LRRC28-208ENST00000558771 BRWD3Q6RI45 1802 aa8.31□□□□□ -1.08
LRRC28-208ENST00000558771 HFM1A2PYH4 1435 aa8.31□□□□□ -1.08
LRRC28-208ENST00000558771 PRAG1Q86YV5 1406 aa8.31□□□□□ -1.08
LRRC28-208ENST00000558771 NUTM2FA1L443 756 aa8.31□□□□□ -1.08
LRRC28-208ENST00000558771 FOXO3O43524 673 aa8.31□□□□□ -1.08
LRRC28-208ENST00000558771 ITGAEP38570 1179 aa8.31□□□□□ -1.08
LRRC28-208ENST00000558771 PACS2Q86VP3 889 aa8.31□□□□□ -1.08
LRRC28-208ENST00000558771 UNC5CLQ8IV45 518 aa8.31□□□□□ -1.08
LRRC28-208ENST00000558771 LRP5O75197 1615 aa8.31□□□□□ -1.08
LRRC28-208ENST00000558771 SLIT2O94813 1529 aa8.3□□□□□ -1.08
LRRC28-208ENST00000558771 GOLGA8CPA6NN73 597 aa8.3□□□□□ -1.08
LRRC28-208ENST00000558771 RBM26Q5T8P6 1007 aaKnown RBP8.3□□□□□ -1.08
LRRC28-208ENST00000558771 FAM198AQ9UFP1 575 aa8.3□□□□□ -1.08
LRRC28-208ENST00000558771 CDC42BPGQ6DT37 1551 aa8.3□□□□□ -1.08
LRRC28-208ENST00000558771 SF3B2Q13435 895 aaKnown RBP8.29□□□□□ -1.08
LRRC28-208ENST00000558771 KCTD12Q96CX2 325 aaKnown RBP8.29□□□□□ -1.08
LRRC28-208ENST00000558771 LRPPRCP42704 1394 aaKnown RBP8.28□□□□□ -1.08
LRRC28-208ENST00000558771 PTGDRQ13258 359 aa8.28□□□□□ -1.08
LRRC28-208ENST00000558771 LAPTM4BQ86VI4 370 aa8.28□□□□□ -1.08
LRRC28-208ENST00000558771 SEPT12Q8IYM1 358 aa8.28□□□□□ -1.08
LRRC28-208ENST00000558771 RBM27Q9P2N5 1060 aaKnown RBP8.28□□□□□ -1.08
LRRC28-208ENST00000558771 NAIPQ13075 1403 aa8.28□□□□□ -1.08
LRRC28-208ENST00000558771 SPATA31A3Q5VYP0 1347 aa8.28□□□□□ -1.08
LRRC28-208ENST00000558771 TTC13Q8NBP0 860 aa8.27□□□□□ -1.09
LRRC28-208ENST00000558771 SEPT9Q9UHD8 586 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-208ENST00000558771 USP32Q8NFA0 1604 aa8.27□□□□□ -1.09
LRRC28-208ENST00000558771 RPGRIP1LQ68CZ1 1315 aa8.27□□□□□ -1.09
LRRC28-208ENST00000558771 PPLO60437 1756 aa8.26□□□□□ -1.09
LRRC28-208ENST00000558771 HRCP23327 699 aa8.26□□□□□ -1.09
LRRC28-208ENST00000558771 PADI6Q6TGC4 694 aa8.26□□□□□ -1.09
LRRC28-208ENST00000558771 KRT27Q7Z3Y8 459 aa8.26□□□□□ -1.09
LRRC28-208ENST00000558771 WAPLQ7Z5K2 1190 aa8.26□□□□□ -1.09
LRRC28-208ENST00000558771 WNT2BQ93097 391 aa8.26□□□□□ -1.09
LRRC28-208ENST00000558771 C3orf80F5H4A9 247 aa8.25□□□□□ -1.09
LRRC28-208ENST00000558771 SMAPO00193 183 aa8.25□□□□□ -1.09
LRRC28-208ENST00000558771 FCHSD2O94868 740 aa8.25□□□□□ -1.09
LRRC28-208ENST00000558771 VPS72Q15906 364 aa8.25□□□□□ -1.09
LRRC28-208ENST00000558771 TATDN2Q93075 761 aa8.25□□□□□ -1.09
LRRC28-208ENST00000558771 PNMA3Q9UL41 463 aa8.25□□□□□ -1.09
LRRC28-208ENST00000558771 KIF1AQ12756 1690 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 PLCH1Q4KWH8 1693 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 PLEKHH1Q9ULM0 1364 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 NWD2Q9ULI1 1742 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 CCDC144AA2RUR9 1427 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 TECPR2O15040 1411 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 BAG6P46379 1132 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 FAM98CQ17RN3 349 aaKnown RBP8.24□□□□□ -1.09
LRRC28-208ENST00000558771 KRT28Q7Z3Y7 464 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 CABLES1Q8TDN4 633 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 ZFRQ96KR1 1074 aaKnown RBP8.24□□□□□ -1.09
LRRC28-208ENST00000558771 STK26Q9P289 416 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 HCSTQ9UBK5 93 aa8.24□□□□□ -1.09
LRRC28-208ENST00000558771 CCDC9Q9Y3X0 531 aaKnown RBP8.24□□□□□ -1.09
LRRC28-208ENST00000558771 FMN2Q9NZ56 1722 aa8.23□□□□□ -1.09
LRRC28-208ENST00000558771 TNS3Q68CZ2 1445 aa8.23□□□□□ -1.09
LRRC28-208ENST00000558771 NBPF26B4DH59 902 aa8.23□□□□□ -1.09
LRRC28-208ENST00000558771 TULP1O00294 542 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-208ENST00000558771 NUDT18Q6ZVK8 323 aa8.23□□□□□ -1.09
LRRC28-208ENST00000558771 ADGRF5Q8IZF2 1346 aa8.23□□□□□ -1.09
LRRC28-208ENST00000558771 A0A0G2JS52 829 aa8.22□□□□□ -1.09
LRRC28-208ENST00000558771 PTPN5P54829 565 aa8.22□□□□□ -1.09
LRRC28-208ENST00000558771 MYT1Q01538 1121 aa8.22□□□□□ -1.09
LRRC28-208ENST00000558771 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
LRRC28-208ENST00000558771 ANKK1Q8NFD2 765 aa8.22□□□□□ -1.09
LRRC28-208ENST00000558771 KNDC1Q76NI1 1749 aa8.22□□□□□ -1.09
LRRC28-208ENST00000558771 ABCA3Q99758 1704 aa8.22□□□□□ -1.09
LRRC28-208ENST00000558771 RGPD8O14715 1765 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-208ENST00000558771 ABCC11Q96J66 1382 aa8.22□□□□□ -1.09
LRRC28-208ENST00000558771 RRBP1Q9P2E9 1410 aaKnown RBP8.21□□□□□ -1.09
LRRC28-208ENST00000558771 PSME1Q06323 249 aa8.21□□□□□ -1.1
LRRC28-208ENST00000558771 HIC1Q14526 733 aa8.21□□□□□ -1.1
LRRC28-208ENST00000558771 R3HDM1Q15032 1099 aaKnown RBP8.21□□□□□ -1.1
LRRC28-208ENST00000558771 TMEM132EQ6IEE7 984 aa8.21□□□□□ -1.1
LRRC28-208ENST00000558771 PPARGC1BQ86YN6 1023 aaKnown RBP8.21□□□□□ -1.1
LRRC28-208ENST00000558771 RGPD1P0DJD0 1748 aa8.2□□□□□ -1.1
LRRC28-208ENST00000558771 NRAPQ86VF7 1730 aa8.2□□□□□ -1.1
LRRC28-208ENST00000558771 FAM83GA6ND36 823 aa8.2□□□□□ -1.1
LRRC28-208ENST00000558771 FAM182BQ5T319 152 aa8.2□□□□□ -1.1
LRRC28-208ENST00000558771 LMOD2Q6P5Q4 547 aa8.2□□□□□ -1.1
LRRC28-208ENST00000558771 SBNO1A3KN83 1393 aa8.2□□□□□ -1.1
LRRC28-208ENST00000558771 IFT172Q9UG01 1749 aa8.2□□□□□ -1.1
LRRC28-208ENST00000558771 NRXN1Q9ULB1 1477 aa8.19□□□□□ -1.1
LRRC28-208ENST00000558771 SOWAHBA6NEL2 793 aa8.19□□□□□ -1.1
LRRC28-208ENST00000558771 GPR37O15354 613 aa8.19□□□□□ -1.1
LRRC28-208ENST00000558771 RGL3Q3MIN7 710 aa8.19□□□□□ -1.1
LRRC28-208ENST00000558771 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.19□□□□□ -1.1
LRRC28-208ENST00000558771 GPIHBP1Q8IV16 184 aa8.19□□□□□ -1.1
LRRC28-208ENST00000558771 EYA1Q99502 592 aa8.19□□□□□ -1.1
LRRC28-208ENST00000558771 ARHGEF10O15013 1369 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms