RNA–Protein interactions for RNA: ENST00000558442.1

TRIP4-204, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-204ENST00000558442 KLHL34Q8N239 644 aa26.35■■□□□ 1.81
TRIP4-204ENST00000558442 ZCRB1Q8TBF4 217 aaKnown RBP26.35■■□□□ 1.81
TRIP4-204ENST00000558442 COG3Q96JB2 828 aa26.35■■□□□ 1.81
TRIP4-204ENST00000558442 TESK2Q96S53 571 aa26.35■■□□□ 1.81
TRIP4-204ENST00000558442 TUBGCP6Q96RT7 1819 aa26.34■■□□□ 1.81
TRIP4-204ENST00000558442 AMPHP49418 695 aa26.33■■□□□ 1.81
TRIP4-204ENST00000558442 LY75O60449 1722 aa26.32■■□□□ 1.8
TRIP4-204ENST00000558442 DOT1LQ8TEK3 1739 aa26.32■■□□□ 1.8
TRIP4-204ENST00000558442 NLGN2Q8NFZ4 835 aa26.32■■□□□ 1.8
TRIP4-204ENST00000558442 RGPD2P0DJD1 1756 aa26.32■■□□□ 1.8
TRIP4-204ENST00000558442 SHANK3Q9BYB0 1731 aa26.31■■□□□ 1.8
TRIP4-204ENST00000558442 MEGF6O75095 1541 aa26.31■■□□□ 1.8
TRIP4-204ENST00000558442 SENP3-EIF4A1A0A087X0R7 540 aa26.31■■□□□ 1.8
TRIP4-204ENST00000558442 GOLGB1Q14789 3259 aaKnown RBP26.3■■□□□ 1.8
TRIP4-204ENST00000558442 ST20-MTHFSA0A0A6YYL1 179 aa26.3■■□□□ 1.8
TRIP4-204ENST00000558442 PELP1Q8IZL8 1130 aaKnown RBP26.29■■□□□ 1.8
TRIP4-204ENST00000558442 CCNL1Q9UK58 526 aaPredicted RBP26.29■■□□□ 1.8
TRIP4-204ENST00000558442 NBPF6Q5VWK0 638 aa26.28■■□□□ 1.8
TRIP4-204ENST00000558442 NBPF4Q96M43 638 aa26.28■■□□□ 1.8
TRIP4-204ENST00000558442 TONSLQ96HA7 1378 aa26.28■■□□□ 1.8
TRIP4-204ENST00000558442 COL23A1Q86Y22 540 aaPredicted RBP26.27■■□□□ 1.8
TRIP4-204ENST00000558442 RRS1Q15050 365 aaKnown RBP26.25■■□□□ 1.79
TRIP4-204ENST00000558442 USHBP1Q8N6Y0 703 aa26.24■■□□□ 1.79
TRIP4-204ENST00000558442 USP47Q96K76 1375 aa26.23■■□□□ 1.79
TRIP4-204ENST00000558442 FYB1O15117 783 aa26.23■■□□□ 1.79
TRIP4-204ENST00000558442 YBX3P16989 372 aaKnown RBP eCLIP26.23■■□□□ 1.79
TRIP4-204ENST00000558442 RTL1A6NKG5 1358 aa26.22■■□□□ 1.79
TRIP4-204ENST00000558442 MSH5O43196 834 aa26.22■■□□□ 1.79
TRIP4-204ENST00000558442 CGNL1Q0VF96 1302 aa26.21■■□□□ 1.79
TRIP4-204ENST00000558442 GGNBP2Q9H3C7 697 aa26.21■■□□□ 1.79
TRIP4-204ENST00000558442 SLC24A1O60721 1099 aa26.2■■□□□ 1.78
TRIP4-204ENST00000558442 GIGYF1O75420 1035 aaPredicted RBP26.2■■□□□ 1.78
TRIP4-204ENST00000558442 RAPGEF4Q8WZA2 1011 aa26.19■■□□□ 1.78
TRIP4-204ENST00000558442 GRIN3BO60391 1043 aa26.18■■□□□ 1.78
TRIP4-204ENST00000558442 MSL1Q68DK7 614 aa26.18■■□□□ 1.78
TRIP4-204ENST00000558442 HSP90AB2PQ58FF8 381 aa26.17■■□□□ 1.78
TRIP4-204ENST00000558442 TATP17735 454 aaPredicted RBP26.16■■□□□ 1.78
TRIP4-204ENST00000558442 INSRP06213 1382 aa26.14■■□□□ 1.78
TRIP4-204ENST00000558442 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.77
TRIP4-204ENST00000558442 PCDH11XQ9BZA7 1347 aa26.13■■□□□ 1.77
TRIP4-204ENST00000558442 PCDH11YQ9BZA8 1340 aa26.13■■□□□ 1.77
TRIP4-204ENST00000558442 C5P01031 1676 aa26.12■■□□□ 1.77
TRIP4-204ENST00000558442 CYP27B1O15528 508 aa26.12■■□□□ 1.77
TRIP4-204ENST00000558442 MPRIPQ6WCQ1 1025 aa26.12■■□□□ 1.77
TRIP4-204ENST00000558442 PALLDQ8WX93 1383 aa26.11■■□□□ 1.77
TRIP4-204ENST00000558442 CD2APQ9Y5K6 639 aa26.11■■□□□ 1.77
TRIP4-204ENST00000558442 TMF1P82094 1093 aa26.1■■□□□ 1.77
TRIP4-204ENST00000558442 FLAD1Q8NFF5 587 aa26.1■■□□□ 1.77
TRIP4-204ENST00000558442 TAF1LQ8IZX4 1826 aa26.09■■□□□ 1.77
TRIP4-204ENST00000558442 FLT4P35916 1363 aa26.08■■□□□ 1.77
TRIP4-204ENST00000558442 AMIGO3Q86WK7 504 aa26.08■■□□□ 1.77
TRIP4-204ENST00000558442 KIF24Q5T7B8 1368 aa26.07■■□□□ 1.76
TRIP4-204ENST00000558442 HMGB2P26583 209 aaKnown RBP26.07■■□□□ 1.76
TRIP4-204ENST00000558442 SMIM5Q71RC9 77 aa26.05■■□□□ 1.76
TRIP4-204ENST00000558442 SMARCC1Q92922 1105 aaPredicted RBP26.05■■□□□ 1.76
TRIP4-204ENST00000558442 CARD14Q9BXL6 1004 aa26.05■■□□□ 1.76
TRIP4-204ENST00000558442 TOGARAM1Q9Y4F4 1720 aa26.05■■□□□ 1.76
TRIP4-204ENST00000558442 ATP10DQ9P241 1426 aa26.05■■□□□ 1.76
TRIP4-204ENST00000558442 PIGBQ92521 554 aa26.04■■□□□ 1.76
TRIP4-204ENST00000558442 ITGB4P16144 1822 aa26.04■■□□□ 1.76
TRIP4-204ENST00000558442 C4BP0C0L5 1744 aa26.03■■□□□ 1.76
TRIP4-204ENST00000558442 KIF20BQ96Q89 1820 aa26.03■■□□□ 1.76
TRIP4-204ENST00000558442 EMILIN1Q9Y6C2 1016 aa26.03■■□□□ 1.76
TRIP4-204ENST00000558442 CEP350Q5VT06 3117 aa26.03■■□□□ 1.76
TRIP4-204ENST00000558442 NKX1-1Q15270 411 aaPredicted RBP26.02■■□□□ 1.76
TRIP4-204ENST00000558442 AK7Q96M32 723 aa26.02■■□□□ 1.76
TRIP4-204ENST00000558442 PKD1L3Q7Z443 1732 aa26■■□□□ 1.75
TRIP4-204ENST00000558442 NCAPD2Q15021 1401 aa25.99■■□□□ 1.75
TRIP4-204ENST00000558442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.99■■□□□ 1.75
TRIP4-204ENST00000558442 PHF14O94880 888 aa25.99■■□□□ 1.75
TRIP4-204ENST00000558442 UBR3Q6ZT12 1888 aa25.98■■□□□ 1.75
TRIP4-204ENST00000558442 CDCA8Q53HL2 280 aa25.98■■□□□ 1.75
TRIP4-204ENST00000558442 ADCY9O60503 1353 aa25.97■■□□□ 1.75
TRIP4-204ENST00000558442 LINC00116Q8NCU8 138 aa25.97■■□□□ 1.75
TRIP4-204ENST00000558442 GPBP1L1Q9HC44 474 aaPredicted RBP25.97■■□□□ 1.75
TRIP4-204ENST00000558442 MAP2P11137 1827 aaKnown RBP25.97■■□□□ 1.75
TRIP4-204ENST00000558442 LOC102724428A0A0B4J2F2 783 aa25.96■■□□□ 1.75
TRIP4-204ENST00000558442 SIK1P57059 783 aa25.96■■□□□ 1.75
TRIP4-204ENST00000558442 SPG7Q9UQ90 795 aa25.96■■□□□ 1.75
TRIP4-204ENST00000558442 IGSF1Q8N6C5 1336 aa25.95■■□□□ 1.75
TRIP4-204ENST00000558442 PPM1GO15355 546 aaPredicted RBP25.95■■□□□ 1.74
TRIP4-204ENST00000558442 SSFA2P28290 1259 aa25.95■■□□□ 1.74
TRIP4-204ENST00000558442 WWC3Q9ULE0 1092 aa25.95■■□□□ 1.74
TRIP4-204ENST00000558442 NSD3Q9BZ95 1437 aa25.95■■□□□ 1.74
TRIP4-204ENST00000558442 EYA1Q99502 592 aa25.94■■□□□ 1.74
TRIP4-204ENST00000558442 WASHC2AQ641Q2 1341 aa25.93■■□□□ 1.74
TRIP4-204ENST00000558442 ITPK1Q13572 414 aa25.93■■□□□ 1.74
TRIP4-204ENST00000558442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.93■■□□□ 1.74
TRIP4-204ENST00000558442 ASAP1Q9ULH1 1129 aa25.93■■□□□ 1.74
TRIP4-204ENST00000558442 IFFO2Q5TF58 517 aa25.92■■□□□ 1.74
TRIP4-204ENST00000558442 ZNF526Q8TF50 670 aaPredicted RBP25.92■■□□□ 1.74
TRIP4-204ENST00000558442 TMOD3Q9NYL9 352 aa25.91■■□□□ 1.74
TRIP4-204ENST00000558442 ANKRD26Q9UPS8 1709 aa25.89■■□□□ 1.74
TRIP4-204ENST00000558442 PHKG2P15735 406 aa25.89■■□□□ 1.74
TRIP4-204ENST00000558442 GNPATO15228 680 aa25.88■■□□□ 1.73
TRIP4-204ENST00000558442 ATP6V1AP38606 617 aa25.88■■□□□ 1.73
TRIP4-204ENST00000558442 IFNL2Q8IZJ0 200 aa25.88■■□□□ 1.73
TRIP4-204ENST00000558442 ATG3Q9NT62 314 aa25.88■■□□□ 1.73
TRIP4-204ENST00000558442 POLKQ9UBT6 870 aa25.88■■□□□ 1.73
TRIP4-204ENST00000558442 HSPA6P17066 643 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms