RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 IL13P35225 146 aa18.74■□□□□ 0.59
TSPAN3-205ENST00000558745 BAG6P46379 1132 aa18.74■□□□□ 0.59
TSPAN3-205ENST00000558745 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
TSPAN3-205ENST00000558745 AEBP1Q8IUX7 1158 aa18.74■□□□□ 0.59
TSPAN3-205ENST00000558745 CAMKK2Q96RR4 588 aa18.72■□□□□ 0.59
TSPAN3-205ENST00000558745 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
TSPAN3-205ENST00000558745 RGPD1P0DJD0 1748 aa18.71■□□□□ 0.59
TSPAN3-205ENST00000558745 KAT6BQ8WYB5 2073 aa18.71■□□□□ 0.59
TSPAN3-205ENST00000558745 PPP2R1AP30153 589 aa18.71■□□□□ 0.59
TSPAN3-205ENST00000558745 BCL11BQ9C0K0 894 aaPredicted RBP18.71■□□□□ 0.59
TSPAN3-205ENST00000558745 TNS1Q9HBL0 1735 aaKnown RBP18.71■□□□□ 0.59
TSPAN3-205ENST00000558745 SBF2Q86WG5 1849 aa18.7■□□□□ 0.58
TSPAN3-205ENST00000558745 NCAPD2Q15021 1401 aa18.7■□□□□ 0.58
TSPAN3-205ENST00000558745 CYP27B1O15528 508 aa18.7■□□□□ 0.58
TSPAN3-205ENST00000558745 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
TSPAN3-205ENST00000558745 YY1P25490 414 aa18.69■□□□□ 0.58
TSPAN3-205ENST00000558745 BCL9O00512 1426 aa18.68■□□□□ 0.58
TSPAN3-205ENST00000558745 PSDA5PKW4 1024 aaPredicted RBP18.68■□□□□ 0.58
TSPAN3-205ENST00000558745 DIAPH1O60610 1272 aaKnown RBP18.68■□□□□ 0.58
TSPAN3-205ENST00000558745 HMOX1P09601 288 aa18.68■□□□□ 0.58
TSPAN3-205ENST00000558745 PRIM1P49642 420 aaKnown RBP18.68■□□□□ 0.58
TSPAN3-205ENST00000558745 SHANK3Q9BYB0 1731 aa18.68■□□□□ 0.58
TSPAN3-205ENST00000558745 SYTL4Q96C24 671 aaPredicted RBP18.67■□□□□ 0.58
TSPAN3-205ENST00000558745 SPG7Q9UQ90 795 aa18.66■□□□□ 0.58
TSPAN3-205ENST00000558745 PROM2Q8N271 834 aa18.65■□□□□ 0.58
TSPAN3-205ENST00000558745 PCDH11XQ9BZA7 1347 aa18.65■□□□□ 0.58
TSPAN3-205ENST00000558745 PCDH11YQ9BZA8 1340 aa18.65■□□□□ 0.58
TSPAN3-205ENST00000558745 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
TSPAN3-205ENST00000558745 U2SURPO15042 1029 aaKnown RBP18.64■□□□□ 0.57
TSPAN3-205ENST00000558745 COL3A1P02461 1466 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-205ENST00000558745 PLSCR1O15162 318 aa18.63■□□□□ 0.57
TSPAN3-205ENST00000558745 PARD3Q8TEW0 1356 aa18.62■□□□□ 0.57
TSPAN3-205ENST00000558745 PHKG2P15735 406 aa18.62■□□□□ 0.57
TSPAN3-205ENST00000558745 PLEKHO1Q53GL0 409 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-205ENST00000558745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.62■□□□□ 0.57
TSPAN3-205ENST00000558745 IFNL2Q8IZJ0 200 aa18.61■□□□□ 0.57
TSPAN3-205ENST00000558745 MPRIPQ6WCQ1 1025 aa18.6■□□□□ 0.57
TSPAN3-205ENST00000558745 CFAP53Q96M91 514 aa18.6■□□□□ 0.57
TSPAN3-205ENST00000558745 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
TSPAN3-205ENST00000558745 NHSQ6T4R5 1651 aa18.6■□□□□ 0.57
TSPAN3-205ENST00000558745 KDRP35968 1356 aa18.6■□□□□ 0.57
TSPAN3-205ENST00000558745 NKX1-1Q15270 411 aaPredicted RBP18.59■□□□□ 0.57
TSPAN3-205ENST00000558745 TXNRD1Q16881 649 aa18.59■□□□□ 0.57
TSPAN3-205ENST00000558745 ZNF530Q6P9A1 599 aaPredicted RBP18.59■□□□□ 0.57
TSPAN3-205ENST00000558745 DOT1LQ8TEK3 1739 aa18.58■□□□□ 0.57
TSPAN3-205ENST00000558745 KCNQ4P56696 695 aa18.58■□□□□ 0.57
TSPAN3-205ENST00000558745 R3HDM1Q15032 1099 aaKnown RBP18.57■□□□□ 0.56
TSPAN3-205ENST00000558745 AMOTQ4VCS5 1084 aa18.57■□□□□ 0.56
TSPAN3-205ENST00000558745 BTAF1O14981 1849 aa18.57■□□□□ 0.56
TSPAN3-205ENST00000558745 RALBP1Q15311 655 aa18.56■□□□□ 0.56
TSPAN3-205ENST00000558745 PIGBQ92521 554 aa18.56■□□□□ 0.56
TSPAN3-205ENST00000558745 U2AF1L5P0DN76 240 aaPredicted RBP18.55■□□□□ 0.56
TSPAN3-205ENST00000558745 U2AF1Q01081 240 aaKnown RBP eCLIP18.55■□□□□ 0.56
TSPAN3-205ENST00000558745 MTHFSDQ2M296 383 aaKnown RBP18.55■□□□□ 0.56
TSPAN3-205ENST00000558745 PHACTR3Q96KR7 559 aa18.54■□□□□ 0.56
TSPAN3-205ENST00000558745 ANO8Q9HCE9 1232 aaPredicted RBP18.54■□□□□ 0.56
TSPAN3-205ENST00000558745 LRRC4BQ9NT99 713 aa18.54■□□□□ 0.56
TSPAN3-205ENST00000558745 NUDCQ9Y266 331 aa18.54■□□□□ 0.56
TSPAN3-205ENST00000558745 TOGARAM1Q9Y4F4 1720 aa18.53■□□□□ 0.56
TSPAN3-205ENST00000558745 DCAF8L1A6NGE4 600 aa18.53■□□□□ 0.56
TSPAN3-205ENST00000558745 RREB1Q92766 1687 aa18.53■□□□□ 0.56
TSPAN3-205ENST00000558745 PRKAR2BP31323 418 aa18.52■□□□□ 0.56
TSPAN3-205ENST00000558745 C1orf141Q5JVX7 400 aa18.52■□□□□ 0.56
TSPAN3-205ENST00000558745 NBPF14Q5TI25 921 aa18.52■□□□□ 0.56
TSPAN3-205ENST00000558745 LGR6Q9HBX8 967 aa18.52■□□□□ 0.56
TSPAN3-205ENST00000558745 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.56
TSPAN3-205ENST00000558745 IFFO2Q5TF58 517 aa18.51■□□□□ 0.55
TSPAN3-205ENST00000558745 RSPH6AQ9H0K4 717 aa18.51■□□□□ 0.55
TSPAN3-205ENST00000558745 PRKRIP1Q9H875 184 aaPredicted RBP18.51■□□□□ 0.55
TSPAN3-205ENST00000558745 DCAF5Q96JK2 942 aa18.5■□□□□ 0.55
TSPAN3-205ENST00000558745 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
TSPAN3-205ENST00000558745 ASAP1Q9ULH1 1129 aa18.5■□□□□ 0.55
TSPAN3-205ENST00000558745 KDM6AO15550 1401 aaPredicted RBP18.5■□□□□ 0.55
TSPAN3-205ENST00000558745 ITGB4P16144 1822 aa18.5■□□□□ 0.55
TSPAN3-205ENST00000558745 AKAP4Q5JQC9 854 aa18.49■□□□□ 0.55
TSPAN3-205ENST00000558745 MYBBP1AQ9BQG0 1328 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-205ENST00000558745 HSP90AB1P08238 724 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-205ENST00000558745 PDGFDQ9GZP0 370 aaPredicted RBP18.49■□□□□ 0.55
TSPAN3-205ENST00000558745 PLEKHG2Q9H7P9 1386 aa18.48■□□□□ 0.55
TSPAN3-205ENST00000558745 ERVV-2B6SEH9 535 aa18.48■□□□□ 0.55
TSPAN3-205ENST00000558745 CABP4P57796 275 aa18.48■□□□□ 0.55
TSPAN3-205ENST00000558745 NFATC2IPQ8NCF5 419 aa18.48■□□□□ 0.55
TSPAN3-205ENST00000558745 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
TSPAN3-205ENST00000558745 CCNL1Q9UK58 526 aaPredicted RBP18.48■□□□□ 0.55
TSPAN3-205ENST00000558745 RGPD3A6NKT7 1758 aaPredicted RBP18.47■□□□□ 0.55
TSPAN3-205ENST00000558745 RGPD4Q7Z3J3 1758 aa18.47■□□□□ 0.55
TSPAN3-205ENST00000558745 RNMTO43148 476 aaKnown RBP18.47■□□□□ 0.55
TSPAN3-205ENST00000558745 FCHSD2O94868 740 aa18.47■□□□□ 0.55
TSPAN3-205ENST00000558745 ZNF827Q17R98 1081 aa18.47■□□□□ 0.55
TSPAN3-205ENST00000558745 PALLDQ8WX93 1383 aa18.46■□□□□ 0.55
TSPAN3-205ENST00000558745 SLC15A2Q16348 729 aa18.46■□□□□ 0.55
TSPAN3-205ENST00000558745 STK32BQ9NY57 414 aa18.46■□□□□ 0.55
TSPAN3-205ENST00000558745 SLC27A3Q5K4L6 730 aa18.45■□□□□ 0.54
TSPAN3-205ENST00000558745 IL17REQ8NFR9 667 aa18.44■□□□□ 0.54
TSPAN3-205ENST00000558745 SMARCC1Q92922 1105 aaPredicted RBP18.44■□□□□ 0.54
TSPAN3-205ENST00000558745 CCDC184Q52MB2 194 aa18.43■□□□□ 0.54
TSPAN3-205ENST00000558745 GAS2L2Q8NHY3 880 aa18.43■□□□□ 0.54
TSPAN3-205ENST00000558745 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
TSPAN3-205ENST00000558745 LY75O60449 1722 aa18.42■□□□□ 0.54
TSPAN3-205ENST00000558745 GNAT3A8MTJ3 354 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms