RNA–Protein interactions for RNA: ENST00000558726.5

TMC3-202, Transcript of transmembrane channel like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMC3, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-202ENST00000558726 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
TMC3-202ENST00000558726 EMILIN1Q9Y6C2 1016 aa12.96□□□□□ -0.33
TMC3-202ENST00000558726 TRIM29Q14134 588 aa12.96□□□□□ -0.33
TMC3-202ENST00000558726 TEX35Q5T0J7 233 aa12.96□□□□□ -0.33
TMC3-202ENST00000558726 HOMER1Q86YM7 354 aa12.96□□□□□ -0.33
TMC3-202ENST00000558726 TNMDQ9H2S6 317 aa12.96□□□□□ -0.33
TMC3-202ENST00000558726 PDRG1Q9NUG6 133 aa12.96□□□□□ -0.33
TMC3-202ENST00000558726 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.34
TMC3-202ENST00000558726 ZNF396Q96N95 335 aaPredicted RBP12.96□□□□□ -0.34
TMC3-202ENST00000558726 SH2B1Q9NRF2 756 aaPredicted RBP12.96□□□□□ -0.34
TMC3-202ENST00000558726 SRGAP3O43295 1099 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
TMC3-202ENST00000558726 TPM1P09493 284 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 ZSCAN23Q3MJ62 389 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 TRDNQ13061 729 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 LRSAM1Q6UWE0 723 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 SYNE3Q6ZMZ3 975 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 SYNMO15061 1565 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 WASLO00401 505 aaPredicted RBP12.95□□□□□ -0.34
TMC3-202ENST00000558726 ANAPC15P60006 121 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 SDF4Q9BRK5 362 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 NUP62CLQ9H1M0 184 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 TNNT3P45378 269 aaPredicted RBP12.95□□□□□ -0.34
TMC3-202ENST00000558726 PSME1Q06323 249 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 BLOC1S2Q6QNY1 142 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 NME9Q86XW9 330 aa12.95□□□□□ -0.34
TMC3-202ENST00000558726 CCP110O43303 1012 aa12.94□□□□□ -0.34
TMC3-202ENST00000558726 KRT32Q14532 448 aa12.94□□□□□ -0.34
TMC3-202ENST00000558726 DENND4BO75064 1496 aaPredicted RBP12.94□□□□□ -0.34
TMC3-202ENST00000558726 TTC21BQ7Z4L5 1316 aa12.94□□□□□ -0.34
TMC3-202ENST00000558726 MAGI2Q86UL8 1455 aa12.94□□□□□ -0.34
TMC3-202ENST00000558726 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
TMC3-202ENST00000558726 DCTPP1Q9H773 170 aa12.94□□□□□ -0.34
TMC3-202ENST00000558726 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
TMC3-202ENST00000558726 KDM5AP29375 1690 aaKnown RBP12.94□□□□□ -0.34
TMC3-202ENST00000558726 MCM10Q7L590 875 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 PRDM15P57071 1507 aaPredicted RBP12.93□□□□□ -0.34
TMC3-202ENST00000558726 GNAT3A8MTJ3 354 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 JAKMIP1Q96N16 626 aaKnown RBP12.93□□□□□ -0.34
TMC3-202ENST00000558726 ZNF518AQ6AHZ1 1483 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 VAMP4O75379 141 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 SDSP20132 328 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 MAP3K11Q16584 847 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 UPF3BQ9BZI7 483 aaKnown RBP12.93□□□□□ -0.34
TMC3-202ENST00000558726 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 DYNC1I1O14576 645 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 CFAP45Q9UL16 551 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
TMC3-202ENST00000558726 PTPRTO14522 1441 aa12.92□□□□□ -0.34
TMC3-202ENST00000558726 WAPLQ7Z5K2 1190 aa12.92□□□□□ -0.34
TMC3-202ENST00000558726 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
TMC3-202ENST00000558726 ABTB2Q8N961 1025 aa12.92□□□□□ -0.34
TMC3-202ENST00000558726 SPC24Q8NBT2 197 aa12.92□□□□□ -0.34
TMC3-202ENST00000558726 CCDC112Q8NEF3 446 aa12.92□□□□□ -0.34
TMC3-202ENST00000558726 MNS1Q8NEH6 495 aa12.92□□□□□ -0.34
TMC3-202ENST00000558726 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
TMC3-202ENST00000558726 XPCQ01831 940 aaPredicted RBP12.92□□□□□ -0.34
TMC3-202ENST00000558726 CWC27Q6UX04 472 aaKnown RBP12.92□□□□□ -0.34
TMC3-202ENST00000558726 RALYLQ86SE5 291 aaKnown RBP12.92□□□□□ -0.34
TMC3-202ENST00000558726 PDCL2Q8N4E4 241 aa12.92□□□□□ -0.34
TMC3-202ENST00000558726 RAPGEF4Q8WZA2 1011 aa12.92□□□□□ -0.34
TMC3-202ENST00000558726 SPATA32Q96LK8 384 aa12.92□□□□□ -0.34
TMC3-202ENST00000558726 SCAND2PQ9GZW5 306 aaPredicted RBP12.92□□□□□ -0.34
TMC3-202ENST00000558726 BCORL1Q5H9F3 1711 aa12.91□□□□□ -0.34
TMC3-202ENST00000558726 AKAP17AQ02040 695 aaKnown RBP12.91□□□□□ -0.34
TMC3-202ENST00000558726 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
TMC3-202ENST00000558726 CASTP20810 708 aaKnown RBP12.9□□□□□ -0.34
TMC3-202ENST00000558726 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
TMC3-202ENST00000558726 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
TMC3-202ENST00000558726 PRIMPOLQ96LW4 560 aa12.9□□□□□ -0.34
TMC3-202ENST00000558726 TOMM22Q9NS69 142 aa12.9□□□□□ -0.34
TMC3-202ENST00000558726 WDR7Q9Y4E6 1490 aa12.9□□□□□ -0.34
TMC3-202ENST00000558726 ABCA8O94911 1581 aa12.9□□□□□ -0.34
TMC3-202ENST00000558726 CCDC66A2RUB6 948 aa12.9□□□□□ -0.34
TMC3-202ENST00000558726 TSR1Q2NL82 804 aaKnown RBP12.9□□□□□ -0.34
TMC3-202ENST00000558726 AIMP1Q12904 312 aaKnown RBP12.9□□□□□ -0.34
TMC3-202ENST00000558726 ZKSCAN5Q9Y2L8 839 aa12.9□□□□□ -0.34
TMC3-202ENST00000558726 RRAGDQ9NQL2 400 aaPredicted RBP12.89□□□□□ -0.35
TMC3-202ENST00000558726 A0A1W2PP64 1363 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 UBE2HP62256 183 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 FLIIQ13045 1269 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
TMC3-202ENST00000558726 OLFM4Q6UX06 510 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 OFD1O75665 1012 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 PDE1AP54750 535 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 SAFBQ15424 915 aaKnown RBP eCLIP12.89□□□□□ -0.35
TMC3-202ENST00000558726 AACSQ86V21 672 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 ANKRD20A12PQ8NF67 263 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
TMC3-202ENST00000558726 PLEKHM2Q8IWE5 1019 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
TMC3-202ENST00000558726 NEUROD6Q96NK8 337 aa12.88□□□□□ -0.35
TMC3-202ENST00000558726 INTS4Q96HW7 963 aaKnown RBP12.88□□□□□ -0.35
TMC3-202ENST00000558726 PLXNC1O60486 1568 aa12.88□□□□□ -0.35
TMC3-202ENST00000558726 KIF2AO00139 706 aaPredicted RBP12.88□□□□□ -0.35
TMC3-202ENST00000558726 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
TMC3-202ENST00000558726 F6X3S4 739 aa12.87□□□□□ -0.35
TMC3-202ENST00000558726 STX6O43752 255 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms