RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 IPO4Q8TEX9 1081 aaKnown RBP13.58□□□□□ -0.24
PCAT29-201ENST00000558411 TMX3Q96JJ7 454 aa13.58□□□□□ -0.24
PCAT29-201ENST00000558411 KDM4AO75164 1064 aa13.57□□□□□ -0.24
PCAT29-201ENST00000558411 NAP1L2Q9ULW6 460 aaPredicted RBP13.57□□□□□ -0.24
PCAT29-201ENST00000558411 ADGRB1O14514 1584 aa13.57□□□□□ -0.24
PCAT29-201ENST00000558411 ERC2O15083 957 aa13.57□□□□□ -0.24
PCAT29-201ENST00000558411 PLCH2O75038 1416 aa13.57□□□□□ -0.24
PCAT29-201ENST00000558411 CHAMP1Q96JM3 812 aa13.57□□□□□ -0.24
PCAT29-201ENST00000558411 ZFYVE16Q7Z3T8 1539 aa13.56□□□□□ -0.24
PCAT29-201ENST00000558411 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
PCAT29-201ENST00000558411 SDSP20132 328 aa13.56□□□□□ -0.24
PCAT29-201ENST00000558411 ATAD2Q6PL18 1390 aa13.56□□□□□ -0.24
PCAT29-201ENST00000558411 VAMP4O75379 141 aa13.55□□□□□ -0.24
PCAT29-201ENST00000558411 C17orf53Q8N3J3 647 aaPredicted RBP13.55□□□□□ -0.24
PCAT29-201ENST00000558411 API5Q9BZZ5 524 aaKnown RBP13.55□□□□□ -0.24
PCAT29-201ENST00000558411 FANCAO15360 1455 aa13.55□□□□□ -0.24
PCAT29-201ENST00000558411 CCDC66A2RUB6 948 aa13.55□□□□□ -0.24
PCAT29-201ENST00000558411 FAM177BA6PVY3 158 aa13.55□□□□□ -0.24
PCAT29-201ENST00000558411 GOLGA6L6A8MZA4 724 aa13.55□□□□□ -0.24
PCAT29-201ENST00000558411 MX1P20591 662 aa13.55□□□□□ -0.24
PCAT29-201ENST00000558411 WDR33Q9C0J8 1336 aaKnown RBP13.54□□□□□ -0.24
PCAT29-201ENST00000558411 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
PCAT29-201ENST00000558411 FAM193AP78312 1265 aa13.54□□□□□ -0.24
PCAT29-201ENST00000558411 SLC20A2Q08357 652 aa13.54□□□□□ -0.24
PCAT29-201ENST00000558411 CGNQ9P2M7 1197 aaKnown RBP13.54□□□□□ -0.24
PCAT29-201ENST00000558411 CTNNA3Q9UI47 895 aa13.54□□□□□ -0.24
PCAT29-201ENST00000558411 RTL1A6NKG5 1358 aa13.54□□□□□ -0.24
PCAT29-201ENST00000558411 ZBTB7CA1YPR0 619 aa13.54□□□□□ -0.24
PCAT29-201ENST00000558411 IL17RAQ96F46 866 aa13.54□□□□□ -0.24
PCAT29-201ENST00000558411 DDX41Q9UJV9 622 aaKnown RBP13.54□□□□□ -0.24
PCAT29-201ENST00000558411 ASXL2Q76L83 1435 aa13.53□□□□□ -0.24
PCAT29-201ENST00000558411 PPLO60437 1756 aa13.53□□□□□ -0.24
PCAT29-201ENST00000558411 NEK4P51957 841 aa13.53□□□□□ -0.24
PCAT29-201ENST00000558411 ANAPC15P60006 121 aa13.53□□□□□ -0.24
PCAT29-201ENST00000558411 NCBP1Q09161 790 aaKnown RBP13.53□□□□□ -0.24
PCAT29-201ENST00000558411 USP48Q86UV5 1035 aa13.53□□□□□ -0.24
PCAT29-201ENST00000558411 MORC2Q9Y6X9 1032 aaPredicted RBP13.53□□□□□ -0.24
PCAT29-201ENST00000558411 UGGT1Q9NYU2 1555 aa13.53□□□□□ -0.24
PCAT29-201ENST00000558411 ABCA9Q8IUA7 1624 aa13.53□□□□□ -0.24
PCAT29-201ENST00000558411 TULP4Q9NRJ4 1543 aa13.52□□□□□ -0.24
PCAT29-201ENST00000558411 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.24
PCAT29-201ENST00000558411 EFCAB2Q5VUJ9 269 aa13.52□□□□□ -0.24
PCAT29-201ENST00000558411 FOXD4L5Q5VV16 416 aaPredicted RBP13.52□□□□□ -0.24
PCAT29-201ENST00000558411 ANKRD44Q8N8A2 993 aa13.52□□□□□ -0.24
PCAT29-201ENST00000558411 FOXD4L4Q8WXT5 416 aaPredicted RBP13.52□□□□□ -0.24
PCAT29-201ENST00000558411 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.24
PCAT29-201ENST00000558411 EVC2Q86UK5 1308 aa13.52□□□□□ -0.24
PCAT29-201ENST00000558411 PNPLA6Q8IY17 1366 aa13.52□□□□□ -0.25
PCAT29-201ENST00000558411 SMTNL1A8MU46 457 aa13.52□□□□□ -0.25
PCAT29-201ENST00000558411 SLFN14P0C7P3 912 aa13.52□□□□□ -0.25
PCAT29-201ENST00000558411 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
PCAT29-201ENST00000558411 RPAP2Q8IXW5 612 aaPredicted RBP13.52□□□□□ -0.25
PCAT29-201ENST00000558411 C14orf93Q9H972 538 aaKnown RBP13.52□□□□□ -0.25
PCAT29-201ENST00000558411 EFCAB6Q5THR3 1501 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 RGS12O14924 1447 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 FAM135BQ49AJ0 1406 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 FCHSD2O94868 740 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 CREBRFQ8IUR6 639 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 FUCA2Q9BTY2 467 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 PYCARDQ9ULZ3 195 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 RPAP1Q9BWH6 1393 aaPredicted RBP13.51□□□□□ -0.25
PCAT29-201ENST00000558411 ATP10DQ9P241 1426 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
PCAT29-201ENST00000558411 MCCP23508 829 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 MPNDQ8N594 471 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 TRAK1Q9UPV9 953 aa13.51□□□□□ -0.25
PCAT29-201ENST00000558411 SPAG9O60271 1321 aaKnown RBP13.5□□□□□ -0.25
PCAT29-201ENST00000558411 DIAPH1O60610 1272 aaKnown RBP13.5□□□□□ -0.25
PCAT29-201ENST00000558411 UBE2HP62256 183 aa13.5□□□□□ -0.25
PCAT29-201ENST00000558411 C16orf71Q8IYS4 520 aaPredicted RBP13.5□□□□□ -0.25
PCAT29-201ENST00000558411 OSBPL3Q9H4L5 887 aa13.5□□□□□ -0.25
PCAT29-201ENST00000558411 IFT57Q9NWB7 429 aa13.5□□□□□ -0.25
PCAT29-201ENST00000558411 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
PCAT29-201ENST00000558411 MROH1Q8NDA8 1641 aa13.5□□□□□ -0.25
PCAT29-201ENST00000558411 SSH2Q76I76 1423 aa13.5□□□□□ -0.25
PCAT29-201ENST00000558411 GNAI1P63096 354 aa13.49□□□□□ -0.25
PCAT29-201ENST00000558411 PAXBP1Q9Y5B6 917 aa13.49□□□□□ -0.25
PCAT29-201ENST00000558411 ZFYVE9O95405 1425 aa13.49□□□□□ -0.25
PCAT29-201ENST00000558411 TUBGCP6Q96RT7 1819 aa13.49□□□□□ -0.25
PCAT29-201ENST00000558411 ARAP3Q8WWN8 1544 aa13.49□□□□□ -0.25
PCAT29-201ENST00000558411 TCHHQ07283 1943 aa13.49□□□□□ -0.25
PCAT29-201ENST00000558411 GLI2P10070 1586 aa13.48□□□□□ -0.25
PCAT29-201ENST00000558411 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
PCAT29-201ENST00000558411 IGSF3O75054 1194 aa13.48□□□□□ -0.25
PCAT29-201ENST00000558411 TERF2Q15554 542 aa13.48□□□□□ -0.25
PCAT29-201ENST00000558411 TIGD1Q96MW7 591 aa13.48□□□□□ -0.25
PCAT29-201ENST00000558411 DNAJC2Q99543 621 aaKnown RBP13.48□□□□□ -0.25
PCAT29-201ENST00000558411 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
PCAT29-201ENST00000558411 EPB41L2O43491 1005 aaKnown RBP13.47□□□□□ -0.25
PCAT29-201ENST00000558411 SMARCA5O60264 1052 aaPredicted RBP13.47□□□□□ -0.25
PCAT29-201ENST00000558411 ZNF853P0CG23 659 aa13.47□□□□□ -0.25
PCAT29-201ENST00000558411 IRX5P78411 483 aaPredicted RBP13.47□□□□□ -0.25
PCAT29-201ENST00000558411 KIF18AQ8NI77 898 aa13.47□□□□□ -0.25
PCAT29-201ENST00000558411 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
PCAT29-201ENST00000558411 ARHGEF40Q8TER5 1519 aa13.47□□□□□ -0.25
PCAT29-201ENST00000558411 A0A1W2PP64 1363 aa13.46□□□□□ -0.25
PCAT29-201ENST00000558411 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.25
PCAT29-201ENST00000558411 FRMPD1Q5SYB0 1578 aa13.46□□□□□ -0.25
PCAT29-201ENST00000558411 LMTK2Q8IWU2 1503 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms